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Oryza sativa
cluster # 9024 cluster # 9024       Sequences # 6       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9024#0 length = 3161 sequences # 4  
 consensus_9024#1 length = 627 sequences # 1  
consensus_9024#2 length = 325 sequences # 1  
consensusID : consensus_9024#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 3161
fasta sequence 
                              [AACCCCATCAGTCTGCTGCGGCCATAGCGAACTGTAGGGTAGCTTCGCCTT--A--TGGCGCTCGCTAGGGTTTCTCCCCCCGCGTTCTCCTCCCCCTTCCTGATCCATTCCTTACTGCGCCCCTTCTCTTCGCCCTCCTCCGTCTTGCGCCCTCGCGTGACTCGCGTCCCCCACCACCGAGGCTTCGCCATCGCCGCCGCCTTATCTCAGGCCTCTCCGCTTCCCTCTGCGGACGGGGATGGGGCGGTGATGGAGGCGCCGCCGCGGCCGAGCTCCAGGCGCCCATGGAAGCCCACGTGCCTGTACTACACCCAGGGGAAATGCACCATGTTGAATGATACTTTGCATCTTGAG-AAATTCAATCACAATCTGCCAACAGACCTTCCAGTGAATTATTCAGCTGCAGATAAAGTGAAATCTCAGAAATTGGATTACTTTTTGGTCCTTGATTTGGAAGGTAAGGTTGAAATTCTTGAATTCCCAGTTGTAATGATTGATGCCCAAAGCATGGAGTTCGTCGATTCATTTCACAGGGTATAGCCCATCTGTACATTAATAGTTATTGAAATATTCTTCTCAATACATAAGACTATTTGAATGATTACCAAACTCGCCCCCAAACATAGATGAGTTTTGCAACTTTTATTTCTCTAATTTCTTGTGAATATTCTTTGGTGGTAATATAGTTCTTTATTAGTTTAAATACAGAAGGTTTAGCTTTGTATGGTTCTCATTTCACTCAGTTGAGCACCAAGAACTATTATCAAGATTAGTGAGAAATTTAATCGAAGAACTATGAGATTAAGATTTAAGATGCAATATTTGAATCCCTTTTGTGGAATATGTTGTCTTTTTTACTTCGATTTTTTTTTTTTGAAAATATGTTCACTCATTCTGACTTACCGATATTATACTTCCCTCAACCATCTAAGGATCCTGCCTCTCTTTTGCAACTCGTTTGTTAGAGTGTTTTTCTCTTTTCCCGTCACTCTACTCAAGGCTAGTTGATCATCAAACTTCCCACAAGACCATCTCTTACGGAGAAAATTCTTGAAAACTTATGCAAATTTATAGTTTTCAAAGCTTTCAACAAAAAAGGGGCACTTAAGAGAAATCATAAATTCCTGTAAGAACTTTTTACAACACAATTGAGGAATATTGAAAATTTTTCATTATTTCAACATATATATTTGAGGAAAATTTGATGTAACTATACTATTCGAAAGCGCCTCAATCATTTCAATTTTCATGCGGTGAACCTAAAAAAGTTCTCTAGGGTATTTTTATTTGTGAAATTATGAAAGATTTGTTTCAGGGTAATCCATGATCTTTTTCAGGATTTTTGTATTCTTTTTCGATTTTTTATTAAGTTAACTTCATAACGGCATTATTCTTAAAAGTAAATTTGGTTGTAACCAGTGTTGACTGAGCATGGATGCCAAAAAGGAGAGATTTAGTGGTTTAGTAACGGAAGAGGGGCAAGGAGAGGTTTACTGTTGACTGAACAGGGATGGTAGAAAACATAATATAGTCTTAAAACTCGCAATGAATGGCAAAATTAAAATTTCAGTATATTGTTCTGTTTCATACAGGAGAGCCCATGCTGGTTGAGATGTGTAATAATTGAGTGAATTAAAACATATAAGCATATAACTGAATACAAATTAAATTTTTAGGAAGTACATTTTATGACTAGATGGATGCACATAAACCGCTACAATTGGAAATTTTGCAACAGCTATACTGCAGCTAGAGTGTGTCTAGGGATTCATGGACAAACAACAGAACCAAAAATATTTTTCCTGGTTTTACTTTTCTGTTCTTATCCAATGGTTCTGCATGACTCAAGTTCTTAATTTCCTCCCAAAAATATCCTTTTGAATTTCTACTTTCTAAAAGAAAGAATCAAGGTCCTGAATTTACATGCTGTTTGTTCTTTGCAAAATCTAAAAACCATAGGATATCAATATCATGAATATGGGCAATGCATGTTTGGTTGAGTGCCAACCTTTGCTAAACTTGTGGCAACCAAGTTTGACCAACTAAGGCTAGCGTTTGGTTCATGCCACAAGTGAGTTATGCCACACTTTCTGTTAGCTGGTCCACTTGTCATAGAGTGAATTTTTTGCCACAACTTGTCACAATTGTGGCCAACAAATTCTTGGCCACACAATGTGCGGCATGCCACACGCCAAATATATTGTTATGGAACCATCCAAACAGCCCATATATACCACACATGCAGAAAATATCCTCTAAAGACATGCCATTTTAGCTGGTGTCATGGGCATTGGGCTTAGAGGCGACCCACTGGACAGCCCAATACATGGTGTGTGAATAATACTCGCATGATAGTGTAGCATTTGTTACAGTCAGACAAATTATATCAGCTGTTTCTTTCTTGTGTGATGCTGTAAGTTTGAATAGACATCTAAATATTTTAAATAAGTGAGAAAAATGTGACACTGTAACATTGTATAACTTAGTATATGCAATATTTCATATTGTTTTATTCGTTTGTGATGTTAATCCTTTCTGTATTTTCTTGCCTTTTCAGTAATATCAGTTACTATCTCTATCCCCTCGTGTGTTGCTTGTAGGTTTGTACACCCTACTGCGATGAGTGAGCAAAGAATAAGAGAATATATTGAAGGGAAATATGGGAAATTTGGAGTTGACCGGTATTTGTAGCACTATTTAACTCTGTTTCTCACTGCAGAATAACTTGTTTGATGATTTGATCGTAATTTTCAGTAGCTATACATCATTAACTATTTTGCTGTTAAAGCGGGAGTCGTTTTTTTTTTCCTTAACATAGGTTCAGTTAGTCTTATCATGAATGTAACCCATGAATTGGCTGGTTATATGGATACATCTAGAGGCGAATCAAACCCTTTAGCTTGTAAAATTTCTAGATTCTTCAGTTGTCTTATTTATCATTTTCTTTATGAGTTTGTAACTTCAGTTTGTGATGTTCTAAACTGTATCCACTGGTCTAGGTTTAATCTAGTTTGGTTTGCTTTATTTCTTGTATAAAATGTTCTATATATTTTATTTCTTGATTGCATTCCTTCTTATGGATTGAGTTTTGTATACCACTATCCTTTTGGTAAAACTGTGTTTTGTCATCAACCCATCTTCATTAGTCACCTGTATTTTATGCA]

[+] EMBL AK120298             [AACCCCATCAGTCTGCTGCGGCCATAGCGAACTGTAGGGTAGCTTCGCCTT  A  TGGCGCTCGCTAGGGTTTCTCCCCCCGCGTTCTCCTCCCCCTTCCTGATCCATTCCTTACTGCGCCCCTTCTCTTCGCCCTCCTCCGTCTTGCGCCCTCGCGTGACTCGCGTCCCCCACCACCGAGGCTTCGCCATCGCCGCCGCCTTATCTCAGGCCTCTCCGCTTCCCTCTGCGGACGGGGATGGGGCGGTGATGGAGGCGCCGCCGCGGCCGAGCTCCAGGCGCCCATGGAAGCCCACGTGCCTGTACTACACCCAGGGGAAATGCACCATGTTGAATGATACTTTGCATCTTGAG AAATTCAATCACAATCTGCCAACAGACCTTCCAGTGAATTATTCAGCTGCAGATAAAGTGAAATCTCAGAAATTGGATTACTTTTTGGTCCTTGATTTGGAAGGTAAGGTTGAAATTCTTGAATTCCCAGTTGTAATGATTGATGCCCAAAGCATGGAGTTCGTCGATTCATTTCACAGGGTATAGCCCATCTGTACATTAATAGTTATTGAAATATTCTTCTCAATACATAAGACTATTTGAATGATTACCAAACTCGCCCCCAAACATAGATGAGTTTTGCAACTTTTATTTCTCTAATTTCTTGTGAATATTCTTTGGTGGTAATATAGTTCTTTATTAGTTTAAATACAGAAGGTTTAGCTTTGTATGGTTCTCATTTCACTCAGTTGAGCACCAAGAACTATTATCAAGATTAGTGAGAAATTTAATCGAAGAACTATGAGATTAAGATTTAAGATGCAATATTTGAATCCCTTTTGTGGAATATGTTGTCTTTTTTACTTCGATTTTTTTTTTTTGAAAATATGTTCACTCATTCTGACTTACCGATATTATACTTCCCTCAACCATCTAAGGATCCTGCCTCTCTTTTGCAACTCGTTTGTTAGAGTGTTTTTCTCTTTTCCCGTCACTCTACTCAAGGCTAGTTGATCATCAAACTTCCCACAAGACCATCTCTTACGGAGAAAATTCTTGAAAACTTATGCAAATTTATAGTTTTCAAAGCTTTCAACAAAAAAGGGGCACTTAAGAGAAATCATAAATTCCTGTAAGAACTTTTTACAACACAATTGAGGAATATTGAAAATTTTTCATTATTTCAACATATATATTTGAGGAAAATTTGATGTAACTATACTATTCGAAAGCGCCTCAATCATTTCAATTTTCATGCGGTGAACCTAAAAAAGTTCTCTAGGGTATTTTTATTTGTGAAATTATGAAAGATTTGTTTCAGGGTAATCCATGATCTTTTTCAGGATTTTTGTATTCTTTTTCGATTTTTTATTAAGTTAACTTCATAACGGCATTATTCTTAAAAGTAAATTTGGTTGTAACCAGTGTTGACTGAGCATGGATGCCAAAAAGGAGAGATTTAGTGGTTTAGTAACGGAAGAGGGGCAAGGAGAGGTTTACTGTTGACTGAACAGGGATGGTAGAAAACATAATATAGTCTTAAAACTCGCAATGAATGGCAAAATTAAAATTTCAGTATATTGTTCTGTTTCATACAGGAGAGCCCATGCTGGTTGAGATGTGTAATAATTGAGTGAATTAAAACATATAAGCATATAACTGAATACAAATTAAATTTTTAGGAAGTACATTTTATGACTAGATGGATGCACATAAACCGCTACAATTGGAAATTTTGCAACAGCTATACTGCAGCTAGAGTGTGTCTAGGGATTCATGGACAAACAACAGAACCAAAAATATTTTTCCTGGTTTTACTTTTCTGTTCTTATCCAATGGTTCTGCATGACTCAAGTTCTTAATTTCCTCCCAAAAATATCCTTTTGAATTTCTACTTTCTAAAAGAAAGAATCAAGGTCCTGAATTTACATGCTGTTTGTTCTTTGCAAAATCTAAAAACCATAGGATATCAATATCATGAATATGGGCAATGCATGTTTGGTTGAGTGCCAACCTTTGCTAAACTTGTGGCAACCAAGTTTGACCAACTAAGGCTAGCGTTTGGTTCATGCCACAAGTGAGTTATGCCACACTTTCTGTTAGCTGGTCCACTTGTCATAGAGTGAATTTTTTGCCACAACTTGTCACAATTGTGGCCAACAAATTCTTGGCCACACAATGTGCGGCATGCCACACGCCAAATATATTGTTATGGAACCATCCAAACAGCCCATATATACCACACATGCAGAAAATATCCTCTAAAGACATGCCATTTTAGCTGGTGTCATGGGCATTGGGCTTAGAGGCGACCCACTGGACAGCCCAATACATGGTGTGTGAATAATACTCGCATGATAGTGTAGCATTTGTTACAGTCAGACAAATTATATCAGCTGTTTCTTTCTTGTGTGATGCTGTAAGTTTGAATAGACATCTAAATATTTTAAATAAGTGAGAAAAATGTGACACTGTAACATTGTATAACTTAGTATATGCAATATTTCATATTGTTTTATTCGTTTGTGATGTTAATCCTTTCTGTATTTTCTTGCCTTTTCAGTAATATCAGTTACTATCTCTATCCCCTCGTGTGTTGCTTGTAGGTTTGTACACCCTACTGCGATGAGTGAGCAAAGAATAAGAGAATATATTGAAGGGAAATATGGGAAATTTGGAGTTGACCGGTATTTGTAGCACTATTTAACTCTGTTTCTCACTGCAGAATAACTTGTTTGATGATTTGATCGTAATTTTCAGTAGCTATACATCATTAACTATTTTGCTGTTAAAGCGGGAGTCGTTTTTTTTTTCCTTAACATAGGTTCAGTTAGTCTTATCATGAATGTAACCCATGAATTGGCTGGTTATATGGATACATCTAGAGGCGAATCAAACCCTTTAGCTTGTAAAATTTCTAGATTCTTCAGTTGTCTTATTTATCATTTTCTTTATGAGTTTGTAACTTCAGTTTGTGATGTTCTAAACTGTATCCACTGGTCTAGGTTTAATCTAGTTTGGTTTGCTTTATTTCTTGTATAAAATGTTCTATATATTTTATTTCTTGATTGCATTCCTTCTTATGGATTGAGTTTTGTATACCACTATCCTTTTGGTAAAACTGTGTTTTGTCATCAACCCATCTTCATTAGTCACCTGTATTTTATGCA]
[+] EMBL OSC28051             [              GCTGCGGCCATAGCGAACTGTAGGGTAGCTTCGCCTTAGA  TGGCGCTCGCTAGGGTTTCTCCCCCCGCGTTCTCCTCCCCCTTCCTGATCCATTCCTTACTGCGCCCCTTCTCTTCGCCCTCCTCCGTCTTGCGCCCTCGCGTGACTCGCGTCCCCCACCACCGAGGCTTCGACATCGTCGACGACTTATNTCAGGCCTNTCCGNTTNCCTCTGCGGACGGGGATGGGGCGGTGATGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL OSC27921             [              gnTGCGGCCATAGCGNACTGTAGGGTAGCTTCGNCTT  AGNTGGCGCTCGCTAGGGTTTCTCCCCCCGCGTTCTCCTCCCCCTTCCTGATCCATTCCTTACTGCGCCCCTTCTCTTCGCCCTCCTCCGTCTTGCGCCCTCGCGTGACTCGCGTCCCCCACCACCGAGGCTTCGCCATCGCCGCCGCCTTATCTCAGGCCTATCCGCTTCCCTCTGCGGACGNGGATGGGGCGGTGATGGAGGCGTCGNCGNGGNCGAGCTCCAGGCGCCCATGGAAGNCCACGTGACTNTACTACACCCAGGGGAAATGCACCATGTTGAATGCTACTTTGCATCTTGAGAAAATTNAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CF306672             [                           CGAACTGTAGGGTAGCTTCGCCTTAGA  TGGCGCTCGCTAGGGTTTCTCCCCCCGCGTTCTCCTCCCCCTTCCTGATCCATTCCTTACTGCGCCCCTTCTCTTCGCCCTCCTCCGTCTTGCGCCCTCGCGTGACTCGCGTCCCCCACCACCGAGGCTTCGCCATCGCCGCCGCCTTATCTCAGGCCTCTCCGCTTCCCTCTGCGGACGGGGATGGGGCGGTGATGGAGGCGCCGCCGCGGCCGAGCTCCACGCGCCCATGGAAGCCCACGTGCCTGTACTACACCCAGGGGAAATGCACCATGTTGAATGATACTTTGCATCTTGAG AAATTCAATCACAATCTGCCAACAGACCTTCCAGTGAATTATTCAGCTGCAGACAAAGTGAAATCTCAGAAATTGGATCACTTTTTGGTCCTTGATTCGGAAGGTAAGGTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]




>consensus_9024#0
AACCCCATCAGTCTGCTGCGGCCATAGCGAACTGTAGGGTAGCTTCGCCTTATGGCGCTC
GCTAGGGTTTCTCCCCCCGCGTTCTCCTCCCCCTTCCTGATCCATTCCTTACTGCGCCCC
TTCTCTTCGCCCTCCTCCGTCTTGCGCCCTCGCGTGACTCGCGTCCCCCACCACCGAGGC
TTCGCCATCGCCGCCGCCTTATCTCAGGCCTCTCCGCTTCCCTCTGCGGACGGGGATGGG
GCGGTGATGGAGGCGCCGCCGCGGCCGAGCTCCAGGCGCCCATGGAAGCCCACGTGCCTG
TACTACACCCAGGGGAAATGCACCATGTTGAATGATACTTTGCATCTTGAGAAATTCAAT
CACAATCTGCCAACAGACCTTCCAGTGAATTATTCAGCTGCAGATAAAGTGAAATCTCAG
AAATTGGATTACTTTTTGGTCCTTGATTTGGAAGGTAAGGTTGAAATTCTTGAATTCCCA
GTTGTAATGATTGATGCCCAAAGCATGGAGTTCGTCGATTCATTTCACAGGGTATAGCCC
ATCTGTACATTAATAGTTATTGAAATATTCTTCTCAATACATAAGACTATTTGAATGATT
ACCAAACTCGCCCCCAAACATAGATGAGTTTTGCAACTTTTATTTCTCTAATTTCTTGTG
AATATTCTTTGGTGGTAATATAGTTCTTTATTAGTTTAAATACAGAAGGTTTAGCTTTGT
ATGGTTCTCATTTCACTCAGTTGAGCACCAAGAACTATTATCAAGATTAGTGAGAAATTT
AATCGAAGAACTATGAGATTAAGATTTAAGATGCAATATTTGAATCCCTTTTGTGGAATA
TGTTGTCTTTTTTACTTCGATTTTTTTTTTTTGAAAATATGTTCACTCATTCTGACTTAC
CGATATTATACTTCCCTCAACCATCTAAGGATCCTGCCTCTCTTTTGCAACTCGTTTGTT
AGAGTGTTTTTCTCTTTTCCCGTCACTCTACTCAAGGCTAGTTGATCATCAAACTTCCCA
CAAGACCATCTCTTACGGAGAAAATTCTTGAAAACTTATGCAAATTTATAGTTTTCAAAG
CTTTCAACAAAAAAGGGGCACTTAAGAGAAATCATAAATTCCTGTAAGAACTTTTTACAA
CACAATTGAGGAATATTGAAAATTTTTCATTATTTCAACATATATATTTGAGGAAAATTT
GATGTAACTATACTATTCGAAAGCGCCTCAATCATTTCAATTTTCATGCGGTGAACCTAA
AAAAGTTCTCTAGGGTATTTTTATTTGTGAAATTATGAAAGATTTGTTTCAGGGTAATCC
ATGATCTTTTTCAGGATTTTTGTATTCTTTTTCGATTTTTTATTAAGTTAACTTCATAAC
GGCATTATTCTTAAAAGTAAATTTGGTTGTAACCAGTGTTGACTGAGCATGGATGCCAAA
AAGGAGAGATTTAGTGGTTTAGTAACGGAAGAGGGGCAAGGAGAGGTTTACTGTTGACTG
AACAGGGATGGTAGAAAACATAATATAGTCTTAAAACTCGCAATGAATGGCAAAATTAAA
ATTTCAGTATATTGTTCTGTTTCATACAGGAGAGCCCATGCTGGTTGAGATGTGTAATAA
TTGAGTGAATTAAAACATATAAGCATATAACTGAATACAAATTAAATTTTTAGGAAGTAC
ATTTTATGACTAGATGGATGCACATAAACCGCTACAATTGGAAATTTTGCAACAGCTATA
CTGCAGCTAGAGTGTGTCTAGGGATTCATGGACAAACAACAGAACCAAAAATATTTTTCC
TGGTTTTACTTTTCTGTTCTTATCCAATGGTTCTGCATGACTCAAGTTCTTAATTTCCTC
CCAAAAATATCCTTTTGAATTTCTACTTTCTAAAAGAAAGAATCAAGGTCCTGAATTTAC
ATGCTGTTTGTTCTTTGCAAAATCTAAAAACCATAGGATATCAATATCATGAATATGGGC
AATGCATGTTTGGTTGAGTGCCAACCTTTGCTAAACTTGTGGCAACCAAGTTTGACCAAC
TAAGGCTAGCGTTTGGTTCATGCCACAAGTGAGTTATGCCACACTTTCTGTTAGCTGGTC
CACTTGTCATAGAGTGAATTTTTTGCCACAACTTGTCACAATTGTGGCCAACAAATTCTT
GGCCACACAATGTGCGGCATGCCACACGCCAAATATATTGTTATGGAACCATCCAAACAG
CCCATATATACCACACATGCAGAAAATATCCTCTAAAGACATGCCATTTTAGCTGGTGTC
ATGGGCATTGGGCTTAGAGGCGACCCACTGGACAGCCCAATACATGGTGTGTGAATAATA
CTCGCATGATAGTGTAGCATTTGTTACAGTCAGACAAATTATATCAGCTGTTTCTTTCTT
GTGTGATGCTGTAAGTTTGAATAGACATCTAAATATTTTAAATAAGTGAGAAAAATGTGA
CACTGTAACATTGTATAACTTAGTATATGCAATATTTCATATTGTTTTATTCGTTTGTGA
TGTTAATCCTTTCTGTATTTTCTTGCCTTTTCAGTAATATCAGTTACTATCTCTATCCCC
TCGTGTGTTGCTTGTAGGTTTGTACACCCTACTGCGATGAGTGAGCAAAGAATAAGAGAA
TATATTGAAGGGAAATATGGGAAATTTGGAGTTGACCGGTATTTGTAGCACTATTTAACT
CTGTTTCTCACTGCAGAATAACTTGTTTGATGATTTGATCGTAATTTTCAGTAGCTATAC
ATCATTAACTATTTTGCTGTTAAAGCGGGAGTCGTTTTTTTTTTCCTTAACATAGGTTCA
GTTAGTCTTATCATGAATGTAACCCATGAATTGGCTGGTTATATGGATACATCTAGAGGC
GAATCAAACCCTTTAGCTTGTAAAATTTCTAGATTCTTCAGTTGTCTTATTTATCATTTT
CTTTATGAGTTTGTAACTTCAGTTTGTGATGTTCTAAACTGTATCCACTGGTCTAGGTTT
AATCTAGTTTGGTTTGCTTTATTTCTTGTATAAAATGTTCTATATATTTTATTTCTTGAT
TGCATTCCTTCTTATGGATTGAGTTTTGTATACCACTATCCTTTTGGTAAAACTGTGTTT
TGTCATCAACCCATCTTCATTAGTCACCTGTATTTTATGCA

consensusID : consensus_9024#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 627
fasta sequence 
                              [TAGCGAACTGTAGGGTAGCTTCGCCTTAGATGGCGCTCGCTAGGGTTTCTCCCCCCGCGTTCTCCTCCCCCTTCCTGATCCATTCCTTACTGCGCCCCTTCTCTTCGCCCTCCTCCGTCTTGCGCCCTCGCGTGACTCGCGTCCCCCACCACCGAGGCTTCGCCATCGCCGCCGCCTTATCTCAGGCCTCTCCGCTTCCCTCTGCGGACGGGGATGGGGCGGTGATGGAGGCGCCGCCGCGGCCGAGCTCCAGGCGCCCATGGAAGCCCACGTGCCTGTACTACACCCAGGGGAAATGCACCATGGTGGGATTTTCCTTCCCTTTCTCGCGATTCACTGTCGTTTGGTTAATGTAATTTTCTGTTGCCCCTTGTGACCTGCGGTTCAGGTGGGTTGGATACCGTATCAATAGGTTAGATTCAGGTTCAGGTGGGTGGGTACCGTATCAATTAGGTTAGATTCAGTGCATGAGTTAATAATTAAATATGAGGATGTGAGTTTGAACTTGATGCTGGGAGAAGATAATCTCTTGTGGAGTTGTTGTTATTTTGTGGAGAAGTATAATAGTATTGATTAGTAAAACCTTAGCCTTGTAGGAGCGTCAAATTATAACAATGCCTGTATCCT]

[+] EMBL AK071268             [TAGCGAACTGTAGGGTAGCTTCGCCTTAGATGGCGCTCGCTAGGGTTTCTCCCCCCGCGTTCTCCTCCCCCTTCCTGATCCATTCCTTACTGCGCCCCTTCTCTTCGCCCTCCTCCGTCTTGCGCCCTCGCGTGACTCGCGTCCCCCACCACCGAGGCTTCGCCATCGCCGCCGCCTTATCTCAGGCCTCTCCGCTTCCCTCTGCGGACGGGGATGGGGCGGTGATGGAGGCGCCGCCGCGGCCGAGCTCCAGGCGCCCATGGAAGCCCACGTGCCTGTACTACACCCAGGGGAAATGCACCATGGTGGGATTTTCCTTCCCTTTCTCGCGATTCACTGTCGTTTGGTTAATGTAATTTTCTGTTGCCCCTTGTGACCTGCGGTTCAGGTGGGTTGGATACCGTATCAATAGGTTAGATTCAGGTTCAGGTGGGTGGGTACCGTATCAATTAGGTTAGATTCAGTGCATGAGTTAATAATTAAATATGAGGATGTGAGTTTGAACTTGATGCTGGGAGAAGATAATCTCTTGTGGAGTTGTTGTTATTTTGTGGAGAAGTATAATAGTATTGATTAGTAAAACCTTAGCCTTGTAGGAGCGTCAAATTATAACAATGCCTGTATCCT]




>consensus_9024#1
TAGCGAACTGTAGGGTAGCTTCGCCTTAGATGGCGCTCGCTAGGGTTTCTCCCCCCGCGT
TCTCCTCCCCCTTCCTGATCCATTCCTTACTGCGCCCCTTCTCTTCGCCCTCCTCCGTCT
TGCGCCCTCGCGTGACTCGCGTCCCCCACCACCGAGGCTTCGCCATCGCCGCCGCCTTAT
CTCAGGCCTCTCCGCTTCCCTCTGCGGACGGGGATGGGGCGGTGATGGAGGCGCCGCCGC
GGCCGAGCTCCAGGCGCCCATGGAAGCCCACGTGCCTGTACTACACCCAGGGGAAATGCA
CCATGGTGGGATTTTCCTTCCCTTTCTCGCGATTCACTGTCGTTTGGTTAATGTAATTTT
CTGTTGCCCCTTGTGACCTGCGGTTCAGGTGGGTTGGATACCGTATCAATAGGTTAGATT
CAGGTTCAGGTGGGTGGGTACCGTATCAATTAGGTTAGATTCAGTGCATGAGTTAATAAT
TAAATATGAGGATGTGAGTTTGAACTTGATGCTGGGAGAAGATAATCTCTTGTGGAGTTG
TTGTTATTTTGTGGAGAAGTATAATAGTATTGATTAGTAAAACCTTAGCCTTGTAGGAGC
GTCAAATTATAACAATGCCTGTATCCT

consensusID : consensus_9024#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 325
fasta sequence 
                              [CCTTTTTAANCTTGGTNTCCTGGGCCTTGGGGCTTAANGGGCCGACCCCCTTGGCCAGCCCAAAAACCATGGTGTGNGNAAAAANACTCGCATGATAGTGTAGCATTTGTTNCAGTCAGACAAAATTATATCAGCTGTTTCTTTCTTGTGTGATGCTGTAAGTTTGAATAGACATCTAAATATTTTAAATAAGTGAGAAAAATGTGACACTGTAACATTGTATAACTTAGTATATGCAATATTTCATATTGTTTTATTCGTTTGTAACAATTGTAGATGTTAATCCTTTCTGTATTTTCTTGCCTTTTCAGTAATATCAGTTACT]

[-] EMBL CA765439             [CCTTTTTAANCTTGGTNTCCTGGGCCTTGGGGCTTAANGGGCCGACCCCCTTGGCCAGCCCAAAAACCATGGTGTGNGNAAAAANACTCGCATGATAGTGTAGCATTTGTTNCAGTCAGACAAAATTATATCAGCTGTTTCTTTCTTGTGTGATGCTGTAAGTTTGAATAGACATCTAAATATTTTAAATAAGTGAGAAAAATGTGACACTGTAACATTGTATAACTTAGTATATGCAATATTTCATATTGTTTTATTCGTTTGTAACAATTGTAGATGTTAATCCTTTCTGTATTTTCTTGCCTTTTCAGTAATATCAGTTACT]




>consensus_9024#2
CCTTTTTAANCTTGGTNTCCTGGGCCTTGGGGCTTAANGGGCCGACCCCCTTGGCCAGCC
CAAAAACCATGGTGTGNGNAAAAANACTCGCATGATAGTGTAGCATTTGTTNCAGTCAGA
CAAAATTATATCAGCTGTTTCTTTCTTGTGTGATGCTGTAAGTTTGAATAGACATCTAAA
TATTTTAAATAAGTGAGAAAAATGTGACACTGTAACATTGTATAACTTAGTATATGCAAT
ATTTCATATTGTTTTATTCGTTTGTAACAATTGTAGATGTTAATCCTTTCTGTATTTTCT
TGCCTTTTCAGTAATATCAGTTACT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9024#0      AACCCCATCAGTCTGCTGCGGCCATAGCGAACTGTAGGGTAGCTTCGCCTTATGGCGCTC 60
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      GCTAGGGTTTCTCCCCCCGCGTTCTCCTCCCCCTTCCTGATCCATTCCTTACTGCGCCCC 120
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      TTCTCTTCGCCCTCCTCCGTCTTGCGCCCTCGCGTGACTCGCGTCCCCCACCACCGAGGC 180
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      TTCGCCATCGCCGCCGCCTTATCTCAGGCCTCTCCGCTTCCCTCTGCGGACGGGGATGGG 240
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      GCGGTGATGGAGGCGCCGCCGCGGCCGAGCTCCAGGCGCCCATGGAAGCCCACGTGCCTG 300
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      TACTACACCCAGGGGAAATGCACCATGTTGAATGATACTTTGCATCTTGAGAAATTCAAT 360
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      CACAATCTGCCAACAGACCTTCCAGTGAATTATTCAGCTGCAGATAAAGTGAAATCTCAG 420
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      AAATTGGATTACTTTTTGGTCCTTGATTTGGAAGGTAAGGTTGAAATTCTTGAATTCCCA 480
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      GTTGTAATGATTGATGCCCAAAGCATGGAGTTCGTCGATTCATTTCACAGGGTATAGCCC 540
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      ATCTGTACATTAATAGTTATTGAAATATTCTTCTCAATACATAAGACTATTTGAATGATT 600
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      ACCAAACTCGCCCCCAAACATAGATGAGTTTTGCAACTTTTATTTCTCTAATTTCTTGTG 660
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      AATATTCTTTGGTGGTAATATAGTTCTTTATTAGTTTAAATACAGAAGGTTTAGCTTTGT 720
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      ATGGTTCTCATTTCACTCAGTTGAGCACCAAGAACTATTATCAAGATTAGTGAGAAATTT 780
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      AATCGAAGAACTATGAGATTAAGATTTAAGATGCAATATTTGAATCCCTTTTGTGGAATA 840
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      TGTTGTCTTTTTTACTTCGATTTTTTTTTTTTGAAAATATGTTCACTCATTCTGACTTAC 900
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      CGATATTATACTTCCCTCAACCATCTAAGGATCCTGCCTCTCTTTTGCAACTCGTTTGTT 960
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      AGAGTGTTTTTCTCTTTTCCCGTCACTCTACTCAAGGCTAGTTGATCATCAAACTTCCCA 1020
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      CAAGACCATCTCTTACGGAGAAAATTCTTGAAAACTTATGCAAATTTATAGTTTTCAAAG 1080
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      CTTTCAACAAAAAAGGGGCACTTAAGAGAAATCATAAATTCCTGTAAGAACTTTTTACAA 1140
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      CACAATTGAGGAATATTGAAAATTTTTCATTATTTCAACATATATATTTGAGGAAAATTT 1200
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      GATGTAACTATACTATTCGAAAGCGCCTCAATCATTTCAATTTTCATGCGGTGAACCTAA 1260
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      AAAAGTTCTCTAGGGTATTTTTATTTGTGAAATTATGAAAGATTTGTTTCAGGGTAATCC 1320
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      ATGATCTTTTTCAGGATTTTTGTATTCTTTTTCGATTTTTTATTAAGTTAACTTCATAAC 1380
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      GGCATTATTCTTAAAAGTAAATTTGGTTGTAACCAGTGTTGACTGAGCATGGATGCCAAA 1440
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      AAGGAGAGATTTAGTGGTTTAGTAACGGAAGAGGGGCAAGGAGAGGTTTACTGTTGACTG 1500
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      AACAGGGATGGTAGAAAACATAATATAGTCTTAAAACTCGCAATGAATGGCAAAATTAAA 1560
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      ATTTCAGTATATTGTTCTGTTTCATACAGGAGAGCCCATGCTGGTTGAGATGTGTAATAA 1620
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      TTGAGTGAATTAAAACATATAAGCATATAACTGAATACAAATTAAATTTTTAGGAAGTAC 1680
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      ATTTTATGACTAGATGGATGCACATAAACCGCTACAATTGGAAATTTTGCAACAGCTATA 1740
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      CTGCAGCTAGAGTGTGTCTAGGGATTCATGGACAAACAACAGAACCAAAAATATTTTTCC 1800
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      TGGTTTTACTTTTCTGTTCTTATCCAATGGTTCTGCATGACTCAAGTTCTTAATTTCCTC 1860
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      CCAAAAATATCCTTTTGAATTTCTACTTTCTAAAAGAAAGAATCAAGGTCCTGAATTTAC 1920
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      ATGCTGTTTGTTCTTTGCAAAATCTAAAAACCATAGGATATCAATATCATGAATATGGGC 1980
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      AATGCATGTTTGGTTGAGTGCCAACCTTTGCTAAACTTGTGGCAACCAAGTTTGACCAAC 2040
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      TAAGGCTAGCGTTTGGTTCATGCCACAAGTGAGTTATGCCACACTTTCTGTTAGCTGGTC 2100
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ----TAGCGAACTGTAGGGTAGCTTCGCCTTAGATGGCGCTCGCTAGGGTTTCTCCCCCC 56
                                                                                  

consensus_9024#0      CACTTGTCATAGAGTGAATTTTTTGCCACAACTTGTCACAATTGTGGCCAACAAATTCTT 2160
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      GCGTTCTCCTCCCCCTTCCTGATCCATTCCTTACTGCGCCCCTTCTCTTCGCCCTCCTCC 116
                                                                                  

consensus_9024#0      GGCCACACAATGTGCGGCATGCCACACGCCAAATATATTGTTATGGAACCATCCAAACAG 2220
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      GTCTTGCGCCCTCGCGTGACTCGCGTCCCCCACCACCGAGGCTTCGCCATCGCCGCCGCC 176
                                                                                  

consensus_9024#0      CCCATATATACCACACATGCAGAAAATATCCTCTAAAGACATGCCATTTTAGC--TGGTG 2278
consensus_9024#2      -------------------------------------------CCTTTTTAANCTTGGTN 17
consensus_9024#1      TTATCTCAGGCCTCTCCGCTTCCCTCTGCGGACGGGGATGGGGCGGTGATGGAGGCGCCG 236
                                                                 *  *  *      *   

consensus_9024#0      TC----ATGGGCATTGGG----CTTAGAGG--CGACCCACT-GGACA-GCCCAATA--CA 2324
consensus_9024#2      TC----CTGGGCCTTGGGG---CTTAANGGGCCGACCCCCTTGGCCA-GCCCAAAAACCA 69
consensus_9024#1      CCGCGGCCGAGCTCCAGGCGCCCATGGAAGCCCACGTGCCTGTACTACACCCAGGGGAAA 296
                       *      * **    **    * *    *  *      **     *  ****      *

consensus_9024#0      TGGTGTGTGAATAA-TACTCGCATGATAGTGTAGCATTTGTTACAGTCAGACAAA-TTA- 2381
consensus_9024#2      TGGTGTGNGNAAAAANACTCGCATGATAGTGTAGCATTTGTTNCAGTCAGACAAAATTA- 128
consensus_9024#1      TGCACCATGGTGGGATTTTCCTTCCCTTTCTCGCGATTCACTGTCGTTTGGTTAATGTAA 356
                      **      *         **      *        ***   *   **  *   **  ** 

consensus_9024#0      -TATCAGCTGTTTCTT-TCTTGTGTGATGCTGTAAGTTTGAATAGACATCTAAATATTTT 2439
consensus_9024#2      -TATCAGCTGTTTCTT-TCTTGTGTGATGCTGTAAGTTTGAATAGACATCTAAATATTTT 186
consensus_9024#1      TTTTCTGTTGCCCCTTGTGACCTGCGGTTCAGGTGGGTTGGATAC-CGTATCAATAGGTT 415
                       * ** * **   *** *    ** * * * *   * *** ***  * * * ****  **

consensus_9024#0      AAAT--AAGTGAGAAAAATGTGACACTGTAACATT---GTATAACTTAGTATATG---CA 2491
consensus_9024#2      AAAT--AAGTGAGAAAAATGTGACACTGTAACATT---GTATAACTTAGTATATG---CA 238
consensus_9024#1      AGATTCAGGTTCAGGTGGGTGGGTACCGTATCAATTAGGTTAGATTCAGTGCATGAGTTA 475
                      * **  * **           *  ** *** ** *   **   * * ***  ***    *

consensus_9024#0      ATATTTCA-TATTGTTTTATTCGTTTG----T----------GATGTTAATCCTTTCTGT 2536
consensus_9024#2      ATATTTCA-TATTGTTTTATTCGTTTG----TAACAATTGTAGATGTTAATCCTTTCTGT 293
consensus_9024#1      ATAATTAAATATGAGGATGTGAGTTTGAACTTGATGCTGGGAGAAGATAATCTCTTGTGG 535
                      *** ** * ***     * *  *****    *          ** * *****  ** ** 

consensus_9024#0      ATTTTCTTGCCTTTT-----------CAGTAATATCAGTTACTATCTCTATCCCCTCGTG 2585
consensus_9024#2      ATTTTCTTGCCTTTT-----------CAGTAATATCAGTTACT----------------- 325
consensus_9024#1      AGTTGTTGTTATTTTGTGGAGAAGTATAATAGTATTGATTAGTAAAACCTTAGCCTTGTA 595
                      * **  *    ****            * ** ***   *** *                 

consensus_9024#0      TGTTGCTTGTAGGTTTGTACACCCTACTGCGATGAGTGAGCAAAGAATAAGAGAATATAT 2645
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      GGAGCGTCAAATTATAACAATGCCTGTATCCT---------------------------- 627
                                                                                  

consensus_9024#0      TGAAGGGAAATATGGGAAATTTGGAGTTGACCGGTATTTGTAGCACTATTTAACTCTGTT 2705
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      TCTCACTGCAGAATAACTTGTTTGATGATTTGATCGTAATTTTCAGTAGCTATACATCAT 2765
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      TAACTATTTTGCTGTTAAAGCGGGAGTCGTTTTTTTTTTCCTTAACATAGGTTCAGTTAG 2825
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      TCTTATCATGAATGTAACCCATGAATTGGCTGGTTATATGGATACATCTAGAGGCGAATC 2885
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      AAACCCTTTAGCTTGTAAAATTTCTAGATTCTTCAGTTGTCTTATTTATCATTTTCTTTA 2945
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      TGAGTTTGTAACTTCAGTTTGTGATGTTCTAAACTGTATCCACTGGTCTAGGTTTAATCT 3005
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      AGTTTGGTTTGCTTTATTTCTTGTATAAAATGTTCTATATATTTTATTTCTTGATTGCAT 3065
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      TCCTTCTTATGGATTGAGTTTTGTATACCACTATCCTTTTGGTAAAACTGTGTTTTGTCA 3125
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      TCAACCCATCTTCATTAGTCACCTGTATTTTATGCA 3161
consensus_9024#2      ------------------------------------
consensus_9024#1      ------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)