cluster # 9117

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Oryza sativa
cluster # 9117 cluster # 9117 Sequences # 6 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9117#0 length = 1813 sequences # 4

consensus_9117#1 length = 587 sequences # 1
consensus_9117#2 length = 201 sequences # 1

consensusID : consensus_9117#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1813
fasta sequence

                              [TCGGGGAGCTGCTGCTCCGCGCGGCGGCGATGGTGCCAGCGGAGCACTACGCGCTCGCGGCGCTCGCCGTGGTGTCGGTCCTCGCGTACGGGTTCCTGGAGCTGCACTTCCTCGGGGACCTCCTCCGCGGGTTCCGCTGCGGCCGCGTCGAGCTCACCTTCCACCCGGCCTCCGAGATCTACCACCGCGTAGCCTCCAAGTGCCGCTCCCTCCACGGCAGGTATCTGGCGACGCCTTGGCTCGCCAGCCCACATTTGCAGACACTGTTCCTGGGTATCTCCGGGAGGCCACCTTCGTTCACATACAAAAGGCAATTGTACACAGTACATGATGGTGGGACCATTGCTTTGGACTGGCTGCTTGCCACTGATTCAAAGGGTTCAGATGGGATCCTTTCTGAGGATGCTTCAGCACCACTTGTAGTTATTGTACCTGGATTAACTAGTGATTCTGCTGCTGCTTATGTAAAACACATGGCTTATTCCATGGCAACGAAGGGGTGTAACACTGTTGTAAGCAATCACAGGGGTCTTGGTGGTGTGTCCATTACTTCAGATTGCCTCTACAATGCTGGATGGACAGAAGATCTCCGAGAAGTCATTAATTATCTCCATCACAAATATCCAAAGGCTCCAATGCTCTGTGTTGGTACAAGCATAGGGGCCAACATTGTGGTCAAATATCTTGGAGAAGAAGGTGAGAATACTCCTGTGGCTGGTGCCGCATCTATTTGTTCTCCCTGGGATCTGGTGGTGGGCGACCGATTTATTTCCCGCAAGCTTGTGCAGCGGTTTTACGACAAAGCCCTTGCCTTTGGTCTTAAGGGATATGCAAAGCTGCATGAACCTGTGTTGGTTCGAATTGCAAATTGGGAAGGTATTAAAAAGTCACGCTCTATCCGGGAATTTGACCACCATGCCACCTGCATGGTTGCAAAATATGAGACAGTAGATACCTACTACCGCCGTTGCAGCAGTGCCAGTTATGTTGGTAATGTGTCAGTTCCCTTGCTATGTGTCAATGCTTTGGATGACCCCCTCTGCACAAGGGAGGCCATCCCTTGGGATGAGTGCAGGGCCAACAAGAACATTGTTTTGGCTACTACTCCGAATGGCGGTCATCTTGCATTCTTTCAAGGACTAACTGCTGGAAGACTATGGTGGGTCGGAGCTGTTTCTGAGTTCCTCTTCGCTCTGCTTGACAGTAAATACATGCATCAGCAAAAGGCACAAGACCATATTTTGCGTTCTTCCTTGGAGTCGTCCATCGATAAGAGCCCATATGTCAACGTCATGGAAGATGGAATGATAGCTCCGGTGACAGATGATGGCCCTTGTGATGATATCACCCCTTCTCACCAGGTTAATGACATAAAACAAGATAATGGGGATTTTACGCAACAGAATGAACACACCAGGGAAGCAGATGATAAAAATATCACAGAAGTAAATGCAATGCCTTCCCAAAGCCCTGAACAGTCTGCAGGACAGCAAGTAGAGGAACACTACGTTGGTAAGTTTCATGAGGCCATTGCTCCAGTTAAGAGATCCATAAACCAACTCACTCGGTACCAGGGTAAGTCAGTCTGGTTGCTTGCTTATATTGCTTTTGTAACATCATGGCCACTCCTTGGTTCCTTAGCTTTTATCGCATTTAGGAAAAAGTTCAGGAATAATTTGCTAGCTAAGTGGCTGAGAAGATAAATAAGTTGTGTTCCAACAGTTTTTTTTTTTCATTTGCATCATGTAAAACTCAGAATTGTTTAAAGGCTTGAAAAGCCATTCGNTCTCAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK064743             [TCGGGGAGCTGCTGCTCCGCGCGGCGGCGATGGTGCCAGCGGAGCACTACGCGCTCGCGGCGCTCGCCGTGGTGTCGGTCCTCGCGTACGGGTTCCTGGAGCTGCACTTCCTCGGGGACCTCCTCCGCGGGTTCCGCTGCGGCCGCGTCGAGCTCACCTTCCACCCGGCCTCCGAGATCTACCACCGCGTAGCCTCCAAGTGCCGCTCCCTCCACGGCAGGTATCTGGCGACGCCTTGGCTCGCCAGCCCACATTTGCAGACACTGTTCCTGGGTATCTCCGGGAGGCCACCTTCGTTCACATACAAAAGGCAATTGTACACAGTACATGATGGTGGGACCATTGCTTTGGACTGGCTGCTTGCCACTGATTCAAAGGGTTCAGATGGGATCCTTTCTGAGGATGCTTCAGCACCACTTGTAGTTATTGTACCTGGATTAACTAGTGATTCTGCTGCTGCTTATGTAAAACACATGGCTTATTCCATGGCAACGAAGGGGTGTAACACTGTTGTAAGCAATCACAGGGGTCTTGGTGGTGTGTCCATTACTTCAGATTGCCTCTACAATGCTGGATGGACAGAAGATCTCCGAGAAGTCATTAATTATCTCCATCACAAATATCCAAAGGCTCCAATGCTCTGTGTTGGTACAAGCATAGGGGCCAACATTGTGGTCAAATATCTTGGAGAAGAAGGTGAGAATACTCCTGTGGCTGGTGCCGCATCTATTTGTTCTCCCTGGGATCTGGTGGTGGGCGACCGATTTATTTCCCGCAAGCTTGTGCAGCGGTTTTACGACAAAGCCCTTGCCTTTGGTCTTAAGGGATATGCAAAGCTGCATGAACCTGTGTTGGTTCGAATTGCAAATTGGGAAGGTATTAAAAAGTCACGCTCTATCCGGGAATTTGACCACCATGCCACCTGCATGGTTGCAAAATATGAGACAGTAGATACCTACTACCGCCGTTGCAGCAGTGCCAGTTATGTTGGTAATGTGTCAGTTCCCTTGCTATGTGTCAATGCTTTGGATGACCCCCTCTGCACAAGGGAGGCCATCCCTTGGGATGAGTGCAGGGCCAACAAGAACATTGTTTTGGCTACTACTCCGAATGGCGGTCATCTTGCATTCTTTCAAGGACTAACTGCTGGAAGACTATGGTGGGTCGGAGCTGTTTCTGAGTTCCTCTTCGCTCTGCTTGACAGTAAATACATGCATCAGCAAAAGGCACAAGACCATATTTTGCGTTCTTCCTTGGAGTCGTCCATCGATAAGAGCCCATATGTCAACGTCATGGAAGATGGAATGATAGCTCCGGTGACAGATGATGGCCCTTGTGATGATATCACCCCTTCTCACCAGGTTAATGACATAAAACAAGATAATGGGGATTTTACGCAACAGAATGAACACACCAGGGAAGCAGATGATAAAAATATCACAGAAGTAAATGCAATGCCTTCCCAAAGCCCTGAACAGTCTGCAGGACAGCAAGTAGAGGAACACTACGTTGGTAAGTTTCATGAGGCCATTGCTCCAGTTAAGAGATCCATAAACCAACTCACTCGGTACCAGGGTAAGTCAGTCTGGTTGCTTGCTTATATTGCTTTTGTAACATCATGGCCACTCCTTGGTTCCTTAGCTTTTATCGCATTTAGGAAAAAGTTCAGGAATAATTTGCTAGCTAAGTGGCTGAGAAGATAAATAAGTTGTGTTCCAACAGTTTTTTTTTTTCATTTGCATCATGTAAAACTCAGAATTGTTTAAAGGCTTGAAAAGCC                                 ]
[-] EMBL CB238476             [                                                                                                                                                                CCACCCGGCCTCCGAGATCTACCACCGCGTAGCCTCCAAGTGCCGCCCCCTCCACGGCAGGTATCTGGCGACGCCTTGGCTCGCCAGCCCACATTTGCAGACACTGTTCCTGGGTATCTCCGGGAGGCCACCTTCGTTCACATACAAAAGGCAATTGTACACAGTACATGATGGTGGGACCATTGCTTTGGACTGGCTGCTTGCCACTGATTCAAAGGGTTCAGATGGGATCTTTTCTGAGGATGTTTCAGCACCACTTGTAGTTATTGTACCTGGATTAACTAGTGATTCTGCTGCTGCTTATGTAAAACACATGGCTTATTCCATGGCAACGGAGGGGTGTAACACTGTTGTAAGC ATCACAGGGGTCTTGGTGGTGTGTCCATTACTTCAGATTGCCCCTAC ATGCTGGATGGACAGAAGATCTCCGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU163160             [                                                                                                                                                                       cgagCCGAGATCTACCACCGCGTAG CTCCAAGTGCCGNTCCCTNCACGGCAGGTATCTGGCGACGNCTTGGNTCGCCAGNCCACANTTGCAGACACTGTTCCTGGGTATCTCCGGGAGGCCACCTTCGTTCACATACAAAAGGCAATTGTACACAGTACATGNTGGTGGGACCATTGCTTTGGACTGGCTGCTTGCCACTGATTCAAAGGGTTCAGATGGGATCCTTTCTGAGGATGCTTCAGCACCACTTGTAGTTATTGTACCTGGATTAACTAGTGATTCTNCTGCTGCTTATGTAAANCACATGGGTTATTCCATGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU086012             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTAAGTTTCATGAGGCCATTGCTCCAGTTAAGAGATCCATAAACCAACTCACTCGGTACCAGGGTAAGTCAGTCTGGTTGCTTGCTTATATTGCTTTTGTAACATCATGGCCACTCCTTGGTTCCTTAGCTTTTATCGCATTTAGGAAAAAGTTCAGGAATNATTTGCTAGCTAAGTGGCTGAGAAGATAAATAAGTTGTGTTCCAACAGTTTTTTTTTTTCATTTGCATCATGTAAAACTNAGAATTGTTTAAAGGCTTGAAAANCCATTCGNTCTCAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_9117#0
TCGGGGAGCTGCTGCTCCGCGCGGCGGCGATGGTGCCAGCGGAGCACTACGCGCTCGCGG
CGCTCGCCGTGGTGTCGGTCCTCGCGTACGGGTTCCTGGAGCTGCACTTCCTCGGGGACC
TCCTCCGCGGGTTCCGCTGCGGCCGCGTCGAGCTCACCTTCCACCCGGCCTCCGAGATCT
ACCACCGCGTAGCCTCCAAGTGCCGCTCCCTCCACGGCAGGTATCTGGCGACGCCTTGGC
TCGCCAGCCCACATTTGCAGACACTGTTCCTGGGTATCTCCGGGAGGCCACCTTCGTTCA
CATACAAAAGGCAATTGTACACAGTACATGATGGTGGGACCATTGCTTTGGACTGGCTGC
TTGCCACTGATTCAAAGGGTTCAGATGGGATCCTTTCTGAGGATGCTTCAGCACCACTTG
TAGTTATTGTACCTGGATTAACTAGTGATTCTGCTGCTGCTTATGTAAAACACATGGCTT
ATTCCATGGCAACGAAGGGGTGTAACACTGTTGTAAGCAATCACAGGGGTCTTGGTGGTG
TGTCCATTACTTCAGATTGCCTCTACAATGCTGGATGGACAGAAGATCTCCGAGAAGTCA
TTAATTATCTCCATCACAAATATCCAAAGGCTCCAATGCTCTGTGTTGGTACAAGCATAG
GGGCCAACATTGTGGTCAAATATCTTGGAGAAGAAGGTGAGAATACTCCTGTGGCTGGTG
CCGCATCTATTTGTTCTCCCTGGGATCTGGTGGTGGGCGACCGATTTATTTCCCGCAAGC
TTGTGCAGCGGTTTTACGACAAAGCCCTTGCCTTTGGTCTTAAGGGATATGCAAAGCTGC
ATGAACCTGTGTTGGTTCGAATTGCAAATTGGGAAGGTATTAAAAAGTCACGCTCTATCC
GGGAATTTGACCACCATGCCACCTGCATGGTTGCAAAATATGAGACAGTAGATACCTACT
ACCGCCGTTGCAGCAGTGCCAGTTATGTTGGTAATGTGTCAGTTCCCTTGCTATGTGTCA
ATGCTTTGGATGACCCCCTCTGCACAAGGGAGGCCATCCCTTGGGATGAGTGCAGGGCCA
ACAAGAACATTGTTTTGGCTACTACTCCGAATGGCGGTCATCTTGCATTCTTTCAAGGAC
TAACTGCTGGAAGACTATGGTGGGTCGGAGCTGTTTCTGAGTTCCTCTTCGCTCTGCTTG
ACAGTAAATACATGCATCAGCAAAAGGCACAAGACCATATTTTGCGTTCTTCCTTGGAGT
CGTCCATCGATAAGAGCCCATATGTCAACGTCATGGAAGATGGAATGATAGCTCCGGTGA
CAGATGATGGCCCTTGTGATGATATCACCCCTTCTCACCAGGTTAATGACATAAAACAAG
ATAATGGGGATTTTACGCAACAGAATGAACACACCAGGGAAGCAGATGATAAAAATATCA
CAGAAGTAAATGCAATGCCTTCCCAAAGCCCTGAACAGTCTGCAGGACAGCAAGTAGAGG
AACACTACGTTGGTAAGTTTCATGAGGCCATTGCTCCAGTTAAGAGATCCATAAACCAAC
TCACTCGGTACCAGGGTAAGTCAGTCTGGTTGCTTGCTTATATTGCTTTTGTAACATCAT
GGCCACTCCTTGGTTCCTTAGCTTTTATCGCATTTAGGAAAAAGTTCAGGAATAATTTGC
TAGCTAAGTGGCTGAGAAGATAAATAAGTTGTGTTCCAACAGTTTTTTTTTTTCATTTGC
ATCATGTAAAACTCAGAATTGTTTAAAGGCTTGAAAAGCCATTCGNTCTCAAAAAAAAAA
AAAAAAAAAAAAA

consensusID : consensus_9117#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 587
fasta sequence

                              [ACCTTCCACCCGGCCTCCGAGATCTACCACCGCGTANCTCCAAGTGCCGCTCCCTCCACGGCAGGTATCTGGCGACGCCTTGGCTCGCCAGCCCACATTTGCAGACACTGTTCCTGGGTATCTCCGGGAGGCCACCTTCGTTCACATACAAAAGGTCTGCAGCACTCATGAATGAATAGGCAGCCAGAAACCCCACACCAGTGTGACTGTCACTACGATGATCTAGTATGACACTTCCTCAGAATGCAAATTGAGCTCCAACATCCAGAGGTTACAGGTATAGCCAAGAAGACTGAAGCTCTGAATGAGGATGATGTGCCTGTCCACAATCAAAACATTAAGGATTTGTCACCTTCGCACCAACAAAACAGTGAAACAAACATGCACCTGTTGCTTCTCTGCCCATACGCCCATGAAATCTGGAAAACAGTCCTATATGGGCAAAATGCACCATCATGACGACAGCCAAACGTCGATACTTTGACATTCTAGAGGATTTGTGGCATCAAGATTGCTCATGCTTGCAAAAGGAGTGGAGGTGCAGGCAATTGTACACAGTACATGATGGTGGGACCATTGCTTTGGAC]

[+] EMBL AU086013             [ACCTTCCACCCGGCCTCCGAGATCTACCACCGCGTANCTCCAAGTGCCGCTCCCTCCACGGCAGGTATCTGGCGACGCCTTGGCTCGCCAGCCCACATTTGCAGACACTGTTCCTGGGTATCTCCGGGAGGCCACCTTCGTTCACATACAAAAGGTCTGCAGCACTCATGAATGAATAGGCAGCCAGAAACCCCACACCAGTGTGACTGTCACTACGATGATCTAGTATGACACTTCCTCAGAATGCAAATTGAGCTCCAACATCCAGAGGTTACAGGTATAGCCAAGAAGACTGAAGCTCTGAATGAGGATGATGTGCCTGTCCACAATCAAAACATTAAGGATTTGTCACCTTCGCACCAACAAAACAGTGAAACAAACATGCACCTGTTGCTTCTCTGCCCATACGCCCATGAAATCTGGAAAACAGTCCTATATGGGCAAAATGCACCATCATGACGACAGCCAAACGTCGATACTTTGACATTCTAGAGGATTTGTGGCATCAAGATTGCTCATGCTTGCAAAAGGAGTGGAGGTGCAGGCAATTGTACACAGTACATGATGGTGGGACCATTGCTTTGGAC]




>consensus_9117#1
ACCTTCCACCCGGCCTCCGAGATCTACCACCGCGTANCTCCAAGTGCCGCTCCCTCCACG
GCAGGTATCTGGCGACGCCTTGGCTCGCCAGCCCACATTTGCAGACACTGTTCCTGGGTA
TCTCCGGGAGGCCACCTTCGTTCACATACAAAAGGTCTGCAGCACTCATGAATGAATAGG
CAGCCAGAAACCCCACACCAGTGTGACTGTCACTACGATGATCTAGTATGACACTTCCTC
AGAATGCAAATTGAGCTCCAACATCCAGAGGTTACAGGTATAGCCAAGAAGACTGAAGCT
CTGAATGAGGATGATGTGCCTGTCCACAATCAAAACATTAAGGATTTGTCACCTTCGCAC
CAACAAAACAGTGAAACAAACATGCACCTGTTGCTTCTCTGCCCATACGCCCATGAAATC
TGGAAAACAGTCCTATATGGGCAAAATGCACCATCATGACGACAGCCAAACGTCGATACT
TTGACATTCTAGAGGATTTGTGGCATCAAGATTGCTCATGCTTGCAAAAGGAGTGGAGGT
GCAGGCAATTGTACACAGTACATGATGGTGGGACCATTGCTTTGGAC

consensusID : consensus_9117#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 201
fasta sequence

                              [AANANCATGGCCACTCCTTGGNTCCTTANCTTTTANCGCATTTAGGAAAAAGTTCAGGAANAANTTGCTANCTAANTGGCTGANAAGATAAANAANTTNTGTTCCAANAGTTTTTTTTTTTCATTTGCATCATGTAAAACTCAGAANTGTTTAAAGGCTTGAAAANCCATTCGATCTCAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU095844             [AANANCATGGCCACTCCTTGGNTCCTTANCTTTTANCGCATTTAGGAAAAAGTTCAGGAANAANTTGCTANCTAANTGGCTGANAAGATAAANAANTTNTGTTCCAANAGTTTTTTTTTTTCATTTGCATCATGTAAAACTCAGAANTGTTTAAAGGCTTGAAAANCCATTCGATCTCAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_9117#2
AANANCATGGCCACTCCTTGGNTCCTTANCTTTTANCGCATTTAGGAAAAAGTTCAGGAA
NAANTTGCTANCTAANTGGCTGANAAGATAAANAANTTNTGTTCCAANAGTTTTTTTTTT
TCATTTGCATCATGTAAAACTCAGAANTGTTTAAAGGCTTGAAAANCCATTCGATCTCAA
AAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9117#0      TCGGGGAGCTGCTGCTCCGCGCGGCGGCGATGGTGCCAGCGGAGCACTACGCGCTCGCGG 60
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      ------------------------------------------------------------
                                                                                  

consensus_9117#0      CGCTCGCCGTGGTGTCGGTCCTCGCGTACGGGTTCCTGGAGCTGCACTTCCTCGGGGACC 120
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      ------------------------------------------------------------
                                                                                  

consensus_9117#0      TCCTCCGCGGGTTCCGCTGCGGCCGCGTCGAGCTCACCTTCCACCCGGCCTCCGAGATCT 180
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      ------------------------------------------------------------
                                                                                  

consensus_9117#0      ACCACCGCGTAGCCTCCAAGTGCCGCTCCCTCCACGGCAGGTATCTGGCGACGCCTTGGC 240
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      ------------------------------------------------------------
                                                                                  

consensus_9117#0      TCGCCAGCCCACATTTGCAGACACTGTTCCTGGGTATCTCCGGGAGGCCACCTTCGTTCA 300
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      ------------------------------------------------------------
                                                                                  

consensus_9117#0      CATACAAAAGGCAATTGTACACAGTACATGATGGTGGGACCATTGCTTTGGACTGGCTGC 360
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      ------------------------------------------------------------
                                                                                  

consensus_9117#0      TTGCCACTGATTCAAAGGGTTCAGATGGGATCCTTTCTGAGGATGCTTCAGCACCACTTG 420
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      ------------------------------------------------------------
                                                                                  

consensus_9117#0      TAGTTATTGTACCTGGATTAACTAGTGATTCTGCTGCTGCTTATGTAAAACACATGGCTT 480
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      ------------------------------------------------------------
                                                                                  

consensus_9117#0      ATTCCATGGCAACGAAGGGGTGTAACACTGTTGTAAGCAATCACAGGGGTCTTGGTGGTG 540
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      ------------------------------------------------------------
                                                                                  

consensus_9117#0      TGTCCATTACTTCAGATTGCCTCTACAATGCTGGATGGACAGAAGATCTCCGAGAAGTCA 600
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      ------------------------------------------------------------
                                                                                  

consensus_9117#0      TTAATTATCTCCATCACAAATATCCAAAGGCTCCAATGCTCTGTGTTGGTACAAGCATAG 660
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      ------------------------------------------------------------
                                                                                  

consensus_9117#0      GGGCCAACATTGTGGTCAAATATCTTGGAGAAGAAGGTGAGAATACTCCTGTGGCTGGTG 720
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      ------------------------------------------------------------
                                                                                  

consensus_9117#0      CCGCATCTATTTGTTCTCCCTGGGATCTGGTGGTGGGCGACCGATTTATTTCCCGCAAGC 780
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      ------------------------------------------------------------
                                                                                  

consensus_9117#0      TTGTGCAGCGGTTTTACGACAAAGCCCTTGCCTTTGGTCTTAAGGGATATGCAAAGCTGC 840
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      ------------------------------------------------------------
                                                                                  

consensus_9117#0      ATGAACCTGTGTTGGTTCGAATTGCAAATTGGGAAGGTATTAAAAAGTCACGCTCTATCC 900
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      ------------------------------------------------------------
                                                                                  

consensus_9117#0      GGGAATTTGACCACCATGCCACCTGCATGGTTGCAAAATATGAGACAGTAGATACCTACT 960
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      ------------------------------------------------------------
                                                                                  

consensus_9117#0      ACCGCCGTTGCAGCAGTGCCAGTTATGTTGGTAATGTGTCAGTTCCCTTGCTATGTGTCA 1020
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      ------------------------------------------------------------
                                                                                  

consensus_9117#0      ATGCTTTGGATGACCCCCTCTGCACAAGGGAGGCCATCCCTTGGGATGAGTGCAGGGCCA 1080
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      ------------------------------------------------------------
                                                                                  

consensus_9117#0      ACAAGAACATTGTTTTGGCTACTACTCCGAATGGCGGTCATCTTGCATTCTTTCAAGGAC 1140
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      ------------------------------------------------------------
                                                                                  

consensus_9117#0      TAACTGCTGGAAGACTATGGTGGGTCGGAGCTGTTTCTGAGTTCCTCTTCGCTCTGCTTG 1200
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      ------------------------------------------------------------
                                                                                  

consensus_9117#0      ACAGTAAATACATGCATCAGCAAAAGGCACAAGACCATATTTTGCGTTCTTCCTTGGAGT 1260
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      ------------ACCTTCCACCCGGCCTCCGAGATCTACCACCGCGTANCTCCAAGTGCC 48
                                                                                  

consensus_9117#0      CGTCCATCGATAAGAGCCCATATGTCAACGTCATGGAAGATGGAATGATAGCTCCGGTGA 1320
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      GCTCCCTCCACGGCAGGT-ATCTGGCGACGCCTTGGCTCGCCAGCCCACATTTGCAGACA 107
                                                                                  

consensus_9117#0      CAGATGATGGCCCTTGTGATGATATCACCCCTTCTCACCAGGTTAATGACATAAAACAAG 1380
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      CTGTTCCTGGGTATCTCCGGGAGGCCACCTTCGTTCAC-ATACAAAAGGTCTGCAGCA-- 164
                                                                                  

consensus_9117#0      ATAATGGGGATTTTACGCAACAGAATGAACACACCAGGGAAGCAGATGATAAAAATATCA 1440
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      CTCATGAATGAATAGGCAGCCAGAAACCCCACACCAGTGTGACTGTCACTACGATGATCT 224
                                                                                  

consensus_9117#0      CAGAAGTAAATGCAATGCCTTCCCAAAGCCCTGAACAGTCTGCAGGACAGCAAGTAGAGG 1500
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      --------AGTATGACACTTCCTCAGAATGCAAATTGAGCT-----CCAACATCCAGAGG 271
                                                                                  

consensus_9117#0      AACACTACGTTGGTAAGTTTCATGAGGCCATTGCTCCAGTTAAGAGATCCATAAACCAAC 1560
consensus_9117#2      ------------------------------------------------------------
consensus_9117#1      T------TACAGGTATAGCCAAGAAGACTGAAGCTCTGAATGAGGATGATGTGCCTGTCC 325
                                                                                  

consensus_9117#0      TCACTCGGTACCAGGGTAAGTCAGTCTGGTTGCTTGCTTATATTGCTTTTGTAACATCAT 1620
consensus_9117#2      ----------------------------------------------------AANANCAT 8
consensus_9117#1      ACAATCAAAACATTAAGGATTTGTCACCTTCGCACCAACAAAACAGTGAAACAAACATGC 385
                                                                          **      

consensus_9117#0      GGCCACTCCTTGGTTCCTTA-GCTTTTATCGCATTTAGGAAAAAGTTC---AGGAATAAT 1676
consensus_9117#2      GGCCACTCCTTGGNTCCTTA-NCTTTTANCGCATTTAGGAAAAAGTTC---AGGAANAAN 64
consensus_9117#1      ACCTGTTGCTTCTCTGCCCATACGCCCATGAAATCTGGAAAACAGTCCTATATGGGCAAA 445
                        *   * ***   * *  *  *    *    ** * * *** *** *   * *   ** 

consensus_9117#0      TTGCTAGCTAAGTGGCTGAGAAGATAAATAAGTTGTGTTCCAACAGTTTTTTTTTTTCAT 1736
consensus_9117#2      TTGCTANCTAANTGGCTGANAAGATAAANAANTTNTGTTCCAANAGTTTTTTTTTTTCAT 124
consensus_9117#1      ATGC-ACCATCATGAC---GACAGCCAAACGTCGATACTTTGACATTCTAGAGGATTTGT 501
                       *** * *    ** *    *     **       *  *   * * * *      **  *

consensus_9117#0      TTGCATCATGTAAAACTCAGAATTGTTTAAAGGCTTGAAAAGCCATTCGNTCTCAAAAAA 1796
consensus_9117#2      TTGCATCATGTAAAACTCAGAANTGTTTAAAGGCTTGAAAANCCATTCGATCTCAAAAAA 184
consensus_9117#1      G-GCATCAAG-ATTGCTCATGCTTGCA-AAAGGAGTGGAGGTGCAGGCAATTGTACACAG 558
                        ****** * *   ****    **   *****  ** *    **  *  *   * * * 

consensus_9117#0      AAAAAAAAAAAAAAAAA------------ 1813
consensus_9117#2      AAAAAAAAAAAAAAAAA------------ 201
consensus_9117#1      TACATGATGGTGGGACCATTGCTTTGGAC 587
                       * *  *       *