cluster # 9170

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Oryza sativa
cluster # 9170 cluster # 9170 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9170#0 length = 1562 sequences # 6
consensusID : consensus_9170#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1562
fasta sequence
                              [AATGGCAAAATGATGCAGCAGATTGCTTGGGAGGCTTCTCCAGCTTTAGAGTCTTCTGAAAGATATGACCTATTGGATAATCATACCATGGATGCTTTAGCTGGAGGGATTGGCAATGCTACCTTTGGCAAGAGTAAGAAAGGGAGATGTACTGATCTGTCATCATCATTAGGTAGGGAAAGCACTTCAGAATATGTTTCACTTGAGGATCTTGCACCATTAGCCATGGAAAAGATTGAAGCCCTTTCCATTGAGGGTCTGAGGATACAATCTGGCATGTCAGAAGAGGATGCACCCTCCAATATCAGTGCCCAGCCTATTGGGGAATTTTCCTCTCTGCAAGGAAAATGTGCAGGGAATACCCTCTCCCTTGGTTTAGAAGGAACCGCAGGGTTACAACTCCTGGATGTCAAACAAAGTGGTGGTGATGTCGATGGACTAAT-GGGGTTGTCAATCACTCTTGATGAGTGGATGAGGCTTGATTCTGGCATAGTAGATGAAGATGAGCAGTTCACTGACCGGACGTCAAAGATACTTGCTGCTCACCATGCCAAATCAATGGAATTAGTTGCTGAAAACCAGAATGTGGACAAAAAGAACAGGAGGTCTGGTAGAAGAT-GGGGTTTGCTAGGGAACAACTTCACTGTTGCTCTCATGGTTCAACTGCGTGACCCACTACGTAACTATGAGCCAGTTGGCACGCCGATGCTTGCTTTAATTCAAGTGGAAAGGGTCTTCGTTCCCCCAAAGCCTAAGATATACAGTACTGTCACAGATAAAGGTAACAGTGAGCATGATGATGAGGAGCCCAAGACTGAAGAGGTACTAGAAAAAGCTTTGGTCAAGGAAGAAAAGATTGAGGAAGAAGAAGATTCTGTTCCACAATTTAAAGTCGCAGAAGTGCATGTAGCTGGTTTCAAGAGCGAGCCTGAGAAGACAAAATCATGGGGTAATCAAACACAGCAACAATCGGGATCAAGATGGCTGCTTGCAGCTGGCATGGGTAAGGGCAATAAGCATCCCCTGATGAAATCCAAAGCTATTGCGAAG-CCAACTAAAGAGGCAGCTGGTCAGTCA-GAAGACA-CCCTTTGGAGCATTTCTTCACGCGTACATGGAGCTGGAACCAGATGGGGCGAATTAGCTGGACCTAAAAGG-AACCCAAATATCCTCCTTCAAAAAGAAAAGCGATTTAGGTGATGGCTTGGCAATTATCAGTATTTAGCTCTTGTGATTTGCTGTCTTGGATGAATCTGTTCAGGGAAGAGTCTATTTATCTGGAACCTTGTCCTCACTGGAATACTTCTAGTGGACTGTTAATGTAAATGTAGTTCCTTTTTCTTGATACACCTTGAACCATCCAGGTACATGCACATGCTTCCGATCGGTTGTGCTCCTTTTCTCCTTGTACTTGGCTGTACTGAGAAACTGGTATTTCTCCTTTTCTTGTTACAATTGAAATAGTGGCTTTTTGCCTGTGAAGGCGCAATAGCAA---TACAGCCTTCTCATGTATGTAGTGGTTCTAGCATTCATTTGGCCAGTCTTTTAACGGATTTTATACCCAT]

[+] EMBL AK060399             [AATGGCAAAATGATGCAGCAGATTGCTTGGGAGGCTTCTCCAGCTTTAGAGTCTTCTGAAAGATATGACCTATTGGATAATCATACCATGGATGCTTTAGCTGGAGGGATTGGCAATGCTACCTTTGGCAAGAGTAAGAAAGGGAGATGTACTGATCTGTCATCATCATTAGGTAGGGAAAGCACTTCAGAATATGTTTCACTTGAGGATCTTGCACCATTAGCCATGGAAAAGATTGAAGCCCTTTCCATTGAGGGTCTGAGGATACAATCTGGCATGTCAGAAGAGGATGCACCCTCCAATATCAGTGCCCAGCCTATTGGGGAATTTTCCTCTCTGCAAGGAAAATGTGCAGGGAATACCCTCTCCCTTGGTTTAGAAGGAACCGCAGGGTTACAACTCCTGGATGTCAAACAAAGTGGTGGTGATGTCGATGGACTAAT GGGGTTGTCAATCACTCTTGATGAGTGGATGAGGCTTGATTCTGGCATAGTAGATGAAGATGAGCAGTTCACTGACCGGACGTCAAAGATACTTGCTGCTCACCATGCCAAATCAATGGAATTAGTTGCTGAAAACCAGAATGTGGACAAAAAGAACAGGAGGTCTGGTAGAAGAT GGGGTTTGCTAGGGAACAACTTCACTGTTGCTCTCATGGTTCAACTGCGTGACCCACTACGTAACTATGAGCCAGTTGGCACGCCGATGCTTGCTTTAATTCAAGTGGAAAGGGTCTTCGTTCCCCCAAAGCCTAAGATATACAGTACTGTCACAGATAAAGGTAACAGTGAGCATGATGATGAGGAGCCCAAGACTGAAGAGGTACTAGAAAAAGCTTTGGTCAAGGAAGAAAAGATTGAGGAAGAAGAAGATTCTGTTCCACAATTTAAAGTCGCAGAAGTGCATGTAGCTGGTTTCAAGAGCGAGCCTGAGAAGACAAAATCATGGGGTAATCAAACACAGCAACAATCGGGATCAAGATGGCTGCTTGCAGCTGGCATGGGTAAGGGCAATAAGCATCCCCTGATGAAATCCAAAGCTATTGCGAAG CCAACTAAAGAGGCAGCTGGTCAGTCA GAAGACA CCCTTTGGAGCATTTCTTCACGCGTACATGGAGCTGGAACCAGATGGGGCGAATTAGCTGGACCTAAAAGG AACCCAAATATCCTCCTTCAAAAAGAAAAGCGATTTAGGTGATGGCTTGGCAATTATCAGTATTTAGCTCTTGTGATTTGCTGTCTTGGATGAATCTGTTCAGGGAAGAGTCTATTTATCTGGAACTTTGTCCTCACTGGAATACTTCTAGTGGACTGTTAATGTAAATGTAGTTCCTTTTTCTTGATACACCTTGAACCATCCAGGTACATGCACATGCTTCCGATCGGTTGTGCTCCTTTTCTCCTTGTACTTGGCTGTACTGAGAAACTGGTATTTCTCCTTTTCTTGTTACAATTGAAATAGTGGCTTTTTGCCTGTGAAGGCGCAATAGCAA   TACAGCCTTCTCATGTATGTAGTGGTTCTAGCAT                                    ]
[+] EMBL CF325600             [                                                                                       ATGGATGCTTTAGCTGGAGGGATTGGCAATGCTACCTTTGGCAAGAGTAAGAAAGGGAGATGTACTGATCTGTCATCATCATTAGGTAGGGAAAGCACTTCAGAATATGTTTCACTTGAGGATCTTGCACCATTAGCCATGGAAAAGATTGAAGCCCTTTCCATTGAGGGTCTGAGGATACAATCTGGCATGTCAGAAGAGGATGCACCCTCCAATATCAGTGCCCAGCCTATTGGGGAATTTTCCTCTCTGCAAGGAAAATGTGCAGGGAATACCCTCTCCCTTGGTTTAGAAGGAACCGCAGGGTTACAACTCCTGGATGTCAAACAAAGTGGTGGTGATGTCGATGGACTAATGGGGGTTGTCAATCACTCTTGATGAGTGGATGAGGCTTGATTCTGGCATAGTAGATGAAGATGAGCAGTTCACTGACCGGACGTCAAAGATACTTGCTGCTCACCATGCCAAATCAATGGAATTAGTTGCTGAAAACCAGAATGTGGACAAAAAGAACAGGAGGTCTGGTAGAAGATGGGGGTTTGCTAGGGAACAACTTCACTGTTGCTCTCATGGTTCAACTGCGTGACCCACTACGTAACTATGAGCCAGTTGGCACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF306320             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAG ACAGGAGGTCTGGTAGAAGAT GGGGTTTGCTAGGGAACAACTTCACTGTTGCTCTCATGGTTCAACTGCGTGACCCACTACGTAACTATGAGCCAGTTGGCACGCCGATGCTTGCTTTAATTCAAGTGGAAAGGGTCTTCGTTCCCCCAAAGCCTAAGATATACAGTACTGTCACAGATAAAGGTAACAGTGAGCATGATGATGAGGAGCCCAAGACTGAAGAGGTACTAGAAAAAGCTTTGGTCAAGGAAGAAAAGATTGAGGAAGAAGAAGATTCTGTTCCACAATTTAAAGTCGCAGAAGTGCATGTAGCTGGTTTCAAGAGCGAGCCTGAGAAGACAAAATCATGGGGTAATCAAACACAGCAACAATCGGGATCAAGATGGCTGCTTGCAGCTGGCATGGGTAAGGGCAATAAGCATCCCCTGATGAAATCCAAAGCTATTGCGAAG CCAACTAAAGAGGCAGCTGGTCAGTCA GAAGACA CCCTTTGGAGCATTTCTTCACGCGTACATGGAGCTGGAACCAGATGGGGCGAATTAGCTGGACCTAAAAGG AACCCAAATATCCTCCTTCAAAAAGAAAAGCGATTTAGGTGATGGCTTGGCAATTATCAGTATTTAGCTCTTGTGATTTGCTGTCTTGG                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BQ906695             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GTAATCAAACACAGCCAC ATCGGGATCAAGATGGCTGCTTGCAGCTGGCATGGGTAAGGGCAATAAGCATCCCCTGATGAAATCCAAAGCTATTGCGAAGCCCAACTANAGAGGCAGCTGGTCAGTCA GGAGACAGCCCTTTGGAGCATTTCTTCACGCGTACATGGAGCTGGAACCAGATGGGGCGAGTTAGCTGGACCTAAAAGG AACCCAAATATCCTCCTTCAAAAAGAAAAGCGATTTAGGTGATGGCTTGGCAATTATCAGTATTTAGCTCTTGTGATTTGCTGTCTTGGATGAATCTGTTCAGGGAAGAGTCTATTTATCTGGAACCTTGTCCTCACTGGAATACTTCTAGTGGACTGTTAATGTAAATGTAGTTCCTTTTTCTTGATAaaaaa                                                                                                                                                                                                                        ]
[+] EMBL BI797744             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGGTCAGTCAGGAGGACA CCCTTTGGACCATTTCTTCACGCGTACATGGAGCTGGAACCAGATGGGGCGAGTTAGCTGGACCTAAAAGGTAACCCAAATATCCTCCTTCAAAAAGAAAAGCGATTTAGGTGATGGCTTGGCAATTATCAGTATTTAGCTCTTGTGATTTGCTGTCTTGGATGAATCTGTTCAGGGAAGAGTCTATTTATCTGGAACCTTGTCCTCACTGGAATACTTCTAGTGGACTGTTAATGTAAATGTAGTTCCTTTTTCTTGATACACCTTGAACCATCCAGGTACATGCACATGCTTCCGATCGGTTGTGCTCCTTTTCTCCTTGTACTTGGCTGTACTGAGAAACTGGTATTTCTCCTTTTCTTGTTACAATTGAAATAGTGGCTTTTTGCCTGTGAAGGC C ATAGCAATACTACAGCCTTCTCATGTAaaaa                                                 ]
[+] EMBL AA752021             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     cgagCTTGAA CATCCAGGTACATGCACATGCTTCCGATCGGTTGTGCTCCTTTTCTCCTTGTACTTGGCTGTACTGAGAAACTGGTATTTCTCCTTTTCTTGTTACAATTGAAATAGTGGCTTTTTGCCTGTGAAGGCGCAATAGCAATACTACAGCCTTCTCATGTNTGTAGTGGTTCTAGCATTCATTTGGCCAGTCTTTTAACGGATTTTATACCCAT]




>consensus_9170#0
AATGGCAAAATGATGCAGCAGATTGCTTGGGAGGCTTCTCCAGCTTTAGAGTCTTCTGAA
AGATATGACCTATTGGATAATCATACCATGGATGCTTTAGCTGGAGGGATTGGCAATGCT
ACCTTTGGCAAGAGTAAGAAAGGGAGATGTACTGATCTGTCATCATCATTAGGTAGGGAA
AGCACTTCAGAATATGTTTCACTTGAGGATCTTGCACCATTAGCCATGGAAAAGATTGAA
GCCCTTTCCATTGAGGGTCTGAGGATACAATCTGGCATGTCAGAAGAGGATGCACCCTCC
AATATCAGTGCCCAGCCTATTGGGGAATTTTCCTCTCTGCAAGGAAAATGTGCAGGGAAT
ACCCTCTCCCTTGGTTTAGAAGGAACCGCAGGGTTACAACTCCTGGATGTCAAACAAAGT
GGTGGTGATGTCGATGGACTAATGGGGTTGTCAATCACTCTTGATGAGTGGATGAGGCTT
GATTCTGGCATAGTAGATGAAGATGAGCAGTTCACTGACCGGACGTCAAAGATACTTGCT
GCTCACCATGCCAAATCAATGGAATTAGTTGCTGAAAACCAGAATGTGGACAAAAAGAAC
AGGAGGTCTGGTAGAAGATGGGGTTTGCTAGGGAACAACTTCACTGTTGCTCTCATGGTT
CAACTGCGTGACCCACTACGTAACTATGAGCCAGTTGGCACGCCGATGCTTGCTTTAATT
CAAGTGGAAAGGGTCTTCGTTCCCCCAAAGCCTAAGATATACAGTACTGTCACAGATAAA
GGTAACAGTGAGCATGATGATGAGGAGCCCAAGACTGAAGAGGTACTAGAAAAAGCTTTG
GTCAAGGAAGAAAAGATTGAGGAAGAAGAAGATTCTGTTCCACAATTTAAAGTCGCAGAA
GTGCATGTAGCTGGTTTCAAGAGCGAGCCTGAGAAGACAAAATCATGGGGTAATCAAACA
CAGCAACAATCGGGATCAAGATGGCTGCTTGCAGCTGGCATGGGTAAGGGCAATAAGCAT
CCCCTGATGAAATCCAAAGCTATTGCGAAGCCAACTAAAGAGGCAGCTGGTCAGTCAGAA
GACACCCTTTGGAGCATTTCTTCACGCGTACATGGAGCTGGAACCAGATGGGGCGAATTA
GCTGGACCTAAAAGGAACCCAAATATCCTCCTTCAAAAAGAAAAGCGATTTAGGTGATGG
CTTGGCAATTATCAGTATTTAGCTCTTGTGATTTGCTGTCTTGGATGAATCTGTTCAGGG
AAGAGTCTATTTATCTGGAACCTTGTCCTCACTGGAATACTTCTAGTGGACTGTTAATGT
AAATGTAGTTCCTTTTTCTTGATACACCTTGAACCATCCAGGTACATGCACATGCTTCCG
ATCGGTTGTGCTCCTTTTCTCCTTGTACTTGGCTGTACTGAGAAACTGGTATTTCTCCTT
TTCTTGTTACAATTGAAATAGTGGCTTTTTGCCTGTGAAGGCGCAATAGCAATACAGCCT
TCTCATGTATGTAGTGGTTCTAGCATTCATTTGGCCAGTCTTTTAACGGATTTTATACCC
AT
clustalw multiple alignements is not computed in this case