cluster # 9445

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Oryza sativa
cluster # 9445 cluster # 9445 Sequences # 6 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9445#0 length = 438 sequences # 6

consensusID : consensus_9445#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 438
fasta sequence

                              [TAGAAGAAAAAATTTTAATCGTATATATATTTATGGCATGTAAAGAGCCTCCAATCCTTGGCAATCCACGCTCCAATCATGATCAGGAGCGCCGATCATGCACTCATGGAGGCTCATGGCGTCGTCGGGAAACGAATCCAACGAGTCGTACTTGGGCTCCTCCCATGTCGACAAGCTCGGCACGATCGAGCACCACGACGACAGGCTGCCGGCGCCGGCGACGTCCGTGGGCAAACCTAGCGAGTCGAAGCAGCTCTGATCCATGGCGAAGTTGAGCTCGCCGAGCGCGGC-TTGCACGCTCGCGTCCGT-GCACAGCATGGAGGTGGTTGCGGTGGTTGCAGTACTCGTCGGGTCGTTGCCGCTCGCTGGACTGGACCACTCGCCGAACCCGTCCTGGTTCGGGTCGAA-TTCGCCGACGCCG-CG-CAAGATGCCGGGGGT]

[+] EMBL AU066081             [TANAAGAAAAAATTTTAATCGTATATATATTTATGGCATGTAAAGAGCCTCCAATCCTTGGCAATCCACGCTCCAATCATGATCAGGAGCGCCGATCATGCACTCATGGAGGCTCATGGCGTCGTCGGGAAACGAATCCAACGAGTCGTACTTGGGNTCCTCCCATGTCGACAAGCTCGGCACGATCGAGCACCACGACGACAGGCTGCCGGCGCCGGCGACGTCCGTGGGCAAACCTAGCGAGTCGAAGCAGCTCTGATCCATGGCGAAGTTGAGCTCGCCGAGCGCGGCTTTGCACGCTCGCGTCCGT GCACAGCATGGAGGTGGTTNCGGTGGTTGCAGTACTCGTCGGGTCGTTGCCGCTCGCTGGACTTGACCACTCGCCGAACCCGTCCTGGGTCGGGTCGAA TTCGCCGACGCCG CG CAAGATGCCGGGGGT]
[+] EMBL OSS2584A             [TAGAAG AAAAANTTTAATCGTATATATATTTATGGCATGTAAAGAGCCTCCAATCCTTGGCAATCCACGCTCCAATCATGATCAGGAGCGCCGATCATGCACTCATGGAGGCTCATGGCGTCGTCGGGAAACGAATCCAACGAGTCGTACTTGGGCTCCTCCCATGTCGACAAGCTCGGCACGATCGAGCACCACGACGACAGGCTGCCGGCGCCGGCGACGTCCGTGGGCAAACCTAGCGAGTCGAAGCAGCTCTGATCCATGGCGAAGTTGAGCTCGCCGAGCGCGGT TTGCACGCTCGCNTCCGT GCACAGCATGGAGGTGGTTGCGGTGGTTGCAGTACTCGTCGGGTCGTTGCCGCTCGCTGGACTGGACCACTCGCCGAACCCGTCCTGGT                                           ]
[+] EMBL AU066096             [TAGAAGAAAAAATTTTAATCGTATATATATTTATGGCATGTAAAGAGCCTCCAATCCTTGGCAATCCACGCTCCAATCATGATCAGGAGCGCCGATCATGCACTCATGGAGGCTCATGGCGTCGTCGGGAAACGAATCCAACGAGTCGTACTTGGGCTCCTCCCATGTCGACAAGCTCGGCACGATCGAGCACCACGACGACAGGCTGCCGGCGCCGGCGACGTCCGTGGGCAAACCTAGCGAGTCGAAGCAGCTCTGATCCATGGCGAAGTTGAGCTCGCCGAGCGCGGC TTGCACGCTCGCGTCCGT GCACAGCAT                                                                                                                           ]
[+] EMBL OSS3650A             [nAGAAGAAAAAATTTTAATCGTATATATATTTATGGCATGTAAAGAGCCTCCAATCCTTGGCAATCCACGCTCCAATCATGATCAGGAGCGCCGATCATGCACTCATGGAGGCTCATGGCGTCGTCGGGAAACGAATCCAACGAGTCGTACTTGGGCTCCTCCCATGTCGACAAGCTCGGCACGATCGAGCACCACGACGACAGGCTGCCGGCGCCGGCNACGTCCGTGGGCAAACCTAGCGAGTCGAAGCAGCTCTGATCCATGGCGAAGTTGAGCTCGCCGAGCGCGGC TTGCACGCTCGCNTCCGT GCACAGCATGGAGGTGGTTGCGGTGGTTGCAGTACTCGTCGGGTCGTTGCCGCTCGCTGGACTGGACCACTCGNCGAACCCGTCCTGGTTCGGGTCGAACTNCGCCGACGCCGCCGCCAAGATG        ]
[-] EMBL OSC6351              [ AGAAG AAAAATTTTAATCGTATATATATTTATGGCATGTAAAGNGCCTCCAATCCTTGGCAATCCACGCTCCAATCATGATCAGGAGCGCCGATCATGCACTCATGGAGGCTCATGGCGTCGTCGGGAAACGAATCCAACGAGTCGTACTTGGGCTCCTCCCATGTCGACAAGCTCGGCACGATCGAGCACCACGACGACAGGCTGCCGGCGCCGGCGACGTCCGTGGGCAAACCTAGCGAGTCGAAGCAGCTCTGATCCATGGCGAAGTTGAGCTCGCCGAGCGCGGC TTGCACGCTCGCNTCCGT GCACAGCATGGAGGTGGTTGCGGTGGTTGCAGTACTCGTCGGGTCGTTGCCGCTCGCTGGAC                                                                      ]
[-] EMBL AU097303             [ AGAAGAAAAAATTTTAATCGTATATATATTTATGGCATGTAAAGAGCCTCCAATCCTTGGCAATCCACGCTCCAATCATGATCAGGAGCGCCGATCATGCACTCATGGAGGCTCATGGCGTCGTCGGGAAACGAATCCAACGAGTCGTACTTGGGCTCCTCCCATGTCGACAAGCTCGGCACGATCGAGCACCACGACGACAGGCTGCCGGCGCCGGCGACGTCCGTGGGCAAACCTAGCGAGTCGAAGCAGCTCTGATCCATGGCGAAGTTGAGCTCGCCGAGCGCGGC TTGCACGCTCGCGTCCGTGGCACAGCATGGANGTGGTTGCGGTGGTTGCAGTACTCGTC                                                                                            ]




>consensus_9445#0
TAGAAGAAAAAATTTTAATCGTATATATATTTATGGCATGTAAAGAGCCTCCAATCCTTG
GCAATCCACGCTCCAATCATGATCAGGAGCGCCGATCATGCACTCATGGAGGCTCATGGC
GTCGTCGGGAAACGAATCCAACGAGTCGTACTTGGGCTCCTCCCATGTCGACAAGCTCGG
CACGATCGAGCACCACGACGACAGGCTGCCGGCGCCGGCGACGTCCGTGGGCAAACCTAG
CGAGTCGAAGCAGCTCTGATCCATGGCGAAGTTGAGCTCGCCGAGCGCGGCTTGCACGCT
CGCGTCCGTGCACAGCATGGAGGTGGTTGCGGTGGTTGCAGTACTCGTCGGGTCGTTGCC
GCTCGCTGGACTGGACCACTCGCCGAACCCGTCCTGGTTCGGGTCGAATTCGCCGACGCC
GCGCAAGATGCCGGGGGT

clustalw multiple alignements is not computed in this case