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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9700#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1301 fasta sequence
[CAATTGAAATTGATGTTGATGCATTGGCTGACTCAGTTGGTAATGTTGTGATTGGTGGAATTATGGAGCATATTGAGCAGGCTGGTATCCATTCTGGTGATTCTGCCTGTTCCCTTCCCACTAGAACAGTCTCTGCAAAGTGTTTAGATATAATCCGTTCATGGACCACAAAGCTGGCAAAGCGTCTCAACGTCTGTGGGCTCATGAACTGCCAGTATGCTATTACTACTTCTGGTGAGGTATTCCTTCTTGAAGCAAATCCCCGGGCCTCACGCACTGTCCCTTTTGTCTCGAAAGCAATTGGACATCCATTGGCAAAATATGCATCTCTGGTCATGTCTGGTGTGACCTTGCCAGAGCTTGGGTACACTCAGGAAGTTGTTCCTAAGCATGTTTCTGTCAAGGAGGCAGTTCTTCCATTTGAGAAATTCCAGGGCTGCGACATTCTTCTGGGACCAGAGATGCGCAGCACCGGAGAGGTGATGGGCATTGACTATGAGTTTTCTGGTGCATTCGCAAAGGCTCAGATTGCCGCTGGACAGAAGCTCCCATTAAATGGAACTGTCTTCCTTAGTCTAAATGACCTGACGAAACGCCACCTTGCTGAAATCGGACGAGGGTTCAGGGAACTTGGGTTCAACATCATTGCCACATCTGGAACAGCCAAAGTACTTCAGCTGGAGGGCATCCCAGTGGAGCCAGTTCTGAAAATACATGAGGGGCGGCCAAATGCCAGGGACATGCTTAAGAATGGTCAGATACAGGTGATGGTGATAACTAGCTCAGGTGATGCTCTTGACTCCAAAGATGGCCTCCAGCTCCGCAGATTGGCCCTGGCCTACAAGGTCCCGATAATTACTACCGTGGATGGGGCGCGTGCTACCATCGATGCTATCAAAAGCTTGAAGAACAAATCAATTGAGACTCTCGCGTTGCAAGATTACTTCCAGACTACAGATGCATCCCAGAACTTGCAAGCAGCGCAAAGTGCCTCTTAGGGTCATGCCCTTCTATTGTCATTTTTCTAATGCTATT-GTAGTATCAACTATAGACTTCTGTTCTGTAGGATTTTGTTTACCTTCTGCATGCGCAAGCATAAACATGTTGACTGCAAGTACTAGTCTCAAACCTTGTCTTGCGCATTATTATTTACTGTGTAACAGTGGGGGTCAACATCCACAGAATAAGGCCCCCAGGTTGCATCTTATGAAACCATTCCTCTCTGGAGCGCTTGTACTTGTATCCCTGTGGCACAAATTTGTGCTGACTTATTATATTGTATGCTACTCCAGATTCTATGA]
[+] EMBL CF197074 [CAATTGAAATTGATGTTGATGCATTGGCTGACTCAGTTGGTAATGTTGTGATTGGTGGAATTATGGAGCATATTGAGCAGGCTGGTATCCATTCTGGTGATTCTGCCTGTTCCCTTCCCACTAGAACAGTCTCTGCAAAGTGTTTAGATATAATCCGTTCATGGACCACAAAGCTGGCAAAGCGTCTCAACGTCTGTGGGCTCATGAACTGCCAGTATGCTATTACTACTTCTGGTGAGGTATTCCTTCTTGAAGCAAATCCCCGGGCCTCACGCACTGTCCCTTTTGTCTCGAAAGCAATTGGACATCCATTGGCAAAATATGCATCTCTGGTCATGTCTGGTGTGACCTTGCCAGAGCTTGGGTACACTCAGGAAGTTGTTCCTAAGCATGTTTCTGTCAANNNNNCAGTTCTTCCATTTGNNNNNTTCCAGGGCTGCGNCAT ]
[+] EMBL AK061023 [ GGCTGACTCAGTTGGTAATGTTGTGATTGGTGGAATTATGGAGCATATTGAGCAGGCTGGTATCCATTCTGGTGATTCTGCCTGTTCCCTTCCCACTAGAACAGTCTCTGCAAAGTGTTTAGATATAATCCGTTCATGGACCACAAAGCTGGCAAAGCGTCTCAACGTCTGTGGGCTCATGAACTGCCAGTATGCTATTACTACTTCTGGTGAGGTATTCCTTCTTGAGGCAAATCCCCGAGCCTCACGCACTGTCCCTTTTGTCTCGAAAGCAATTGGACATCCATTGGCAAAATATGCATCTCTGGTCATGTCTGGTGTGACCTTGCCAGAGCTTGGGTACACTCAGGAAGTTGTTCCTAAGCATGTTTCTGTCAAGGAGGCAGTTCTTCCATTTGAGAAATTCCAGGGCTGCGACATTCTTCTGGGACCAGAGATGCGCAGCACCGGAGAGGTGATGGGCATTGACTATGAGTTTTCTGGTGCATTCGCAAAGGCTCAGATTGCCGCTGGACAGAAGCTCCCATTAAATGGAACTGTCTTCCTTAGTCTAAATGACCTGACGAAACGCCACCTTGCTGAAATCGGACGAGGGTTCAGGGAACTTGGGTTCAACATCATTGCCACATCTGGAACAGCCAAAGTACTTCAGCTGGAGGGCATCCCAGTGGAGCCAGTTCTGAAAATACATGAGGGGCGGCCAAATGCCAGGGACATGCTTAAGAATGGTCAGATACAGGTGATGGTGATAACTAGCTCAGGTGATGCTCTTGACTCCAAAGATGGCCTCCAGCTCCGCAGATTGGCCCTGGCCTACAAGGTCCCGATAATTACTACCGTGGATGGGGCGCGTGCTACCATCGATGCTATCAAAAGCTTGAAGAACAAATCAATTGAGACTCTCGCATTGCAAGATTACTTCCAGACTACAGATGCATCCCAGAACTTGCAAGCAGCGCAAAGTGCCTCTTAGGGTCATGCCCTTCTATTGTCATTTTTCTAATGCTATT GTAGTATCAACTATAGACTTCTGTTCTGTAGGATTTTGTTTACCTTCTGCATGCGCAAGCATAAACA ]
[+] EMBL CB663015 [ TCCTAAGCATGTTTCTGTCAAGGAGGCAGTTCTTCCATTTGAGAAATTCCAGGGCTGCGACATTCTTCTGGGACCAGAGATGCGCAGCACCGGAGAGGTGATGGGCATTGACTATGAGTTTTCTGGTGCATTCGCAAAGGCTCAGATTGCCGCTGGACAGAAGCTCCCATTAAATGGAACTGTCTTCCTTAGTCTAAATGACCTGACGAAACGCCACCTTGCTGAAATCGGACGAGGGTTCAGGGAACTTGGGTTCAACATCATTGCCACATCTGGAACAGCCAAAGTACTTCAGCTGGAGGGCATCCCAGTGGAGCCAGTTCTGAAAATACATGAGGGGCGGCCAAATGCCAGGGACATGCTTAAGAATGGTCAGATACAGGTGATGGTGATAACTAGCTCAGGTGATGCTCTTGACTCCAAAGATGGCCTCCAGCTCCGCAGATTGGCCCTGGCCTACAAGGTCCCGATAATTACTACCGTGGATGGGGCGCGTGCTACCATCGATGCTATCAAAAGCTTGAAGAACAAATCAATTGAGACTCTCGCATTGCAAGATTACTTCCAGACTACAGATGCATCCCAGAACTTGCAAGCAGCGCAAAGTGCCTCTTAGGGTCATGCCCTTCTATTGTCATTTTTCTAATGCTATT GTAGTATCAACTATAGACTTCTGTTCTGTAGGATTTTGTTTACCTTCTGCATGCGCAAGCATAAACATGTTGACTGCAAGTACTAGTCTCAAACCTTGTCTTGCGCATTATTATTTACTGTGTAACAGTG ]
[-] EMBL CB627647 [ TTCCAGGGCTGCGACATTCTTCTGGGACCAGAGATGCGCAGCACCGGAGAGGTGATGGGCATTGACTATGAGTTTTCTGGTGCATTCGCAAAGGCTCAGATTGCCGCTGGACAGAAGCTCCCATTAAATGGAACTGTCTTCCTTAGTCTAAATGACCTGACGAAACGCCACCTTGCTGAAATCGGACGAGGGTTCAGGGAACTTGGGTTCAACATCATTGCCACATCTGGAACAGCCAAAGTACTTCAGCTGGAGGGCATCCCAGTGGAGCCAGTTCTGAAAATACATGAGGGGCGGCCAAATGCCAGGGACATGCTTAAGAATGGTCAGATACAGGTGATGGTGATAACTAGCTCAGGTGATGCTCTTGACTCCAAAGATGGCCTCCAGCTCCGCAGATTGGCCCTGGCCTACAAGGTCCCGATAATTACTACCGTGGATGGGGCGCGTGCTACCATCGATGCTATCAAAAGCTTGAAGAACAAATCAATTGAGACTCTCGCGTTGCAAGATTACTTCCAGACTACAGATGCATCCCAGAACTTGCAAGCAGCGCAAAGTGCCTCTTAGGGTCATGCCCTTCTATTGTCATTTTTCTAATGCTATT GTAGTATCAACTATAGACTTCTGTTCTGTAGGATTTTGTTTACCTTCTGCATGCGCAAGCATAAACATGTTGACTGCAAGTACTAGTCTCAAACCTTGTCTTGCGCATTATTATTTACTGTGTAACAGTGGGGGTCAACATCCACAGAATAAGGCCCCCAGGTTGCATCTTATGAAACCATTCCTCTCTGGAGCG ]
[+] EMBL BI118652 [ GGAGGGCATCCCAGTGGAGCCAGTTCTGAAAATACATGAGGGGCGGCCAAATGCCAGGGACATGCTTAAGAATGGTCAGATACAGGTGATGGTGATAACTAGCTCAGGTGATGCTCTTGACTCCAAAGATGGCCTCCAGCTCCGCAGATTGGCCCTGGCCTACAAGGTCCCGATAATTACTACCGTGGATGGGGCGCGTGCTACCATCGATGCTATCAAAAGCTTGAAGAACAAATCAATTGAGACTCTCGCGTTGCAAGATTACTTACAGACTACAGATGCATCCCAGAACTTGCAAGCAGCGCAAAGTGCCTCTTAGGGTCATGCCCTTCTATTG CATTTTTCTAATGCTATTGGAAGTATCAACTATAGACTTCTGTTCTGTAGGATTTTGTTTACCTTCTGCATGCGCAAGCATAAACATGTT ]
[+] EMBL CA764673 [ CCAGCTCCGCAGATTGGCCCTGGCCTACAAGGTCCCGATAATTACTACCGTGGATGGGGCGCGTGCTACCATCGATGCTATCAAAAGCTTGAAGAACAAATCAATTGAGACTCTCGCGTTGCAAGATTACTTCCAGACTACAGATGCATCCCAGAACTTGCAAGCAGCGCAAAGTGCCTCTTAGGGTCATGCCCTTCTATTGTCATTTTTCTAATGCTATT GTAGTATCAACTATAGACTTCTGTTCTGTAGGATTTTGTTTACCTTCTGCATGCGCAAGCATAAACATGTTGACTGCAAGTACTAGTCTCAAACCTTGTCTTGCGCATTATTATTTACTGTGTAACAGTGGGGGTCAACATCCACAGAATAAGGCCCCCA ATTGCATCTTATGAAACCATTCCTCTCTGGAGCGCTTGTACTTGTATCCCTGTGGCACAAATTTGTGCTGACTTATTATATTGTATGCTACTCCAGATTCTATGA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||