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Oryza sativa
cluster # 9329 cluster # 9329       Sequences # 6       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9329#0 length = 992 sequences # 6  
consensusID : consensus_9329#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 992
fasta sequence 
                              [TCACTCAGCCAGCATGATGATGAGATTGAGGTTGATATAGATAGCTTTGATGTTGAGACATTATGGGAGCTCGATAGGTTTGTTACAAACTACAAAAAAAGTATAAGCAAGAACAAGCGGAAGGCTGAGAATCCCGTGGCAGGGCAGGATGAGATGAATCATGATATAGAGCTAGAGAAGACAGAGCATGCAAGGTTGGATGAAGTAGAGCAGGATCAGATGCCTCCAGTACAAGAGACGTTACATAATCCTGAGCCAGAATCAATTGATATCGAACCACCTAAAGAAAACACAGCAGATGATAATGAGAGGTATGTAGGCTCATCATCACCTGTTCATTTGGAAGATCAGAAGGGGGAGAATGCGGGTAGATCAAGTAGTTCTGGAAGTTCTAGTAGCGATTCAGGCTCTTCGTCTAGT---------GATACAGACACAGATAGTTCATCAGCAGATGGCTCTGATGCTGCACAGTCACCCAGAACGTAACATCTATAGGCCAGATCTTGATGTCAAGCTGGAAAGTTCACCGACAATTCTGGCATGATATCGTCAGCGAGATTCAATGCTGTCTTGTAAATTTTGGCTATGTAGGAAGTCTAACCAAACCAATGCTTTTGTGTCCATCTCGCTGTCTGTTTTAGACTCATAGTGGGTGCCATAAAATGCACATGCATTTCATGCGTCTGTACCATTGTTTGCAGTTATGTACTTATTGTAGAGTGCTGCGTTTACCCTAATCATTGAGCTGGAAATTATCTAACATTGGATAGAAGAAACCTGCACATTGGGGGAAGCAAGACAACCGGTGAAGACCAGACCAGGAACCTGGAGGCCCCACCCTATTGTAATATTGTAAAATTGCTATAGTAGTTGGGTAATTTCAGCTGTGTTGGATTACCACGGATAAAATGATCTTGCTCTGCTTGTTGTAAGATTTCTGCACAGTCACGTTTGCTCTGGAACTTTGTCTTAATGATGATAGATAGCCCCTGTCC]

[+] EMBL AK060604             [TCACTCAGCCAGCATGATGATGAGATTGAGGTTGATATAGATAGCTTTGATGTTGAGACATTATGGGAGCTCGATAGGTTTGTTACAAACTACAAAAAAAGTATAAGCAAGAACAAGCGGAAGGCTGAGAATCCCGTGGCAGGGCAGGATGAGATGAATCATGATATAGAGCTAGAGAAGACAGAGCATGCAAGGTTGGATGAAGTAGAGCAGGATCAGATGCCTCCAGTACAAGAGACGTTACATAATCCTGAGCCAGAATCAATTGATATCGAACCACCTAAAGAAAACACAGCAGATGATAATGAGAGGTATGTAGGCTCATCATCACCTGTTCATTTGGAAGATCAGAAGGGGGAGAATGCGGGTAGATCAAGTAGTTCTGGAAGTTCTAGTAGCGATTCAGGCTCTTCGTCTAGTGCATATGCAGATACAGACACAGATAGTTCATCAGCAGATGGCTCTGATGCTGCACAGTCACCCAGAACGTAGCATCTATAGGCCAGATCTTGATGTCAAGCTGGAAAGTTCACCGACAATTCTGGCATGATATCGTCAGCGAGATTCAATGCTGTCTTGTAAATTTTGGCTATGTAGGAAGTCTAACCAAACCAATGCTTTTGTGTCCATCTCGCTGTCTGTTT        TAGTGGGTGCCATAAAATGCACATGCATTTCATGCGTCTGTACCATTGTTTGCAGTTATGTACTTATTGTAGAGTGCTGCGTTTACCCTAATCATTGAGCTGGAAATTATCTAACATTGGATAGAAGAAACCTGCACATTGAGGGAAGCAAGACAACCGGTGAAGACCAGACCAGGAACCTGGAGGCCCCACCCTATTGTAATATTGTAAAATTGCTATAGTAGTTGGGTAATTTCAGCTGTGTTGGATTACCACGGATAAAATGATCTTGCTCTGCTTGTTGTAAGATTTCTGCACAGTCACGTTTGCTCTGGAACTTTGTCT                         ]
[+] EMBL CB000494             [                                                                                                                                                                                                                                                                                                              TAATGAGAGGTATGTAGGCTCATCATCACCTCTTCATTTGGAAGATCAGAAGGGGGAGAATGCGGGTAGATCAAGTAGTTCTGGAAGTTCTAGTAGCGATTCAGGCTCTTCGTCTAGT         GATACAGACACAGATAGTTCATCAGCAGATGGCTCTGATGCTGCACAGTCACCCAGAACGTAACATCTATAGGCCAGATCTTGATGTCAAGCTGGAAAGTTCACCGACAATTCTGGCATGATATCGTCAGCGAGATTCAATGCTGTCTTGTAAATTTTGGCTATGTAGGAAGTCTAACCAAACCAATGCTTTTGTGTCCATCTCGCTGTCTGTTTTAGACTCATAGTGGGTGCCATAAAATGCACATGCATTTCATGCGTCTGTACCATTGTTTGCAGTTATGTACTTATTGTAGAGTGCTGCGTTTACCCTAATCATTGAGCTGGAAATTATCTAACATTGGATAGAAGAAACCTGCACATTGGGGGAAGCAAGACAACCGGTGAAGACCAGACCAGGAACCTGGAGGCCCCACCCTATTGTAATATTGTAAAATTGCTATAGTAGTTGGGTAATTTCAGCTGTGTTGGATTACCACGGATAAAATGATCTTGCTCTGCTTGTTGTAAGATTTCTGCACAGTCAC                                              ]
[+] EMBL CA999052             [                                                                                                                                                                                                                                                                                                                ATGAGAGGTATGTAGGCTCATCATCACCTGTTCATTTGGAAGATCAGAAGGGGGAGAATGCGGGTAGATCAAGTAGTTCTGGAAGTTCTAGTAGCGATTCAGGCTCTTCGTCTAGT         GATACAGACACAGATAGTTCATCAGCAGATGGCTCTGATGCTGCACAGTCACCCAGAACGTAACATCTATAGGCCAGATCTTGATGTCAAGCTGGAAAGTTCACCGACAATTCTGGCATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB637460             [                                                                                                                                                                                                                                                                                                                                                                                      AAGTAGTTCTGGAAGTTCTAGTAGCGATTCAGGCTCTTCGTCTAGT         GATACAGACACAGATAGTTCATCAGCAGATGGCTCTGATGCTGCACAGTCACCCAGAACGTAACATCTATAGGCCAGATCTTGATGTCAAGCTGGAAAGTTCACCGACAATTCTGGCATGATATCGTCAGCGAGATTCAATGCTGTCTTGTAAATTTTGGCTATGTAGGAAGTCTAACCAAACCAATGCTTTTGTGTCCATCTCGCTGTCTGTTTTAGACTCATAGTGGGTGCCATAAAATGCACATGCATTTCATGCGTCTGTACCATTGTTTGCAGTTATGTACTTATTGTAGAGTGCTGCGTTTACCCTAATCATTGAGCTGGAAATTATCTAACATTGGATAGAAGAAACCTGCACATTGGGGGAAGCAAGACAACCGGTGAAGACCAGACCAGGAACCTGGAGGCCCCACCCTATTGTAATATTGTAAAATTGCTATAGTAGTTGGGTAATTTCAGCTGTGTTGGATTACCACGGATAAAATGATCTTGCTCTGCTTGTTGTAAGATTTCTGCACAGTCACGTTTGCTCTGGAACTTTGTCTTAATGATGATAGATAGCCCCTGTCC]
[-] EMBL CB640214             [                                                                                                                                                                                                                                                                                                                                                                                                                   CAGGCTCTTCGTCTAGT         GATACAGACACAGATAGTTCATCAGCAGATGGCTCTGATGCTGCACAGTCACCCAGAACGTAACATCTATAGGCCAGATCTTGATGTCAAGCTGGAAAGTTCACCGACAATTCTGGCATGATATCGTCAGCGAGATTCAATGCTGTCTTGTAAATTTTGGCTATGTAGGAAGTCTAACCAAACCAATGCTTTTGTGTCCATCTCGCTGTCTGTTTTAGACTCATAGTGGGTGCCATAAAATGCACATGCATTTCATGCGTCTGTACCATTGTTTGCAGTTATGTACTTATTGTAGAGTGCTGCGTTTACCCTAATCATTGAGCTGGAAATTATCTAACATTGGATAGAAGAAACCTGCACATTGGGGGAAGCAAGACAACCGGTGAAGACCAGACCAGGAACCTGGAGGCCCCACCCTATTGTAATATTGTAAAATTGCTATAGTAGTTGGGTAATTTCAGCTGTGTTGGATTACCACGGATAAAATGATCTTGCTCTGCTTGTTGTAAGATTTCTGCACAGTCACGTTTGCTCTGGAACTTTGTCTT                        ]
[-] EMBL AF521985             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACCGGTGAAGACCAGACCAGGAACCTGGAGGCCCCACCCTGTTGTAATATTGTAAAATTGCTATAGTAGTTGGGTAATTTC                                                                                                                 ]




>consensus_9329#0
TCACTCAGCCAGCATGATGATGAGATTGAGGTTGATATAGATAGCTTTGATGTTGAGACA
TTATGGGAGCTCGATAGGTTTGTTACAAACTACAAAAAAAGTATAAGCAAGAACAAGCGG
AAGGCTGAGAATCCCGTGGCAGGGCAGGATGAGATGAATCATGATATAGAGCTAGAGAAG
ACAGAGCATGCAAGGTTGGATGAAGTAGAGCAGGATCAGATGCCTCCAGTACAAGAGACG
TTACATAATCCTGAGCCAGAATCAATTGATATCGAACCACCTAAAGAAAACACAGCAGAT
GATAATGAGAGGTATGTAGGCTCATCATCACCTGTTCATTTGGAAGATCAGAAGGGGGAG
AATGCGGGTAGATCAAGTAGTTCTGGAAGTTCTAGTAGCGATTCAGGCTCTTCGTCTAGT
GATACAGACACAGATAGTTCATCAGCAGATGGCTCTGATGCTGCACAGTCACCCAGAACG
TAACATCTATAGGCCAGATCTTGATGTCAAGCTGGAAAGTTCACCGACAATTCTGGCATG
ATATCGTCAGCGAGATTCAATGCTGTCTTGTAAATTTTGGCTATGTAGGAAGTCTAACCA
AACCAATGCTTTTGTGTCCATCTCGCTGTCTGTTTTAGACTCATAGTGGGTGCCATAAAA
TGCACATGCATTTCATGCGTCTGTACCATTGTTTGCAGTTATGTACTTATTGTAGAGTGC
TGCGTTTACCCTAATCATTGAGCTGGAAATTATCTAACATTGGATAGAAGAAACCTGCAC
ATTGGGGGAAGCAAGACAACCGGTGAAGACCAGACCAGGAACCTGGAGGCCCCACCCTAT
TGTAATATTGTAAAATTGCTATAGTAGTTGGGTAATTTCAGCTGTGTTGGATTACCACGG
ATAAAATGATCTTGCTCTGCTTGTTGTAAGATTTCTGCACAGTCACGTTTGCTCTGGAAC
TTTGTCTTAATGATGATAGATAGCCCCTGTCC

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)