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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9699#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2523 fasta sequence
[ACCGCTCTTCTCCAATCTCCACACAGATGTCACTGCAACCTCCTCTCTATCTCTCTCTCTCTCTCTCTTGGTTTTCCGCTAATTAACCGCAGGGAGCGTGAGAAATTAAGTGATTGATTGAGAGATAGTAGTGGGGGTGGAAAAAGGAGGCGCCTTTAGTGGAAAAAGCTGCTCCTTTTTTCGCTTCTTCCTCCGCTCCCATTTCAATTTCGTGCGTGTGGCTTTCTCCTCTCCGCGTTTTGGTTTCCCGCGCGCGGAGGAGGG-AAAGATTTTGCCGTGTTCTTGCCGGCG----GCGAGCCGCCATGGAGGCGGCCGAATCCTTGGAGTATGAGCTGCAGAAGGAGGTCTCCAACATCATGATCCAGAGCTACATTACTAGCATGCGTCGAGAGTTCGAGACAAAGTTATGGGAGAATCAGAACTGCATTAGTACCTTGAACAAAAACTGGAAGGAAAAGATATCTAAGATTGCCGCACTGCGAGATGAACTCAGTACTATTTACAGTGTTGTATCAGCTTCAGAATCTGGTGTGTTTTCTTCTCATGGTAGTCACGAAAAGGTCGAAGAGCTCAACTTTTTGAAGATGAAGGATGATAACGAGTCATCAATCACAGAGAGAACTACAGATTCAGGTGAGCTCATGTTTGATATCCCGGACTTCTCACTCTTAAAGCACATGCCAAGTGAAGAAGTCACAAATTTTCTAAAATCAGAATGGCTGAAGTTGCGAAGACAGCACGAGTCTGAATTGCATGAGAAAACAGAAGAGTTGTTTAGGCTAAAAAGGGAATTTGCGAAAGATATAGCTTTGTTGCCTTCTAGGAAAGAGAGAGAACTTGAAATCATCAAATCAAAGTTGCTTCAAAGCATTTCAAAATTGGATGAAATCACCTTGAGAGAAGATAACCCTTATTGTGATAATTATGATGGTGCCGAGGTTTGCGGATTTGAGGACAGAATCGGCTCTTTACTTCATGAAAATGAACAACTACAAGGTTTGCTAGCTGACAAAAAAATGGTGGCTAAACATCTGTCTTTACAAGTATTAGATGCAGAGAGGAAAATGGCACAGCACTCGTTGTCCGAGTTAAAACTTGTGAAACAAGTTGAGAAGCTTAGCCATGAACTTGAAGATTTAAAGATTGAGAGCCACATTAAAGATTTATTGGAGCTGTCGACATTAAGAGAAGTTTTTGATAATTATGAGAATCATATTGATGATGCTAATCAGGAGGAGACCTTCCTCAGAGAGTTGCTTATAGAAAAAGAAGAGCAGTTGAGTATTATGTATGAAGACAGACAGAAGCTAAAGTATGAAAACAATCAACTTGTAGCAATTGCAGGATCAACATTAATGCAGCACCATGAGCAAGTCAACTTGGTTAATGACCTTACCAATTTTAGGGAGAAGGTGTGCGAGCAAGAGTTGTTGATCTTAGAGTCCAAGAGTGAGTCTAATTCAATGAAGAGTAGCTTGTATGAGGCTTTGCAGCAAATTAATGTATGCAAGCAAGAGATACATGGTCTGACTGACAACTTAACTGCCATGTCTATTGCTTTGGAGGAAGCCAAAGAACAGAATGCCTCACTTGATGCCACCATCCAGGAAATGAAGAAAACATCGGCGCCAAGCATTAACAGTCATAAGGGACAAGCAGGGCACCTAGAATATGCCCTTGTTAGTATGGAGAAGTTATCTAAATCATACAGCGATTTTGAAAGCAGATTGGCTCAAAGTATGAAGAGAAATGAAATTAGGTTGACTAATATAATTTGCCAGTTTAACCCACTGGTGCAGCAAGTTGCTGTATTAAAGAAAAAAGAATTCTGGTATAAACAGATACTCGAGATTAAATGCTCTAATCTCCAGAAAGCAGAAGCTGAGGTTGATATACTTGGGGATGAAGTTGATGCTCTTCTTAGTATTCTTGGGAAGATCTACATAGCACTTGATCATTATTCTCCTGTATTGAAGCATTATCCTGGGGTTACAGAGATTTTGAATCTGGTTCAGAAAGCATTGAAAGGAGAAAGTATTTAGTAGGATCAGGAAAAACCTTAACACTATTCATGAAAAGGCTTGACATGGATAGAATTATGACTGAGATTTTTCAATACTTCAGTTACCTGATTGCCGTAGGCA-AATTTTTTTTGCATTGTCTCACAGGGAAGAAAGATTAAGATCTTAACACACAAAGGCAAAGCATAGTAAACTAGCTAGCTACCATTGTTCCATTGATAGGGTTACCAACCGCATCTGTTGATTTATATGATTGTATCAGTGTTCAGTTAGTGGTGTTGTGAGTACAGTAGTACAGGCTTATAGGGTCTATTTGTATTGGTTGTAGTTTCAGGTTTCACTGTGAGTAGTTTACTTGTCTGCATGCAACAAAGTGCAGCTTGCTATAGTTATAGATGGTTTTGTCAGTGATCTTTTTTAGATGGCTTTGTAAAGATTCTTTGTGGAATGGAAGGCAGTAGGTAGGAGTTGTAATATCAGGTGGCTAATTAATGAAATCTGTG]
[+] EMBL CB635011 [ACCGCTCTTCTCCAATCTCCACACAGATGTCACTGCAACCTCCTCTCTATCTCTCTCTCTCTCTCTCTTGGTTTTCCGCTAATTAACCGCAGGGAGCGTGAGAAATTAAGTGATTGATTGAGAGATAGTAGTGGGGGTGGAAAAAGGAGGCGCCTTTAGTGGAAAAAGCTGCTCCTTTTTTCGCTTCTTCCTCCGCTCCCATTTCAATTTCGTGCGTGTGGCTTTCTCCTCTCCGCGTTTTGGTTTCCCGCGCGCGGAGGAGGG AAAGATTTTGCCGTGTTCTTGCCGGCG GCGAGCCGCCATGGAGGCGGCCGAATCCTTGGAGTATGAGCTGCAGAAGGAGGTCTCCAACATCATGATCCAGAGCTACATTACTAGCATGCGTCGAGAGTTCGAGACAAAGTTATGGGAGAATCAGAACTGCATTAGTACCTTGAACAAAAACTGGAAGGAAAAGATATCTAAGATTGCCGCACTGCGAGATGAACTCAGTACTATTTACAGTGTTGTATCAGCTTCAGAATCTGGTGTGTTTTCTTCTCATGGTAGTCACGAAAAGGTCGAAGAGCTCAACTTTTTGAAGATGAAGGATGATAACGAGTCATCAATCACAGAGAGAACTACAGATTCAGATGAGCTCATGTTTGATATCCCGGACTTCTCACTCTTAAAGCACATGCCAAGTGAAGAAGTCACAAAATTTCTAAAATCAGAATGGCTGAAGTTGCGAAGACAGCACGAGTCTGAATTGCATGAGATAACAGAGGAGTTGTT ]
[+] EMBL AK070162 [ TGGAAAAAGCTGCTCCTTTTTTCGCTTCTTCCTCCGCTCCCATTTCAATTTCGTGCGTGTGGCTTTCTCCTCTCCGCGTTTTGGTTTCCCGCGCGCGGAGGAGGG AAAGATTTTGCCGTGTTCTTGCCGGCG GCGAGCCGCCATGGAGGCGGCCGAATCCTTGGAGTATGAGCTGCAGAAGGAGGTCTCCAACATCATGATCCAGAGCTACATTACTAGCATGCGTCGAGAGTTCGAGACAAAGTTATGGGAGAATCAGAACTGCATTAGTACCTTGAACAAAAACTGGAAGGAAAAGATATCTAAGATTGCCGCACTGCGAGATGAACTCAGTACTATTTACAGTGTTGTATCAGCTTCAGAATCTGGTGTGTTTTCTTCTCATGGTAGTCACGAAAAGGTCGAAGAGCTCAACTTTTTGAAGATGAAGGATGATAACGAGTCATCAATCACAGAGAGAACTACAGATTCAGGTGAGCTCATGTTTGATATCCCGGACTTCTCACTCTTAAAGCACATGCCAAGTGAAGAAGTCACAAATTTTCTAAAATCAGAATGGCTGAAGTTGCGAAGACAGCACGAGTCTGAATTGCATGAGAAAACAGAAGAGTTGTTTAGGCTAAAAAGGGAATTTGCGAAAGATATAGCTTTGTTGCCTTCTAGGAAAGAGAGAGAACTTGAAATCATCAAATCAAAGTTGCTTCAAAGCATTTCAAAATTGGATGAAATCACCTTGAGAGAAGATAACCCTTATTGTGATAATTATGATGGTGCCGAGGTTTGCGGATTTGAGGACAGAATCGGCTCTTTACTTCATGAAAATGAACAACTACAAGGTTTGCTAGCTGACAAAAAAATGGTGGCTAAACATCTGTCTTTACAAGTATTAGATGCAGAGAGGAAAATGGCACAGCACTCGTTGTCCGAGTTAAAACTTGTGAAACAAGTTGAGAAGCTTAGCCATGAACTTGAAGATTTAAAGATTGAGAGCCACATTAAAGATTTATTGGAGCTGTCGACATTAAGAGAAGTTTTTGATAATTATGAGAATCATATTGATGATGCTAATCAGGAGGAGACCTTCCTCAGAGAGTTGCTTATAGAAAAAGAAGAGCAGTTGAGTATTATGTATGAAGACAGACAGAAGCTAAAGTATGAAAACAATCAACTTGTAGCAATTGCAGGATCAACATTAATGCAGCACCATGAGCAAGTCAACTTGGTTAATGACCTTACCAATTTTAGGGAGAAGGTGTGCGAGCAAGAGTTGTTGATCTTAGAGTCCAAGAGTGAGTCTAATTCAATGAAGAGTAGCTTGTATGAGGCTTTGCAGCAAATTAATGTATGCAAGCAAGAGATACATGGTCTGACTGACAACTTAACTGCCATGTCTATTGCTTTGGAGGAAGCCAAAGAACAGAATGCCTCACTTGATGCCACCATCCAGGAAATGAAGAAAACATCGGCGCCAAGCATTAACAGTCATAAGGGACAAGCAGGGCACCTAGAATATGCCCTTGTTAGTATGGAGAAGTTATCTAAATCATACAGCGATTTTGAAAGCAGATTGGCTCAAAGTATGAAGAGAAATGAAATTAGGTTGACTAATATAATTTGCCAGTTTAACCCACTGGTGCAGCAAGTTGCTGTATTAAAGAAAAAAGAATTCTGGTATAAACAGATACTCGAGATTAAATGCTCTAATCTCCAGAAAGCAGAAGCTGAGGTTGATATACTTGGGGATGAAGTTGATGCTCTTCTTAGTATTCTTGGGAAGATCTACATAGCACTTGATCATTATTCTCCTGTATTGAAGCATTATCCTGGGGTTACAGAGATTTTGAATCTGGTTCAGAAAGCATTGAAAGGAGAAAGTATTTAGTAGGATCAGGAAAAACCTTAACACTATTCATGAAAAGGCTTGACATGGATAGAATTATGACTGAGATTTTTCAATACTTCAGTTACCTGATTGCCGTAGGCA AATTTTTTTTGCATTGTCTCACAGGGAAGAAAGATTAAGATCTTAACACACAAAGGCAAAGCATAGTAAACTAGCTAGCTACCATTGTTCCATTGATAGGGTTACCAACCGCATCTGTTGATTTATATGATTGTATCAGTGTTCAGTTAGTGGTGTTGTGAGTACAGTAGTACAGGCTTATAGGGTCTATTTGTATTGGTTGTAGTTTCAGGTTTCACTGTGAGTAGTTTACTTGTCTGCATGCAACAAAGTGCAGCTTGCTATAGTTATAGATGGTTTTGTCAGTGATCTTTTTTAGATGGCTTTGTAAAGATTCTTTGTGGAATGGAAGGCAGTAGGTAGGAGTTGTAATATCAGGTGGCTAATTAATGAAATCTGTG]
[+] EMBL BF475219 [ CTCCCATTTCAATTTCGTGCGTGTGGCTTTCTCCTCTCCGCGTTTTGGTTTCCCGCGCGCGGAGAAGGGAAAAGATTTTGCCGTGTTCTTGCCGGCGGCGAGCGAGCCGCCATGGAGGCGGCCGAATCCTTGGAGTATGAGCTGCAGAAGGAGGTCTCCAACATCATGATCCAGAGCTACATTACTAGCATGCGTCGAGAGTTCGAGACAAAGTTATGGGAGAATCAGAA ]
[+] EMBL BF475217 [ AGTGTTGTATCAGCTTCAGAATCTGGTGTGTTTTCTTCTCATGGTAGTCACGAAAAGGTCGAAGAGCTCAACTTTTTGAAGATGAAGGATGATAACGAGTCATCAATCACAGAGAGAATTACAGATTCAGGTGAGCTCATGCTTGATATCCCGGACTTCTCACTCTTAAAGCACATGCCAAGTGAAGAAGTCACAAATTTTCTAAAATCAGAATGGCTGAAGTTGCGAAGACAGCATGAATCTGAATTGCATGAGAAAACAGAAGAGTTGTTTAGGCTAAAAAGGGAATTTGCGAAAGATATAGCTTTGTTGCCTTCTAGGAAAGAGAGAGAACTTGAAATCATCAAATCAAAGTTGCCTCAAAGCATTTCAAAATTGGATGAAATCACCTCGAGAGAAGATAACCCTTATTGTGATAATTATGATGATGCCGAGGTTTGCGGATTTGAGGACAGAATCGGCTCTTTACTTCATGAAAATGAACAACTACAAGGTTTGCTAGCTGACAAAAAAATGGTGGCTAAACATCTGTCTTTACAAGTATTAGATGCAGAGAGGAAAATGGCACAGCACTCGTTGTCCGAGTTAAAACTTGTGAAACAAATTGAGAAGCTTA CCATGAACTTGAAGA ]
[-] EMBL CB635012 [ AGATTGGCTCAAAGTATGAAGAGAAATGAAATTAGGTTGACTAATATAATTTGCCAGTTTAACCCACTGGTGCAGCAAGTTGCTGTATTAAAGAAAAAAGAATTCTGGTATAAACAGATACTCGAGATTAAATGCTCTAATCTCCAGAAAGCAGAAGCTGAGGTTGATATACTTGGGGATGAAGTTGATGCTCTTCTTAGTATTCTTGGGAAGATCTACATAGCACTTGATCATTATTCTCCTGTATTGAAGCATTATCCTGGGGTTACAGAGATTTTGAATCTGGTTCAGAAAGCATTGAAAGGAGAAAGTATTTAGTAGGATCAGGAAAAACCTTAACACTATTCATGAAAAGGCTTGACATGGATAGAATTATGACTGAGATTTTTCAATACTTCAGTTACCTGATTGCCGTAGGCA AATTTTTTTTGCATTGTCTCACAGGGAAGAAAGATTAAGATGTTAACACACAAAGGCAAAGCATAGTAAACTAGCTAGCTACCATTGTTCCATTGATAGGGTTACCAACCGCATCTGTTGATTTATATGATTGTATCAGTGTTCAGTTAGTGGTGTTGTGAGTACAGTAGTACAGGCTTATAGGGTCTATTTGTATTGGTTGTAGTTTCAGGTTTCACTGTGAGTAGTTTACTTGTCTGCATGCAACAAAGTGCAGCTTGGTATAGTTATAGATGGTTTTGTCAGTGATCTTTTTTAGATGGCTTTGTAAAGATTCTTTGTGGAATTGAAAGGAGTAGGTAGGAGT ]
[+] EMBL CB680748 [ CGGAGGCATTATTTTTTTTGCATTGTCTCACAGGGAAGAAAGATTAAGATCTTAACACACAAAGGCAAAGCATAGTAAACTAGCTAGCTACCATTGTTCCATTGATAGGGTTACCAACCGCATCTGTTGATTTATATGATTGTATCAGTGTTCAGTTAGTGGTGTTGTGAGTACAGTAGTACAGGCTTATAAGGTCTATTTGTATTGGTTGTAGTTTCAGGTTTCACTGTGAGTAGTTTACTTGGCTGCATGCAACAAAGTGCAGCTTGCTATAGTTATAGATGGTTTTGTCAGTGATCTTTTTTAGATGGCTTTGTAAAGATTCTTTGTGGAATGGAAGGCAGTAGGTAGGAGTTGTAATATCAGGTGGCTAATTAATGAAATCTGTG]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||