cluster # 9034

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Oryza sativa
cluster # 9034 cluster # 9034 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9034#0 length = 2019 sequences # 6
consensusID : consensus_9034#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2019
fasta sequence
                              [CTCGTCCTCACTCCATAACGGCCATGTCGTCCTCGCCTCTAACCGCCACGCCTTCCCCTCTCCTTCCCGCCAAATCCAAGAACCCACCACCCCACCACCACCACCGCAACCCGCTCCTCGCCTACCTCCCGCACTGCACGAGCCTCCGCGCGCTCGCGCAGCTCCACGCCGTCGCCGTCAAGGCCGGCGGCGGCCTCCAGGCGCACCCGGCCTTCGTCACGAGGCTCCTCACGCTCTGCACGGAGCAGGGGGCGGAGGCGCCCGCGCACCTCGCGTACGCGCGCCAGGTGTTCGACAGAATCCCCCACCCGGGCGACGTCGTCTGGTACAACACGCTGCTGCGCGGGTACGCGCGCGGGGGTGGGGGCGGGGGCGGCGCGGAGGAGGCCGCGCGGGTGTTCGTCCGGATGATGGAGGAGGGGGTGGCGCCGACACGTACACGTTCGTGTCGCTGCTCAAGGCGTGCGCGTCCGCGCGGGCCGGCGAGGAAGGGCGGCAGGCGCACGGCGTGGCGGTCAAGGCCGGCGCCGCGGAGCACGAGTACGTCGCGCCCACGCTGATCAACATGTACGCCGAGTGCGGGGACGTGCGCGCCGCGCGCGTGATGTTCGACAGGATGGACGGGGAGTGCGTCGTCTCGTACAATGCCATGATCACCGCGTCCGTCAGGAGCAGCCTGCCCGGCGAGGCGCTGGTGCTGTTCCGGGAGATGCAGGCCAAGGGGCTCAAGCCGACGTCCGTGACGTTGATTAGTGTGCTCTCGGCGTGCGCATTGCTCGGAGCTCTGGAACTTGGGAGGTGGATCCACGACTATATCAGGAAGATGAGGCTTGATTCACTTGTGAAGGTCAACACTGCGCTGATCGACATGTATGCGAAGTGTGGGAGCTTGGAGGATGCCATTGGCGTGTTCCAGGATATGGAATCAAGGGATAAACAAGCTTGGTCTGTGATGATGGTGGCATATGCTAACCATGGCTATGGCAGAGAGGCCATTTCAATGTTCGAAGAGATGAAGAAACAAGGTATGAAACCTGATGATGTTACATTCCTTGGGGTGCTCTATGCCTGCAGCCACTCTGGTATGGTGAGCGAAGGGCTCCAATACTTTGACAGCATGAGGGAATATGGCATTGTTTCAGGGATCAAGCACTATGGTTGTGTGACTGATTTGCTGGCTCGATCAGGTCAGCTAGAAAGGGCTTACAAGTTCATTGATGAACTGCCAATAAAACCAACTGCCATCTTATGGAGGACGCTGCTTTCTGCTTGTGCGGGTCATGGAGATGTCGATATGGGAAAACGTGTCTTTGAGAGGATTCTGGAGCTGGATGATTCTCATGGTGGTGACTATGTAATATTCTCAAATTTGTGTG-CCAATACTGGGAGATGGGAAGAGATGAACATGGTAAGGAAGCTTATGAGTGAAAAGGGGGTGGTGAAGGTGCCAGGGTGTAGCTCAATTGAGATAGATAACATGGTTCATGAGTTCTTCGCAGGAGATGGAAGTCACCCACACTCACAGGAGGCACGCAGAATGGTTGATGAAGTTA-TTGAGCAGCTAAAACTTGTCGGTTATGTCCCTAATACTTCACATGTGTTTCATGTTGAAATGGGTGAGGAGGAGAAAGCAACAAGCCTAAGATACCATAGTGAGAAGCTGGCAATCTCTTTTGGGCTTCTAAATACAGCACCGGGAACTACCCTTCGTATTGTTAAGAATCTTCGTGTGTGTCCAGATTGCCA-TTCGATGGCAAAGCTTGTTTCTATGGTCTTTAACA-GGCGAATCATACTCAGAGACCTAAATCGTTTCCA-CCACTTTGAAGATGGGGTCTGCTCTTGTGGTGACTACTGGTAGAGTTTAGGAACATAACTGCTGTACCAAAATACCTTATCCTTCCAGTAACACAAAGGCTTTATCCATTCAGGTATGATTAACTTGTACACCCATGAGAAACTTACTGATGATTGAAGATTCATTTTCTGAAGATTGAAAAAACCGAGACAATAAAAAAAAAA]

[+] EMBL AK120623             [CTCGTCCTCACTCCATAACGGCCATGTCGTCCTCGCCTCTAACCGCCACGCCTTCCCCTCTCCTTCCCGCCAAATCCAAGAACCCACCACCCCACCACCACCACCGCAACCCGCTCCTCGCCTACCTCCCGCACTGCACGAGCCTCCGCGCGCTCGCGCAGCTCCACGCCGTCGCCGTCAAGGCCGGCGGCGGCCTCCAGGCGCACCCGGCCTTCGTCACGAGGCTCCTCACGCTCTGCACGGAGCAGGGGGCGGAGGCGCCCGCGCACCTCGCGTACGCGCGCCAGGTGTTCGACAGAATCCCCCACCCGGGCGACGTCGTCTGGTACAACACGCTGCTGCGCGGGTACGCGCGCGGGGGTGGGGGCGGGGGCGGCGCGGAGGAGGCCGCGCGGGTGTTCGTCCGGATGATGGAGGAGGGGGTGGCGCCGACACGTACACGTTCGTGTCGCTGCTCAAGGCGTGCGCGTCCGCGCGGGCCGGCGAGGAAGGGCGGCAGGCGCACGGCGTGGCGGTCAAGGCCGGCGCCGCGGAGCACGAGTACGTCGCGCCCACGCTGATCAACATGTACGCCGAGTGCGGGGACGTGCGCGCCGCGCGCGTGATGTTCGACAGGATGGACGGGGAGTGCGTCGTCTCGTACAATGCCATGATCACCGCGTCCGTCAGGAGCAGCCTGCCCGGCGAGGCGCTGGTGCTGTTCCGGGAGATGCAGGCCAAGGGGCTCAAGCCGACGTCCGTGACGTTGATTAGTGTGCTCTCGGCGTGCGCATTGCTCGGAGCTCTGGAACTTGGGAGGTGGATCCACGACTATATCAGGAAGATGAGGCTTGATTCACTTGTGAAGGTCAACACTGCGCTGATCGACATGTATGCGAAGTGTGGGAGCTTGGAGGATGCCATTGGCGTGTTCCAGGATATGGAATCAAGGGATAAACAAGCTTGGTCTGTGATGATGGTGGCATATGCTAACCATGGCTATGGCAGAGAGGCCATTTCAATGTTCGAAGAGATGAAGAAACAAGGTATGAAACCTGATGATGTTACATTCCTTGGGGTGCTCTATGCCTGCAGCCACTCTGGTATGGTGAGCGAAGGGCTCCAATACTTTGACAGCATGAGGGAATATGGCATTGTTTCAGGGATCAAGCACTATGGTTGTGTGACTGATTTGCTGGCTCGATCAGGTCAGCTAGAAAGGGCTTACAAGTTCATTGATGAACTGCCAATAAAACCAACTGCCATCTTATGGAGGACGCTGCTTTCTGCTTGTGCGGGTCATGGAGATGTCGATATGGGAAAACGTGTCTTTGAGAGGATTCTGGAGCTGGATGATTCTCATGGTGGTGACTATGTAATATTCTCAAATTTGTGTG CCAATACTGGGAGATGGGAAGAGATGAACATGGTAAGGAAGCTTATGAGTGAAAAGGGGGTGGTGAAGGTGCCAGGGTGTAGCTCAATTGAGATAGATAACATGGTTCATGAGTTCTTCGCAGGAGATGGAAGTCACCCACACTCACAGGAGGCACGCAGAATGGTTGATGAAGTTA TTGAGCAGCTAAAACTTGTCGGTTATGTCCCTAATACTTCACATGTGTTTCATGTTGAAATGGGTGAGGAGGAGAAAGCAACAAGCCTAAGATACCATAGTGAGAAGCTGGCAATCTCTTTTGGGCTTCTAAATACAGCACCGGGAACTACCCTTCGTATTGTTAAGAATCTTCGTGTGTGTCCAGATTGCCA TTCGATGGCAAAGCTTGTTTCTATGGTCTTTAACA GGCGAATCATACTCAGAGACCTAAATCGTTTCCA CCACTTTGAAGATGGGGTCTGCTCTTGTGGTGACTACTGGTAGAGTTTAGGAACATAACTGCTGTACCAAAATACCTTATCCTTCCAGTAACACAAAGGCTTTATCCATTCAGGTATGATTAACTTGTACACCCATGAGAAACTTACTGATGATTGAAGAT                                           ]
[+] EMBL C27102               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGCAGGCGCACGGCGTGGCGGTCAAGGCCGGCGCCGCGGA NACGAGTACGTCGCGCCCACGCTGATCAACATGTACGCCGAGTGCGGGGACGTGCGCNCCG GGNTNANATGTTCGACAGGATGGACGGGGAGTGCGTCGTCTCGTACAATGCCATGATCACCGCGTCCGTCA GAGCAGCCTGCCCGGCGAGGCGCTGGTGCTGTTCCGGGAGATGCAGGCCAAGGGGCTCAAGCCGACGTCCGTAACGTTNATTAGTGTGCTCTCGGCGTGCGCATTGCTCGGAGCTCTGGAACTTGGGAGGTGGATCCACGACTATATCAGGAAGATGAGGCTTGATTCACTTGTNAAGGTCAACACTNCGCTGATCGACATGTATNCNAAGTGTGGGAGCTTTGAGGATGCCATTGGCGTTTTCCAGGATATGG ATCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB646555             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTGCTCTCGGCGTGCGCATTGCTCGGAGCTCTGGAACTTGGGAGGTGGATCCACGACTATATCAGGAAGATGAGGCTTGATTCACTTGTGAAGGTCAACACTGCGCTGATCGACATGTATGCGAAGTGTGGGAGCTTGGAGGATGCCATTGGCGTGTTCCAGGATATGGAATCAAGGGATAAACAAGCTTGGTCTGTGATGATGGTGGCATATGCTAACCATGGCTATGGCAGAGAGGCCATTTCAATGTTCGAAGAGATGAAGAAACAAGGTATGAAACCTGATGATGTTACATTCCTTGGGGTGCTCTATGCCTGCAGCCACTCTGGTATGGTGAGCGAAGGGCTCCAATACTTTGACAGCATGAGGGAATATGGCATTGTTTCAGGGATCAAGCACTATGGTTGTGTGACTGATTTGCTGGCTCGATCAGGTCAGCTAGAAAGGGCTTACAAGTTCATTGATGAACTGCCAATAAAACCAACTGCCATCTTATGGAGGACGCTGCTTTCTGCTTGTGCGGGTCATGGAGATGTCGATATGGGAAAACGTGTCTTTGAGAGGATTCTGGAGCTGGATGATTCTCATGGTGGTGACTATGTAATATTCTCAAATTTGTGTG CCCATACTGGGAGATGGGAAGAGATGAACATGGTAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB646556             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCGATATGGGAAAACGTGTCTTTGAGAGGATTCTGGAGCTGGATGATTCTCATGGTGGGGACTATGTAATATTCTCAAATTTGTGTG CCAATACTGGGAGATGGGAAGAGATGACCATGGTAAGGAAGCTTATGAGTGAAAAGGGGGTGGTGAAGGTCCCAGGGTGTAGCTCAATTGAGATAGATAACATGGTTCATGAGTTCTTCGCAGGAGATGGAAGTCCCCCCCACTCCCAGGAGGCACGCAGAATGGTTGATGAAGTTA TTGACCAGCTAAAACTTGTCGGTTATGTCCCTAATACTTCACATGTGTTTCATGTTGAAATGGGTGAGGAGGAGAAAGCACCAACCCTAAGATCCCATAGTGAGAAGCTGGCAATCTCTTTTGGGCTTTTAAATACAGCCCCGGGAACTACCCTTCGTATTGTTAAGAATTTTCGTGTGTGTCCAGATTCCCA TTCGATGGCAAAGCTTGTTTTTATGGTCTTTACCA GGGGAATCATACTCAGAGCCCTAAATCGTTTCCC CCCCTTTGAAGATGGGGTCTGCTCTTGTGGTGACTACTGGTAGAGTTTAGGAACATAACTGCTGTACCAAAATCCCTTATCCTTCCAGTAACACAAAG                                                                                                          ]
[+] EMBL AU100793             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTTGAGAGGATTCTGGAGCTGNATGATTCTCATGGTGGTGACTATGTAATATTCTCAAATTTGTNTGCCCAATACTGGGAGATGGGAAGAGATGAACATGGTAAGGAAGCTTATGAGTGAAAAGGGGGTGGTGAAGGTGCCAGGGTGTAGCTCAATTGAGATAGATAACATGGTTCATGAGTTCTTCGCAGGAGATGGAAGTCACCCACACTCACAGGAGGCACGCAGAATGGTTGATGAAGTTA TTGAGCAGCTAAAACTTGTCGGTTATGTCCCTAATACTTCACATGTGTTTCATGTTGAAATGGGTGAGGAGGAGAAAGCAACAAGCCTAAGATACCATAGTGAGAAGCTGGCAATCTCTTTTGGGCTTCTAAATACAGCACCGGGAACTACCCTTCGTATTGTTAAGAATCTTCGTGTGTGTCCAGATTGCCA TTCGATGGCAAAGCTTGTTTCTATGGTCTTTAACA GGCGAATCATACTCAGAGACCTAAATCGTTTCCA CCACTTTGAAGATGGGGTCTGCTCTTGTGGTGACTACTGGTAGAGTTTAGGAACATAACTGCTGTACCAAAATACCTTATCCTTCCAGTAACACAAAGGCTTTATCCATTCAGGTATGATTAACTTGTACACCCATGAGAAACTTACTGATGATTGAAGATTCATTTTCTGAAGATTGAAAAA                     ]
[+] EMBL BI807119             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATGG  AGAGATG ACCTGGTA  GAAGC TATGAGTG AAAGGGGGTGGTGAA GT CCCGGGT TAGCNCAATTGAGATAGATAACATGGTTCATGA TTCTTCCCAGGAGATGGAAGTCACCCACACTCACAGGA GCACGCAGAATGGTTGATGAAGTTATTTGAGCAGCTAAAACTTGTCGGTTATGTCCCTAATACTTCACATGTGTTTCATGTTGAAATGGGTGAGGAGGAGAAA CCACAAGCCTAAGATACCATAGTGAGAAGCTGGCAATCTCTTTTGGGCTTCTAAATACAGCACCGGGAACTACCCTTCGTATTGTTAAGAATCTTCGTGTGTGTCCAGATTGCCACTTCGATGGCAAAGCTTGTTTCTATGGTCTTTAACACGGCGAATCATACTCAGAGACCTAAATCGTTTCCACCCACTTTGAAGATGGGGTCTGCTCTTGTGGTGACTACTGGTAGAGTTTAGGAACATAACTGCTGTACCNAAATACCTTATCCTTCCAGTAACAC AAGGCTTTATCCATTCAGGTATGATTAACTTGTACACCCATGAGAAACTTACTGATGATTGAAGATTCATTTTCTGAAGATTGATGATACCGAGACAATAAAAAAAAAA]




>consensus_9034#0
CTCGTCCTCACTCCATAACGGCCATGTCGTCCTCGCCTCTAACCGCCACGCCTTCCCCTC
TCCTTCCCGCCAAATCCAAGAACCCACCACCCCACCACCACCACCGCAACCCGCTCCTCG
CCTACCTCCCGCACTGCACGAGCCTCCGCGCGCTCGCGCAGCTCCACGCCGTCGCCGTCA
AGGCCGGCGGCGGCCTCCAGGCGCACCCGGCCTTCGTCACGAGGCTCCTCACGCTCTGCA
CGGAGCAGGGGGCGGAGGCGCCCGCGCACCTCGCGTACGCGCGCCAGGTGTTCGACAGAA
TCCCCCACCCGGGCGACGTCGTCTGGTACAACACGCTGCTGCGCGGGTACGCGCGCGGGG
GTGGGGGCGGGGGCGGCGCGGAGGAGGCCGCGCGGGTGTTCGTCCGGATGATGGAGGAGG
GGGTGGCGCCGACACGTACACGTTCGTGTCGCTGCTCAAGGCGTGCGCGTCCGCGCGGGC
CGGCGAGGAAGGGCGGCAGGCGCACGGCGTGGCGGTCAAGGCCGGCGCCGCGGAGCACGA
GTACGTCGCGCCCACGCTGATCAACATGTACGCCGAGTGCGGGGACGTGCGCGCCGCGCG
CGTGATGTTCGACAGGATGGACGGGGAGTGCGTCGTCTCGTACAATGCCATGATCACCGC
GTCCGTCAGGAGCAGCCTGCCCGGCGAGGCGCTGGTGCTGTTCCGGGAGATGCAGGCCAA
GGGGCTCAAGCCGACGTCCGTGACGTTGATTAGTGTGCTCTCGGCGTGCGCATTGCTCGG
AGCTCTGGAACTTGGGAGGTGGATCCACGACTATATCAGGAAGATGAGGCTTGATTCACT
TGTGAAGGTCAACACTGCGCTGATCGACATGTATGCGAAGTGTGGGAGCTTGGAGGATGC
CATTGGCGTGTTCCAGGATATGGAATCAAGGGATAAACAAGCTTGGTCTGTGATGATGGT
GGCATATGCTAACCATGGCTATGGCAGAGAGGCCATTTCAATGTTCGAAGAGATGAAGAA
ACAAGGTATGAAACCTGATGATGTTACATTCCTTGGGGTGCTCTATGCCTGCAGCCACTC
TGGTATGGTGAGCGAAGGGCTCCAATACTTTGACAGCATGAGGGAATATGGCATTGTTTC
AGGGATCAAGCACTATGGTTGTGTGACTGATTTGCTGGCTCGATCAGGTCAGCTAGAAAG
GGCTTACAAGTTCATTGATGAACTGCCAATAAAACCAACTGCCATCTTATGGAGGACGCT
GCTTTCTGCTTGTGCGGGTCATGGAGATGTCGATATGGGAAAACGTGTCTTTGAGAGGAT
TCTGGAGCTGGATGATTCTCATGGTGGTGACTATGTAATATTCTCAAATTTGTGTGCCAA
TACTGGGAGATGGGAAGAGATGAACATGGTAAGGAAGCTTATGAGTGAAAAGGGGGTGGT
GAAGGTGCCAGGGTGTAGCTCAATTGAGATAGATAACATGGTTCATGAGTTCTTCGCAGG
AGATGGAAGTCACCCACACTCACAGGAGGCACGCAGAATGGTTGATGAAGTTATTGAGCA
GCTAAAACTTGTCGGTTATGTCCCTAATACTTCACATGTGTTTCATGTTGAAATGGGTGA
GGAGGAGAAAGCAACAAGCCTAAGATACCATAGTGAGAAGCTGGCAATCTCTTTTGGGCT
TCTAAATACAGCACCGGGAACTACCCTTCGTATTGTTAAGAATCTTCGTGTGTGTCCAGA
TTGCCATTCGATGGCAAAGCTTGTTTCTATGGTCTTTAACAGGCGAATCATACTCAGAGA
CCTAAATCGTTTCCACCACTTTGAAGATGGGGTCTGCTCTTGTGGTGACTACTGGTAGAG
TTTAGGAACATAACTGCTGTACCAAAATACCTTATCCTTCCAGTAACACAAAGGCTTTAT
CCATTCAGGTATGATTAACTTGTACACCCATGAGAAACTTACTGATGATTGAAGATTCAT
TTTCTGAAGATTGAAAAAACCGAGACAATAAAAAAAAAA
clustalw multiple alignements is not computed in this case