cluster # 9516

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Oryza sativa
cluster # 9516 cluster # 9516 Sequences # 6 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9516#0 length = 1143 sequences # 4

consensus_9516#1 length = 808 sequences # 1
consensus_9516#2 length = 447 sequences # 1

consensusID : consensus_9516#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1143
fasta sequence

                              [CTCGGCGCATCCACGCAACCCACCCGTCGCGAGTCGCGAGCAGATCAAAAACCCCATCGCCGCGGCGATCACCGGAGGGACCAGGCCGGGCGGCCATCCGTACTCCGCCGCGATGATGAACGACGGCGATGTGGCGCGGCAGCTGAAGCAGATGACGGACTTCATCCGCCAGGAGGCCGTCGAGAAGGCCGCCGAGATCGAGGCCGCCGCCGCCGAGGAATTTCAAATCGAGAAACTACAGCTGGTGGAAGCTGAAAAGAAGAGGATCAGGTTGGAATTTGAACGGAACGAGAAGCAAGGTGATATCAAGAAGAAAATTGAATACTCAAAGCAGCTCAATGCTTCCCGACTTGAAGTTCTGCAAGCTCAAGATGATTTAGCGATGTCTATGTTGGAGGCAGCAGGGAAAGAGCTACTGTACATAACCCGAGATCACCATGTATACAAGAATCTTCTTAGGATATTTATTGTTCAGAGCTTGCTGCGTTTGAAGGAGCCAGCTGTGATTCTGCGCTGCAGGAAGGAGGATCGTGAGCTTGTTGAATCAGTTTTGGAGTCTGCAAAGAATGAATATGCAGACAAAGCAAATATATATCCTCCTGAAATAATGGTAGACCGTAATGTCTATCTGCCTCCTGCTCCCAGTCATTATGAGGCACATGGACCCTCCTGCTCTGGTGGAGTTGTGCTAGCTTCCCGAGATGGAAAGAT-AGTCTGTGAAAATACATTGGATGCTAGACTAG-AGGTGGTTTTCAGAAAGAAGCTACCAGAGATTCGTCGAAGCC-TTC-TTGGGCAGGTAGCTGCTT-GACCGATTCATAAATACAGGATGCTGCACAATACCGTTTTCTTCTGCATGATGGTGTCAAAGAAAGCATTTTGGCAGTTAAAATGATTTATCACTTTGCTCAAGTCTGTTACATATATATTTTTTATAGGGAGCCACTGTCATCAAACTACAGACCTTAGTATTGCCGATAGCGAATAAATTGATATGTTCATGTTGCTCACGATTTCTCATAATAAGGCCTAAGAGGTGTAGTTATCCCATTTATATGTTCATCTTTTCTCACAGAAGACAATCCATTGTCATTTATTCATCTGTTATTTGTTTTTGTTTTCATGGAAATAATATACCAAGGCCTC]

[+] EMBL AK072778             [CTCGGCGCATCCACGCAACCCACCCGTCGCGAGTCGCGAGCAGATCAAAAACCCCATCGCCGCGGCGATCACCGGAGGGACCAGGCCGGGCGGCCATCCGTACTCCGCCGCGATGATGAACGACGGCGATGTGGCGCGGCAGCTGAAGCAGATGACGGACTTCATCCGCCAGGAGGCCGTCGAGAAGGCCGCCGAGATCGAGGCCGCCGCCGCCGAGGAATTTCAAATCGAGAAACTACAGCTGGTGGAAGCTGAAAAGAAGAGGATCAGGTTGGAATTTGAACGGAACGAGAAGCAAGGTGATATCAAGAAGAAAATTGAATACTCAAAGCAGCTCAATGCTTCCCGACTTGAAGTTCTGCAAGCTCAAGATGATTTAGCGATGTCTATGTTGGAGGCAGCAGGGAAAGAGCTACTGTACATAACCCGAGATCACCATGTATACAAGAATCTTCTTAGGATATTTATTGTTCAGAGCTTGCTGCGTTTGAAGGAGCCAGCTGTGATTCTGCGCTGCAGGAAGGAGGATCGTGAGCTTGTTGAATCAGTTTTGGAGTCTGCAAAGAATGAATATGCAGACAAAGCAAATATATATCCTCCTGAAATAATGGTAGACCGTAATGTCTATCTGCCTCCTGCTCCCAGTCATTATGAGGCACATGGACCCTCCTGCTCTGGTGGAGTTGTGCTAGCTTCCCGAGATGGAAAGAT AGTCTGTGAAAATACATTGGATGCTAGACTAG AGGTGGTTTTCAGAAAGAAGCTACCAGAGATTCGTCGAAGCC TTC TTGGGCAGGTAGCTGCTT GACCGATTCATAAATACAGGATGCTGCACAATACCGTTTTCTTCTGCATGATGGTGTCAAAGAAAGCATTTTGGCAGTTAAAATGATTTATCACTTTGCTCAAGTCTGTTACATATATATTTTTTATAGGGAGCCACTGTCATCAAACTACAGACCTTAGTATTGCCGATAGCGAATAAATTGATATGTTCATGTTGCTCACGATTTCTCATAATAAGGCCTAAGAGGTGTAGTTATCCCATTTATATGTTCATCTTTTCTCACAGAAGACAATCCATTGTCATTTATTCATCTGTTATTTGTTTTTGTTTTCATGGAAATAATATACCAAGGCCTC]
[+] EMBL OSS1808A             [                               AGTCGCGAGCAGATCAAAAACCCCATCGCCGCGGCGATCACCGGAGGGACCAGGCCGGGCGGCCATCCGTACTCCGCCGCGATGATGAACGACGGCGATGTGGCGCGGCAGCTGAAGCAGATGACGGACTTCATCCGCCAGGAGGCCGTCGAGAAGGCCGCCGAGATCGAGGCCGCCGCCGCCGAGGAATTTCAAATCGAGAAACTACAGCTGGTGGAAGCTGAAAAGAAGAGGATCAGGTTGGAATTTGAACGGAACGAGAAGCAAGGTGATATCAAGAAGAAAATTGAATACTCAAAGCAGCTCAATGCTTCCCGACTTGAAGTTCTGCAAGCTCAAGATGATTTAGCGATGTCTATGTTGGAGGCAGCAGGGAAAGAGCTACTGTACATAACCCGAGATCACCATGTATACAAGAATCTTCTTAGGATATTTATTGTTCAGAGCTTGCTGCGTTTGAAGGAGCCAGCTGTGATTCTGCGCTGCAGGAAGGAGGATCGTGAGCTTGTTGAATCAGTTTTGGAGTCTGCAAAGAATGAATATGCAGACAAAGCAAATATATATCCTCCTGAAATAATGGTAGACCGTAATGTCTATCTGCCTCCTGCTCCCAGTCATTATGAGGCACATGGACCCTCCTGCTCTGGTGGAGTTGTGCTAGCTTNCCGAGATGGNAAGATAAGTCTGTG AAATACATTGGATGCTAGACTAGAANGTGGTTTTCAGAAAGAAGCTACCAGAGATTCGTCGAAGCCTTTCNTTGGGCAAGTAACTGCTTNAACCGATTCATAAATACcanggt                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL OSS1834A             [                               AGTCGCGAGCAGATCAAAAACCCCATCGCCGCGGCGATCACCGGAGGGACCAGGCCGGGCGGCCATCCGTACTCCGCCGCGATGATGAACGACGGCGATGTGGCGCGGCAGCTGAAGCAGATGACGGACTTCATCCGCCAGGAGGCCGTCGAGAAGGCCGCCGAGATCGAGGCCGCCGCCGCCGAGGAATTTCAAATCGAGAAACTACAGCTGGTGGAAGCTGAAAAGAAGAGGATCAGGTTGGAATTTGAACGGAACGAGAAGCAAGGTGATATCAAGAAGAAAATTGAATACTCAAAGCAGCTCAATGCTTCCCGACTTGAAGTTCTGCAAGCTCAAGATGATTTAGCGATGTCTATGTTGGAGGCAGCAGGGAAAGAGCTACTGTACATAACCCGAGATCACCATGTATACAAGAATCTTCTTAGGATATTTATTGTTCAGAGCTTGCTGCGTTTGAAGGAGCCAGCTGTGATTCTGCGCTGCAGGAAGGAGGATCGTGAGCTTGTTGAATCAGTTTTGGAGTCTGCAAAGAATGAATATGCAGACNAAGCNAATATATATCCTCCTGAAATAATGGTAGACCGTAATGTCTATCTG CTCCTGCTNCCAGTCATTATGANGCACATGGANCCTtcc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL OSS1996A             [                               AGTCG GAGCAGATCAAAAACCCCATCGCCGCGGC ATCACCGGA GGACCAGGCCGGGCGG CATCCGTACTCCGCCGCGATGATGAACGACGGCGATGTGGCGCGGCA NTGAAGCAGATGACGGACTTCATCCGCCA GAGGCCGTCGAGAAGGCCGCCGAGATCGAGGCCGCCGCCGCCGAGGAATTTCAAATCGAGAAACTACAGCTGGTGGAAGCTGAAAAGAAGAGGATCAGGTTGGAATTTGAACGGAACGAGAAGCAAGGTGATATCAAGAAGAAAATTGAATACTCAAAGCAGCTCAATGCTTCCCGACTTGAAGTTCTNC ANCTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]




>consensus_9516#0
CTCGGCGCATCCACGCAACCCACCCGTCGCGAGTCGCGAGCAGATCAAAAACCCCATCGC
CGCGGCGATCACCGGAGGGACCAGGCCGGGCGGCCATCCGTACTCCGCCGCGATGATGAA
CGACGGCGATGTGGCGCGGCAGCTGAAGCAGATGACGGACTTCATCCGCCAGGAGGCCGT
CGAGAAGGCCGCCGAGATCGAGGCCGCCGCCGCCGAGGAATTTCAAATCGAGAAACTACA
GCTGGTGGAAGCTGAAAAGAAGAGGATCAGGTTGGAATTTGAACGGAACGAGAAGCAAGG
TGATATCAAGAAGAAAATTGAATACTCAAAGCAGCTCAATGCTTCCCGACTTGAAGTTCT
GCAAGCTCAAGATGATTTAGCGATGTCTATGTTGGAGGCAGCAGGGAAAGAGCTACTGTA
CATAACCCGAGATCACCATGTATACAAGAATCTTCTTAGGATATTTATTGTTCAGAGCTT
GCTGCGTTTGAAGGAGCCAGCTGTGATTCTGCGCTGCAGGAAGGAGGATCGTGAGCTTGT
TGAATCAGTTTTGGAGTCTGCAAAGAATGAATATGCAGACAAAGCAAATATATATCCTCC
TGAAATAATGGTAGACCGTAATGTCTATCTGCCTCCTGCTCCCAGTCATTATGAGGCACA
TGGACCCTCCTGCTCTGGTGGAGTTGTGCTAGCTTCCCGAGATGGAAAGATAGTCTGTGA
AAATACATTGGATGCTAGACTAGAGGTGGTTTTCAGAAAGAAGCTACCAGAGATTCGTCG
AAGCCTTCTTGGGCAGGTAGCTGCTTGACCGATTCATAAATACAGGATGCTGCACAATAC
CGTTTTCTTCTGCATGATGGTGTCAAAGAAAGCATTTTGGCAGTTAAAATGATTTATCAC
TTTGCTCAAGTCTGTTACATATATATTTTTTATAGGGAGCCACTGTCATCAAACTACAGA
CCTTAGTATTGCCGATAGCGAATAAATTGATATGTTCATGTTGCTCACGATTTCTCATAA
TAAGGCCTAAGAGGTGTAGTTATCCCATTTATATGTTCATCTTTTCTCACAGAAGACAAT
CCATTGTCATTTATTCATCTGTTATTTGTTTTTGTTTTCATGGAAATAATATACCAAGGC
CTC

consensusID : consensus_9516#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 808
fasta sequence

                              [AGGATGAGACAGGGGGGATCGTGAGCTTGTTGAATNGTTTTGGACTCTGCAAAGAATGAATATGCAGACAAAGCAAATATATATCCTCCTGAAATAATGGTAGACCGTAATGTCTATCTGCCTCCTGCTCCCAGTCATTATGAGGCACATGGACCCTCCTGCTCTGGTGGAGTTGTGCTAGCTTCCCGAGATGGAAAGATAGTCTGTGAAAATACATTGGATGCTAGACTAGAGGTGGTTTTCAGAAGGAAGCTACCAGAGATTCGTCGAAGCCTTCTTGGGCAGGTAGCTGCTTGACCGATTCATAAATACAGGATGCTGCACAATACCGTTTTCTTCTGCATGATGGTGTCAAAGAAAGCATTTTGGCAGTTAAAATGATTTATCACTTTGCTCAAGTCTGTTACATATAAATTTTTATAGGGAGCCACTGTCATCAAACTACAGACCTTAGTATTGCCGATAGCGAATAAATTGATATGTTCATGTTGCTCACGATTTCTCATAATAAGGCCTAAGAGGTGTAGTTATCCCATTTATATGTTCATCTTTTCTCACAGAAGACAATCCATTGTCATTTATTCATCTGTTATTTGNTTTTGGTTTCATGGAAATAATATACCAAGGCCTCTCTTAGAATGAATAAATAGAAGATTTGGAAGTGCCCTGCAGTGCAAGATAAACTGAAATTCTACAGATGCATCATTGGNCTAGNTTTATCTGACATCCCTTTCTCTAAGAATTCCCCAACCCAGGCTTTTGGCCGCTTGTACAGAGTTTAATGAAGTTGAACTGCACTGCTGGTTTC]

[+] EMBL CA765590             [AGGATGAGACAGGGGGGATCGTGAGCTTGTTGAATNGTTTTGGACTCTGCAAAGAATGAATATGCAGACAAAGCAAATATATATCCTCCTGAAATAATGGTAGACCGTAATGTCTATCTGCCTCCTGCTCCCAGTCATTATGAGGCACATGGACCCTCCTGCTCTGGTGGAGTTGTGCTAGCTTCCCGAGATGGAAAGATAGTCTGTGAAAATACATTGGATGCTAGACTAGAGGTGGTTTTCAGAAGGAAGCTACCAGAGATTCGTCGAAGCCTTCTTGGGCAGGTAGCTGCTTGACCGATTCATAAATACAGGATGCTGCACAATACCGTTTTCTTCTGCATGATGGTGTCAAAGAAAGCATTTTGGCAGTTAAAATGATTTATCACTTTGCTCAAGTCTGTTACATATAAATTTTTATAGGGAGCCACTGTCATCAAACTACAGACCTTAGTATTGCCGATAGCGAATAAATTGATATGTTCATGTTGCTCACGATTTCTCATAATAAGGCCTAAGAGGTGTAGTTATCCCATTTATATGTTCATCTTTTCTCACAGAAGACAATCCATTGTCATTTATTCATCTGTTATTTGNTTTTGGTTTCATGGAAATAATATACCAAGGCCTCTCTTAGAATGAATAAATAGAAGATTTGGAAGTGCCCTGCAGTGCAAGATAAACTGAAATTCTACAGATGCATCATTGGNCTAGNTTTATCTGACATCCCTTTCTCTAAGAATTCCCCAACCCAGGCTTTTGGCCGCTTGTACAGAGTTTAATGAAGTTGAACTGCACTGCTGGTTTC]




>consensus_9516#1
AGGATGAGACAGGGGGGATCGTGAGCTTGTTGAATNGTTTTGGACTCTGCAAAGAATGAA
TATGCAGACAAAGCAAATATATATCCTCCTGAAATAATGGTAGACCGTAATGTCTATCTG
CCTCCTGCTCCCAGTCATTATGAGGCACATGGACCCTCCTGCTCTGGTGGAGTTGTGCTA
GCTTCCCGAGATGGAAAGATAGTCTGTGAAAATACATTGGATGCTAGACTAGAGGTGGTT
TTCAGAAGGAAGCTACCAGAGATTCGTCGAAGCCTTCTTGGGCAGGTAGCTGCTTGACCG
ATTCATAAATACAGGATGCTGCACAATACCGTTTTCTTCTGCATGATGGTGTCAAAGAAA
GCATTTTGGCAGTTAAAATGATTTATCACTTTGCTCAAGTCTGTTACATATAAATTTTTA
TAGGGAGCCACTGTCATCAAACTACAGACCTTAGTATTGCCGATAGCGAATAAATTGATA
TGTTCATGTTGCTCACGATTTCTCATAATAAGGCCTAAGAGGTGTAGTTATCCCATTTAT
ATGTTCATCTTTTCTCACAGAAGACAATCCATTGTCATTTATTCATCTGTTATTTGNTTT
TGGTTTCATGGAAATAATATACCAAGGCCTCTCTTAGAATGAATAAATAGAAGATTTGGA
AGTGCCCTGCAGTGCAAGATAAACTGAAATTCTACAGATGCATCATTGGNCTAGNTTTAT
CTGACATCCCTTTCTCTAAGAATTCCCCAACCCAGGCTTTTGGCCGCTTGTACAGAGTTT
AATGAAGTTGAACTGCACTGCTGGTTTC

consensusID : consensus_9516#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 447
fasta sequence

                              [ACCCNCCTGCTCTGGTGGAGTTGTGCTAGCTTCCCGAGATGGAAAGATAGTCTNTGAAAATACATTGGATGCTAGACTAGAGGTGGTTTTCAGAAAGAAGCTNCCAGAGATTCGTCGAAGCCTTNTTGGGCAGGTAGCTGCTTGNCCGATTCATAAATACAGGATGCTGCACAATNCCGTTTTCTTCTGCATGATGGTGTCAAAGAAAGCATTTTGGCAGTTAAAATGATTTATCACTTTGCTCAAGTCTGTTACATATATATTTTTTATAGGGNGCCNCTGTCATCAAACTACAGNCCTTAGTATTGCCGATAGCGAATAAATTGATATGTTCATGTTGCTCNCGATTTCTCATAATAAGGCCTAAGAGGTGTAGTTATCCCATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU083572             [ACCCNCCTGCTCTGGTGGAGTTGTGCTAGCTTCCCGAGATGGAAAGATAGTCTNTGAAAATACATTGGATGCTAGACTAGAGGTGGTTTTCAGAAAGAAGCTNCCAGAGATTCGTCGAAGCCTTNTTGGGCAGGTAGCTGCTTGNCCGATTCATAAATACAGGATGCTGCACAATNCCGTTTTCTTCTGCATGATGGTGTCAAAGAAAGCATTTTGGCAGTTAAAATGATTTATCACTTTGCTCAAGTCTGTTACATATATATTTTTTATAGGGNGCCNCTGTCATCAAACTACAGNCCTTAGTATTGCCGATAGCGAATAAATTGATATGTTCATGTTGCTCNCGATTTCTCATAATAAGGCCTAAGAGGTGTAGTTATCCCATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_9516#2
ACCCNCCTGCTCTGGTGGAGTTGTGCTAGCTTCCCGAGATGGAAAGATAGTCTNTGAAAA
TACATTGGATGCTAGACTAGAGGTGGTTTTCAGAAAGAAGCTNCCAGAGATTCGTCGAAG
CCTTNTTGGGCAGGTAGCTGCTTGNCCGATTCATAAATACAGGATGCTGCACAATNCCGT
TTTCTTCTGCATGATGGTGTCAAAGAAAGCATTTTGGCAGTTAAAATGATTTATCACTTT
GCTCAAGTCTGTTACATATATATTTTTTATAGGGNGCCNCTGTCATCAAACTACAGNCCT
TAGTATTGCCGATAGCGAATAAATTGATATGTTCATGTTGCTCNCGATTTCTCATAATAA
GGCCTAAGAGGTGTAGTTATCCCATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9516#0      CTCGGCGCATCCACGCAACCCACCCGTCGCGAGTCGCGAGCAGATCAAAAACCCCATCGC 60
consensus_9516#2      ------------------------------------------------------------
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      CGCGGCGATCACCGGAGGGACCAGGCCGGGCGGCCATCCGTACTCCGCCGCGATGATGAA 120
consensus_9516#2      ------------------------------------------------------------
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      CGACGGCGATGTGGCGCGGCAGCTGAAGCAGATGACGGACTTCATCCGCCAGGAGGCCGT 180
consensus_9516#2      ------------------------------------------------------------
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      CGAGAAGGCCGCCGAGATCGAGGCCGCCGCCGCCGAGGAATTTCAAATCGAGAAACTACA 240
consensus_9516#2      ------------------------------------------------------------
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      GCTGGTGGAAGCTGAAAAGAAGAGGATCAGGTTGGAATTTGAACGGAACGAGAAGCAAGG 300
consensus_9516#2      ------------------------------------------------------------
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      TGATATCAAGAAGAAAATTGAATACTCAAAGCAGCTCAATGCTTCCCGACTTGAAGTTCT 360
consensus_9516#2      ------------------------------------------------------------
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      GCAAGCTCAAGATGATTTAGCGATGTCTATGTTGGAGGCAGCAGGGAAAGAGCTACTGTA 420
consensus_9516#2      ------------------------------------------------------------
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      CATAACCCGAGATCACCATGTATACAAGAATCTTCTTAGGATATTTATTGTTCAGAGCTT 480
consensus_9516#2      ------------------------------------------------------------
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      GCTGCGTTTGAAGGAGCCAGCTGTGATTCTGCGCTGCAGGAAGGAGGATCGTGAGCTTGT 540
consensus_9516#2      ------------------------------------------------------------
consensus_9516#1      ------------------------------AGGATGAGACAGGGGGGATCGTGAGCTTGT 30
                                                                                  

consensus_9516#0      TGAATCAGTTTTGGAGTCTGCAAAGAATGAATATGCAGACAAAGCAAATATATATCCTCC 600
consensus_9516#2      ------------------------------------------------------------
consensus_9516#1      TGAATN-GTTTTGGACTCTGCAAAGAATGAATATGCAGACAAAGCAAATATATATCCTCC 89
                                                                                  

consensus_9516#0      TGAAATAATGGTAGACCGTAATGTCTATCTGCCTCCTGCTCCCAGTCATTATGAGGCACA 660
consensus_9516#2      ------------------------------------------------------------
consensus_9516#1      TGAAATAATGGTAGACCGTAATGTCTATCTGCCTCCTGCTCCCAGTCATTATGAGGCACA 149
                                                                                  

consensus_9516#0      TGGACCCTCCTGCTCTGGTGGAGTTGTGCTAGCTTCCCGAGATGGAAAGATAGTCTGTGA 720
consensus_9516#2      ---ACCCNCCTGCTCTGGTGGAGTTGTGCTAGCTTCCCGAGATGGAAAGATAGTCTNTGA 57
consensus_9516#1      TGGACCCTCCTGCTCTGGTGGAGTTGTGCTAGCTTCCCGAGATGGAAAGATAGTCTGTGA 209
                         **** ************************************************ ***

consensus_9516#0      AAATACATTGGATGCTAGACTAGAGGTGGTTTTCAGAAAGAAGCTACCAGAGATTCGTCG 780
consensus_9516#2      AAATACATTGGATGCTAGACTAGAGGTGGTTTTCAGAAAGAAGCTNCCAGAGATTCGTCG 117
consensus_9516#1      AAATACATTGGATGCTAGACTAGAGGTGGTTTTCAGAAGGAAGCTACCAGAGATTCGTCG 269
                      ************************************** ****** **************

consensus_9516#0      AAGCCTTCTTGGGCAGGTAGCTGCTTGACCGATTCATAAATACAGGATGCTGCACAATAC 840
consensus_9516#2      AAGCCTTNTTGGGCAGGTAGCTGCTTGNCCGATTCATAAATACAGGATGCTGCACAATNC 177
consensus_9516#1      AAGCCTTCTTGGGCAGGTAGCTGCTTGACCGATTCATAAATACAGGATGCTGCACAATAC 329
                      ******* ******************* ****************************** *

consensus_9516#0      CGTTTTCTTCTGCATGATGGTGTCAAAGAAAGCATTTTGGCAGTTAAAATGATTTATCAC 900
consensus_9516#2      CGTTTTCTTCTGCATGATGGTGTCAAAGAAAGCATTTTGGCAGTTAAAATGATTTATCAC 237
consensus_9516#1      CGTTTTCTTCTGCATGATGGTGTCAAAGAAAGCATTTTGGCAGTTAAAATGATTTATCAC 389
                      ************************************************************

consensus_9516#0      TTTGCTCAAGTCTGTTACATATATATTTTTTATAGGGAGCCACTGTCATCAAACTACAGA 960
consensus_9516#2      TTTGCTCAAGTCTGTTACATATATATTTTTTATAGGGNGCCNCTGTCATCAAACTACAGN 297
consensus_9516#1      TTTGCTCAAGTCTGTTACATATAAATTTTT-ATAGGGAGCCACTGTCATCAAACTACAGA 448
                      *********************** ****** ****** *** ***************** 

consensus_9516#0      CCTTAGTATTGCCGATAGCGAATAAATTGATATGTTCATGTTGCTCACGATTTCTCATAA 1020
consensus_9516#2      CCTTAGTATTGCCGATAGCGAATAAATTGATATGTTCATGTTGCTCNCGATTTCTCATAA 357
consensus_9516#1      CCTTAGTATTGCCGATAGCGAATAAATTGATATGTTCATGTTGCTCACGATTTCTCATAA 508
                      ********************************************** *************

consensus_9516#0      TAAGGCCTAAGAGGTGTAGTTATCCCATTTATATGTTCATCTTTTCTCACAGAAGACAAT 1080
consensus_9516#2      TAAGGCCTAAGAGGTGTAGTTATCCCATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 417
consensus_9516#1      TAAGGCCTAAGAGGTGTAGTTATCCCATTTATATGTTCATCTTTTCTCACAGAAGACAAT 568
                      ******************************* *     *         * * ** * ** 

consensus_9516#0      CCATTGTCATTTATTCATCTGTTATTTGTTTTTGTTTTCATGGAAATAATATACCAAGGC 1140
consensus_9516#2      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------------------------ 447
consensus_9516#1      CCATTGTCATTTATTCATCTGTTATTTGNTTTTGGTTTCATGGAAATAATATACCAAGGC 628
                        *     *   *   *      *                                    

consensus_9516#0      CTC--------------------------------------------------------- 1143
consensus_9516#2      ------------------------------------------------------------
consensus_9516#1      CTCTCTTAGAATGAATAAATAGAAGATTTGGAAGTGCCCTGCAGTGCAAGATAAACTGAA 688
                                                                                  

consensus_9516#0      ------------------------------------------------------------
consensus_9516#2      ------------------------------------------------------------
consensus_9516#1      ATTCTACAGATGCATCATTGGNCTAGNTTTATCTGACATCCCTTTCTCTAAGAATTCCCC 748
                                                                                  

consensus_9516#0      ------------------------------------------------------------
consensus_9516#2      ------------------------------------------------------------
consensus_9516#1      AACCCAGGCTTTTGGCCGCTTGTACAGAGTTTAATGAAGTTGAACTGCACTGCTGGTTTC 808