cluster # 9345

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Oryza sativa
cluster # 9345 cluster # 9345 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9345#0 length = 761 sequences # 6
consensusID : consensus_9345#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 761
fasta sequence
                              [GTCTCTTTTAGGCCTTCACAGTAAAGCTTGGTACTGGTGCTGGTGCCTGCTCCAGAGCAAGATGGCAAGAGGGGCTCAGCCATCTGCATCCCTCCTGCTCTTCTCCCTGGGGCTTGTGCTCCTCTACTTCTCCTCAGGAAGCACCATTCGACTTGCTGAGGGACAGAAAACTTGGTGCGTGGCGAAGCCGT-C-AGCAGATGACAAGGTTCTTACGGCGAATCTCAACTACGCCTGCTCTCAGGTGAACTGTGGAGTGATTCAGCAAGGTGGCCCGTGCTTCAACCCCAACAACCTGGTGTCGCACGCCGCAGTCGCCATGAACCTCTACTATGCTGCCCA-TGGC--AGG-AATGCCTGGAAC-TG-CTAC-TTCCAGAACTCA-GCT-CTCGT-CGTGCAGTCT-GACCCAAGTTAT-GGTTCCTGCACGTACTAC-TGATTTTAAAACTGAGGTCGAGGTCGAGGCAGGGCCTACGCAGCTGAGTTTGTATTAGGATGTCTTTTACTCCCATGTTAGCAGTGCCGAGATTTCGTGGCGATGCCCTAGATCCTCTGATGCTTAGTTTATTGATAAGATGAACATTGATTTGCTCGGATCTTGGATGCTGTTTGTGGCGTCCATTCCCATCAACCTTCATTGGATGTTTGGAAATTCAGACTTGTTGATCCACATGCTTCATTGCTTCCTGTTTCCTAGCATCTCTTGTTTTCAGTTTGATGGAAACCGGGGATTCGTTGAATGAATATATGATTTGTCAAAAAAAAAAAAAAAA]

[+] EMBL AK102517             [GTCTCTTTTAGGCCTTCACAGTAAAGCTTGGTACTGGTGCTGGTGCCTGCTCCAGAGCAAGATGGCAAGAGGGGCTCAGCCATCTGCATCCCTCCTGCTCTTCTCCCTGGGGCTTGTGCTCCTCTACTTCTCCTCAGGAAGCACCATTCGACTTGCTGAGGGACAGAAAACTTGGTGCGTGGCGAAGCCGT C AGCAGATGACAAGGTTCTTACGGCGAATCTCAACTACGCCTGCTCTCAGGTGAACTGTGGAGTGATTCAGCAAGGTGGCCCGTGCTTCAACCCCAACAACCTGGTGTCGCACGCCGCAGTCGCCATGAACCTCTACTATGCTGCCCA TGGC  AGG AATGCCTGGAAC TG CTAC TTCCAGAACTCA GCT CTCGT CGTGCAGTCT GACCCAAGTTAT GGTTCCTGCACGTACTAC TGATTTTAAAACTGAGGTCGAGGTCGAGGCAGGGCCTACGCAGCTGAGTTTGTATTAGGATGTCTTTTACTCCCATGTTAGCAGTGCCGAGATTTCGTGGCGATGCCCTAGATCCTCTGATGCTTAGTTTATTGATAAGATGAACATTGATTTGCTCGGATCTTGGATGCTGTTTGTGGCGTCCATTCCCATCAACCTTCATTGGATGTTTGGAAATTCAGACTTGTTGATCCACATGCTTCATTGCTT                                                                                        ]
[+] EMBL OS1321624            [                             GGTACTGGTGCTGGTGCCTGCTCCAGAGCAAGATGGCAAGAGGGGCTCAGCCATCTGCATCCCTCCTGCTCTTCTCCCTGGGGCTTGTGCTCCTCTACTTCTCCTCAGGAAGCACCATTCGACTTGCTGAGGGACAGAAAACTTGGTGCGTGGCGAA  NGTNC AGCAGATGACAAGGTTCTTACGGCGAATCTCAACTACGCCTGCTCTCAGGTGAACTGTGGAGTGATTCAGCAAGGTGGCCCGTGCTTCAACCCCAACAACCTGGTGTCGCACGCCGCAGTCGCCATGAACCTCTACTATGCTGCCCA TGGC  AGGAAATGCCTGGAAC TG CTACTTTCCAGAACTCA GCT CTCGT CGTGCAGTCT GACCCAAGTTATGGGTTCCTGCACGTACTACTTGATTTTAAAACTGAGGTCGAGNTCGAGGCAGGGCCTACGNAGCTGAG                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK059681             [                                                   CCAGAGCAAGATGGCAAGAGGGGCTCAGCCATCTGCATCCCTCCTGCTCTTCTCCCTGGGGCTTGTGCTCCTCTACTTCTCCTCAGGAAGCACCATTCGACTTGCTGAGGGACAGAAAACTTGGTGCGTGGCGAAGCCGT C AGCAGATGACAAGGTTCTTACGGCGAATCTCAACTACGCCTGCTCTCAGGTGAACTGTGGAGTGATTCAGCAAGGTGGCCCGTGCTTCAACCCCAACAACCTGGTGTCGCACGCCGCAGTCGCCATGAACCTCTACTATGCTGCCCA TGGC  AGG AATGCCTGGAAC TG CTAC TTCCAGAACTCA GCT CTCGT CGTGCAGTCT GACCCAAGTTAT GGTTCCTGCACGTACTAC TGATTTTAAAACTGAGGTCGAGGTCGAGGCAGGGCCTACGCAGCTGAGTTTGTATTAGGATGTCTTTTACTCCCATGTTAGCAGTGCCGAGATTTCGTGGCGATGCCCTAGATCCTCTGATGCTTAGTTTATTGATAAGATGAACATTGATTTGCTCGGATCTTGGATGCTGTTTGTGGCGTCCATTCCCATCAACCTTCATTGGATGTTTGGAAATTCAGACTTGTTGATCCACATGCTTCATTGCTTCCTGTTTCCTAGCATCTCTTGTTTTCAGTTTGATGGAAACCGGGGATTCGTTGAATGAATATATGA                      ]
[+] EMBL AU029844             [                                                                                                                                                                   CAGAAAACTTGGTGCGTGGCGAA  CGT CNAGCAGATGACAAGGTTCTTACGGCGAATCTCAACTACGCCTGCTCTCAGGTGAACTGTGGAGTGATTCAGCAAGGTGGCCCGTGCTTCAACCCCAACAACCTGGTGTCGCACGCCGCAGTCGCCATGAACCTCTACTATGCTGCCCA TGGC  AGG AATGCCTGGAACTTG CTAC TTCCAGAACTCA GCT CTCGT CGTGCAGTCTGGACCCAAGTTAT GGTTCCTGCACGTACNAC TGATTTTAAAACTGAGGTCGAGGTCGANGCAGGGCCTACGCA CTGAGTTTGTATTAGa                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU077690             [                                                                                                                                                                                                                                                                                                                               TGAACCTCTACTATGCTGCCCA TGGC  AGG AATGCCTGGAAC TG CTACTTTCCNGAACTCA GCT CTCGT CGTGCAGTCT GACCCAAGTTAT GGTTCCTGCACGTACTAC TGATTTTAAAACTGAGGTCGAGGTCGAGGCAGGGCCTACGCAGCTGAGTTTGTATTAGGATGTCTTTTACTCCCATGTTAGCNGTGCCGAGATTTCGTGGCGATGCCCTAGATCCTCTGATGCTTAGTTTATTGATAAGATGAACATTGATTTGCTCGGATCTTGGATGCTGTTTGTGGCGTCCATTCCCATCAACCTTCATTGGATGTTTGGAAATTCAGACTTGTTGATCCACATGCTTCATTGCTTCCTGTTTCCTAGCATCTCTTGTTTTCAGTTTGATGGAAACCGGGGATTCGTTGAATGAATATATGATTTGTCAAAAAAAAAAAAAAAA]
[+] EMBL AU161777             [                                                                                                                                                                                                                                                                                                                                 tctacCTACT NGCTGCCCATTGGCCAAGG AATGCCTGGAAC TGCCTAC TTCCAGAACTCAGGCTNCTCGTCCGTGCAGTCT GACCCAAGTTAT GGTTCCTGCACGTACTAC TGATTTTAAAACTGAGGTCGAGGTCGA GCAGGGCCTACGCAGCTGAGTTTGTATTAGGATGTCTTTTACTCCCATGTTAGCAGTGCCGAGATTTCGTGGCGATGCCCTAGATCCTCTGATGCTTAGTTTATTGATAAGATGAACATTGATTTGCTCGGATCTTGGATGCTGTTTGTGGCGTCCATTCCCATCAACCTTCATTGGATGTTTGGAAATTCAGACTTGTTGATCCACATGCTTCATTGCTTCCTGTTTCCTAGCATCTCTTGTTTTCAGTTTGATGGAAACCGGGGATTCGTTGAATGAAaaaa                         ]




>consensus_9345#0
GTCTCTTTTAGGCCTTCACAGTAAAGCTTGGTACTGGTGCTGGTGCCTGCTCCAGAGCAA
GATGGCAAGAGGGGCTCAGCCATCTGCATCCCTCCTGCTCTTCTCCCTGGGGCTTGTGCT
CCTCTACTTCTCCTCAGGAAGCACCATTCGACTTGCTGAGGGACAGAAAACTTGGTGCGT
GGCGAAGCCGTCAGCAGATGACAAGGTTCTTACGGCGAATCTCAACTACGCCTGCTCTCA
GGTGAACTGTGGAGTGATTCAGCAAGGTGGCCCGTGCTTCAACCCCAACAACCTGGTGTC
GCACGCCGCAGTCGCCATGAACCTCTACTATGCTGCCCATGGCAGGAATGCCTGGAACTG
CTACTTCCAGAACTCAGCTCTCGTCGTGCAGTCTGACCCAAGTTATGGTTCCTGCACGTA
CTACTGATTTTAAAACTGAGGTCGAGGTCGAGGCAGGGCCTACGCAGCTGAGTTTGTATT
AGGATGTCTTTTACTCCCATGTTAGCAGTGCCGAGATTTCGTGGCGATGCCCTAGATCCT
CTGATGCTTAGTTTATTGATAAGATGAACATTGATTTGCTCGGATCTTGGATGCTGTTTG
TGGCGTCCATTCCCATCAACCTTCATTGGATGTTTGGAAATTCAGACTTGTTGATCCACA
TGCTTCATTGCTTCCTGTTTCCTAGCATCTCTTGTTTTCAGTTTGATGGAAACCGGGGAT
TCGTTGAATGAATATATGATTTGTCAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case