cluster # 9784

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Oryza sativa
cluster # 9784 cluster # 9784 Sequences # 6 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9784#0 length = 1862 sequences # 4

consensus_9784#1 length = 846 sequences # 1
consensus_9784#2 length = 414 sequences # 1

consensusID : consensus_9784#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1862
fasta sequence

                              [CCGCTGTCCGCCTGCCTGCCTACTTTCTCCACTTTTTTCTCCTCCTCCTCCTCTTCTTCTTCCTTCGTTTCGCCTCCTCTACTCTTCTAAGTTCCAACTTCCAACTAGCTCGACTCAAGTGAAGAGTCCGCCGCCTTTCCCTCCTCGCCGCCGCTCGGATGGGGATGGCCCCCGCCGGTCGCCTCCTCCTCATCTCCTGCCTCCTCTGTGTGCCCAATTCATTTGGATTTGCATTTGCTGTGGAGGAGGAGGAGGACGGCAGCGGGCTGATGCCACAGCTCTCACCCACCGGCTCTCCCAACCCCTTGGTTCCCTTCCTCGCGCCCGCCCCTCTCGCGCCATTCTTCAACACCACCCCTCCTAACTTGTCAGGCAAGTGCTCATTGAATTTTACTGCTGTCGGTGACCTCATCACCACCACTGCTGTCGACTGCTTTGCGTCCTTCGCCCCGTTCCTCGCCAATGTCATCTGCTGCCCCCAGCTCCAGGCCATGCTCACCATCCTCATTGGGCAGTCCAGCAAGCAGACTGGCTCCCTTGCTTTGGATCCCACCGTCGCTACCTACTGCCTCTCCGATGTTCAGCAGCTATTGTTGAGCCAGGGCGCTAGTGATGAGCTCCACAACATTTGCTCCCTTCACCTCTCCAATGTCACCGAGGGATCATGCCCCGTTAGCACCGTCGATGCCTTTGAAGCTGTCATCGACTCCTCAAAGCTCCTCGAGGCCTGTCACAAGATTGATCCTGTCAACGAGTGCTGCAGCCGCACCTGCCAGAATGCTATCAACGATGCCTCCCAGAAGATCTCTTTCAAAGACGGCGGTTTGACAAGCTACGCTGGTAGCCCCAAAGTTGATAGCTGCAGGAATGTCGTGCTCAGATGGCTATCCAGTAGGCTTGGCCCATCATCTGCAAAGCAAATGCTCAGGCAGATATCTAACTGCAATGTCAATGGAGTTTGTCCACTAAGCTTTCCAGACACGAGTAAAGTGGCAAAAGAGTGCAGTGGAACTGTCAAGAATGGTACTTCATGTTGCAAGGCTATGGACAGTTATGTATCTCACTTGCAAAAGCAAAGCTTCATAACAAATTTGCAAGCTTTAGATTGTGCCCAATTCCTTGGTGACAAGTTGCAAAAGATGAATGTCAGTATGAATGTTTATAGCTCATGTCAGATAACTCTCAAGGACTTTTCTCTTCAAGTTGGATCTCAAGAATCTGGATGCCTTCTTCCAAGTATGCCCTCGGATGCATCTTTTGACCCAGCTACTGGGATTAGTTTCACATGCGATCTGAATGATAATATTGCTGCCCCATGGCCATCTTCTATGCAAGCATCGTCTTCTTCATGCAATAAATCTGTTAATATTCCAGAGAGACCTGCTGCGACATCGGCACAAAATGGTGTCAACCAGAACAGACTGGAGCTTAGCCTACTTATTTATCTGGGCACCCTTGTTGTTGCTATTTGGCTACAAGTCTAGTCCAGTTAGCGAATTATTAATTTCAGATTCAGGAGAGCTGATTGGAATTGTCAACTGCGGAGT-TTTTGT-GC-TTGATGATCAC-ATCAAAGTG-TTG-TAGGTTACATGTGCT-TT-TT-AGTTCCTGATAGCTGTTAGTGTAAT-TTCTTGTAAGCCATATAATAGTAGT-AATAATTTATTATGCCTTTGTATAGAGAGAAAGAAGGGAAAAAAATTAAAGGGTGTGAAATGCGCAGGACAAT-TTAGCAAGACCACTGTTGTCTGATGGGAGTACATCATATTGGGATGGAC-TACACTCCATTATTGTTTAGAATTTATATTATTCAA-TTGTTCATTTTCTGATGTATGAATTAATCATGACAGAGAATCATATAATCTCATCTG]

[+] EMBL AK101907             [CCGCTGTCCGCCTGCCTGCCTACTTTCTCCACTTTTTTCTCCTCCTCCTCCTCTTCTTCTTCCTTCGTTTCGCCTCCTCTACTCTTCTAAGTTCCAACTTCCAACTAGCTCGACTCAAGTGAAGAGTCCGCCGCCTTTCCCTCCTCGCCGCCGCTCGGATGGGGATGGCCCCCGCCGGTCGCCTCCTCCTCATCTCCTGCCTCCTCTGTGTGCCCAATTCATTTGGATTTGCATTTGCTGTGGAGGAGGAGGAGGACGGCAGCGGGCTGATGCCACAGCTCTCACCCACCGGCTCTCCCAACCCCTTGGTTCCCTTCCTCGCGCCCGCCCCTCTCGCGCCATTCTTCAACACCACCCCTCCTAACTTGTCAGGCAAGTGCTCATTGAATTTTACTGCTGTCGGTGACCTCATCACCACCACTGCTGTCGACTGCTTTGCGTCCTTCGCCCCGTTCCTCGCCAATGTCATCTGCTGCCCCCAGCTCCAGGCCATGCTCACCATCCTCATTGGGCAGTCCAGCAAGCAGACTGGCTCCCTTGCTTTGGATCCCACCGTCGCTACCTACTGCCTCTCCGATGTTCAGCAGCTATTGTTGAGCCAGGGCGCTAGTGATGAGCTCCACAACATTTGCTCCCTTCACCTCTCCAATGTCACCGAGGGATCATGCCCCGTTAGCACCGTCGATGCCTTTGAAGCTGTCATCGACTCCTCAAAGCTCCTCGAGGCCTGTCACAAGATTGATCCTGTCAACGAGTGCTGCAGCCGCACCTGCCAGAATGCTATCAACGATGCCTCCCAGAAGATCTCTTTCAAAGACGGCGGTTTGACAAGCTACGCTGGTAGCCCCAAAGTTGATAGCTGCAGGAATGTCGTGCTCAGATGGCTATCCAGTAGGCTTGGCCCATCATCTGCAAAGCAAATGCTCAGGCAGATATCTAACTGCAATGTCAATGGAGTTTGTCCACTAAGCTTTCCAGACACGAGTAAAGTGGCAAAAGAGTGCAGTGGAACTGTCAAGAATGGTACTTCATGTTGCAAGGCTATGGACAGTTATGTATCTCACTTGCAAAAGCAAAGCTTCATAACAAATTTGCAAGCTTTAGATTGTGCCCAATTCCTTGGTGACAAGTTGCAAAAGATGAATGTCAGTATGAATGTTTATAGCTCATGTCAGATAACTCTCAAGGACTTTTCTCTTCAAGTTGGATCTCAAGAATCTGGATGCCTTCTTCCAAGTATGCCCTCGGATGCATCTTTTGACCCAGCTACTGGGATTAGTTTCACATGCGATCTGAATGATAATATTGCTGCCCCATGGCCATCTTCTATGCAAGCATCGTCTTCTTCATGCAATAAATCTGTTAATATTCCAGAGAGACCTGCTGCGACATCGGCACAAAATGGTGTCAACCAGAACAGACTGGAGCTTAGCCTACTTATTTATCTGGGCACCCTTGTTGTTGCTATTTGGCTACAAGTCTAGTCCAGTTAGCGAATTATTAATTTCAGATTCAGGAGAGCTGATTGGAATTGTCAACTGCGGAGT TTTTGT GC TTGATGATCAC ATCAAAGTG TTG TAGGTTACATGTGCT TT TT AGTTCCTGATAGCTGTTAGTGTAAT TTCTTGTAAGCCATATAATAGTAGT AATAATTTATTATGCCTTTGTATAGAGAGAAAGAAGGGAAAAAAATTAAAGGGTGTGAAATGCGCAGGACAAT TTAGCAAGACCACTGTTGTCTGATGGGAGTACATCATATTGGGATGGAC TACACTCCATTATTGTTTAGAATTTATATTATTCAA TTGTTCATTTTCTGATGTATGAATTAATCATGACAGAGAATCATATA          ]
[+] EMBL CB620701             [                                                                                                                     AGTGAAGAGTCCGCCGCCTTTCCCTCCTCGCCGCCGCTCGGATGGGGATGGCCCCCGCCGGTCGCCTCCTCCTCATCTCCTGCCTCCTCTGTGTGCCCAATTCATTTGGATTTGCATTTGCTGTGGAGGAGGAGGAGGACGGCAGCGGGCTGATGCCACAGCTCTCACCCACCGGCTCTCCCAACCCCTTGGTTCCCTTCCTCGCGCCCGCCCCTCTCGCGCCATTCTTCAACACCACCCCTCCTAACTTGTCAGGCAAGTGCTCATTGAATTTTACTGCTGTCGGTGACCTCATCACCACCACTGCTGTCGACTGCTTTGCGTCCTTCGCCCCGTTCCTCGCCAATGTCATCTGCTGCCCCCAGCTCCAGGCCATGCTCACCATCCTCATTGGGCAGTCCAGCAAGCAGACTGGCTCCCTTGCTTTGGATCCCACCGTCGCTACCTACTGCCTCTCCGATGTTCAGCAGCTATTGTTGAGCCAGGGCGCTAGTGATGAGCTCCACAACATTTGCTCCCTTCACCTCTCCAATGTCACCGAGGGATCATGCCCCGTTAGCACCGTCGATGCCTTTGAAGCTGTCATCGACTCCTCAAAGCTCCTCGAGGCCTGTCACAAGATTGATCCTGTCAACGAGTGCTGCAGCCGCACCTGCCAGAATGCTATCAACGATGCCTCCCAGAAGATCTCTTTCAAAGACGGCGGTTTGACAAGCTACGCTGGTAGCCCCAAAGTTGATAGCTGCAGGAATGTCGTGCTCAGATGGCTATCCAGTAGGCTTGGCCCATCATCTGCANAGCAAATGCTCAGGCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB620702             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTCATAACAAATTTGCAAGCTTTAGATTGTGCCCAATTCCTTGGTGACAAGTTGCAAAAGATGAATGTCAGTATGAATGTTTATAGCTCATGTCAGATAACTCTCAAGGACTTTTCTCTTCAAGTTGGATCTCAAGAATCTGGATGCCTTCTTCCAAGTATGCCCTCGGATGCATCTTTTGACCCAGCTACTGGGATTAGTTTCACATGCGATTTGAATGATAATATTGCTGCCCCATGGCCATCTTCTATGCAAGCATCGTCTTCTTCATGCAATAAATCTGTTAATATTCCAGAGAGACCTGCTGCGACATCGGCACAAAATGGTGTCAACCAGAACAGACTGGAGCTTAGCCTACTTATTTATCTGGGCACCCTTGTTGTTGCTATTTGGCTACAAGTCTAGTCCAGTTAGCGAATTATTAATTTCAGATTCAGGAGAGCTGATTGGAATTGTCAACTGCGGAGT TTTTGT GC TTGATGATCAC ATCAAAGTG TTG TAGGTTACATGTGCT TT TT AGTTCCTGATAGCTGTTAGTGTAAT TTCTTGTAAGCCATATAATAGTAGT AATAATTTATTATGCCTTTGTATAGAGAGAAAGAAGGGAAAAAAATTAAAGGGTGTGAAATGCGCAGGACAAT TTAGCAAGACCACTGTTGTCTGATGGGAGTACATCATATTGGGATGGAC TACACTCCATTATTGTTTAGAATTTATATTATTCAA TTGTTCATTTTCTGATGTATGAATTAATCATGACAGAGAATCATATAATCTCATCTG]
[+] EMBL BI813672             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGGAGTCTTTTGTCGCTTTGATGATCACAATCAAAGTGTTTGTTAGATTACATGTGCTCTTGTTCAGTTCCTGATACCTGTTAGCGTAATGTTCTTGTAAGCCATATAATAGTAGTGAATAACTTATTATGCCTTTGTATAGAGAGAAAGAAGGGAAAAAAATTAAAGGGTGTGAAATGCGCAGGACAATCTTAGCAAGACCACTGTTGTCTGATGGGAGTACATCATATTGGGATGGACGTACACTCCATTATTGTTTAGAATTTATATTATTCAATTTGTTCAaaaaaaaaa                                         ]




>consensus_9784#0
CCGCTGTCCGCCTGCCTGCCTACTTTCTCCACTTTTTTCTCCTCCTCCTCCTCTTCTTCT
TCCTTCGTTTCGCCTCCTCTACTCTTCTAAGTTCCAACTTCCAACTAGCTCGACTCAAGT
GAAGAGTCCGCCGCCTTTCCCTCCTCGCCGCCGCTCGGATGGGGATGGCCCCCGCCGGTC
GCCTCCTCCTCATCTCCTGCCTCCTCTGTGTGCCCAATTCATTTGGATTTGCATTTGCTG
TGGAGGAGGAGGAGGACGGCAGCGGGCTGATGCCACAGCTCTCACCCACCGGCTCTCCCA
ACCCCTTGGTTCCCTTCCTCGCGCCCGCCCCTCTCGCGCCATTCTTCAACACCACCCCTC
CTAACTTGTCAGGCAAGTGCTCATTGAATTTTACTGCTGTCGGTGACCTCATCACCACCA
CTGCTGTCGACTGCTTTGCGTCCTTCGCCCCGTTCCTCGCCAATGTCATCTGCTGCCCCC
AGCTCCAGGCCATGCTCACCATCCTCATTGGGCAGTCCAGCAAGCAGACTGGCTCCCTTG
CTTTGGATCCCACCGTCGCTACCTACTGCCTCTCCGATGTTCAGCAGCTATTGTTGAGCC
AGGGCGCTAGTGATGAGCTCCACAACATTTGCTCCCTTCACCTCTCCAATGTCACCGAGG
GATCATGCCCCGTTAGCACCGTCGATGCCTTTGAAGCTGTCATCGACTCCTCAAAGCTCC
TCGAGGCCTGTCACAAGATTGATCCTGTCAACGAGTGCTGCAGCCGCACCTGCCAGAATG
CTATCAACGATGCCTCCCAGAAGATCTCTTTCAAAGACGGCGGTTTGACAAGCTACGCTG
GTAGCCCCAAAGTTGATAGCTGCAGGAATGTCGTGCTCAGATGGCTATCCAGTAGGCTTG
GCCCATCATCTGCAAAGCAAATGCTCAGGCAGATATCTAACTGCAATGTCAATGGAGTTT
GTCCACTAAGCTTTCCAGACACGAGTAAAGTGGCAAAAGAGTGCAGTGGAACTGTCAAGA
ATGGTACTTCATGTTGCAAGGCTATGGACAGTTATGTATCTCACTTGCAAAAGCAAAGCT
TCATAACAAATTTGCAAGCTTTAGATTGTGCCCAATTCCTTGGTGACAAGTTGCAAAAGA
TGAATGTCAGTATGAATGTTTATAGCTCATGTCAGATAACTCTCAAGGACTTTTCTCTTC
AAGTTGGATCTCAAGAATCTGGATGCCTTCTTCCAAGTATGCCCTCGGATGCATCTTTTG
ACCCAGCTACTGGGATTAGTTTCACATGCGATCTGAATGATAATATTGCTGCCCCATGGC
CATCTTCTATGCAAGCATCGTCTTCTTCATGCAATAAATCTGTTAATATTCCAGAGAGAC
CTGCTGCGACATCGGCACAAAATGGTGTCAACCAGAACAGACTGGAGCTTAGCCTACTTA
TTTATCTGGGCACCCTTGTTGTTGCTATTTGGCTACAAGTCTAGTCCAGTTAGCGAATTA
TTAATTTCAGATTCAGGAGAGCTGATTGGAATTGTCAACTGCGGAGTTTTTGTGCTTGAT
GATCACATCAAAGTGTTGTAGGTTACATGTGCTTTTTAGTTCCTGATAGCTGTTAGTGTA
ATTTCTTGTAAGCCATATAATAGTAGTAATAATTTATTATGCCTTTGTATAGAGAGAAAG
AAGGGAAAAAAATTAAAGGGTGTGAAATGCGCAGGACAATTTAGCAAGACCACTGTTGTC
TGATGGGAGTACATCATATTGGGATGGACTACACTCCATTATTGTTTAGAATTTATATTA
TTCAATTGTTCATTTTCTGATGTATGAATTAATCATGACAGAGAATCATATAATCTCATC
TG

consensusID : consensus_9784#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 846
fasta sequence

                              [AGTACAAGGGGGCTATCAACGATGCCTCCCAGAAGATCTCTTTCAAAGACGGCGGTTTGACAAGCTACGCTGGTAGCCCCAAAGTTGATAGCTGCAGGAATGTCGTGCTCAGATGGCTATCCAGTAGGCTTGGCCCATCATCTGCAAAGCAAATGCTCAGGCAGATATCTAACTGCAATGTCAATGGAGTTTGTCCACTAAGCTTTCCAGACACGAGTAAAGTGGCAAAAGAGTGCAGTGGAACTGTCAAGAATGGTACTTCATGTTGCAAGGCTATGGACAGTTATGTATCTCACTTGCAAAAGCAAAGCTTCATAACAAATTTGCAAGCTTTAGATTGTGCCCAATTCCTTGGTGACAAGTTGCAAAAGATGAATGTCAGTATGAATGTTTATAGCTCATGTCAGATAACTCTCAAGGACTTTTCTCTTCAAGTTGGATCTCAAGAATCTGGATGCCTTCTTCCAAGTATGCCCTCAGATGCATCTTTTGACCCAGCTACTGGGATTAGTTTCACCTGCGATCTGAATGATAATATTGCTGCCCCATGGCCATCTTCTATGCAAGCATCGTCTTCTTCATGCAATAAATCTGTTAATATTCCAGAGAGACCTGCTGCGACATCGGCACAAAATGGTGTCAACCAGAACAGACTGGAGCTTAGCCTACTTATTTATCTGGGCACCCCTTGNTGGTGCTATTTGGCTACAATTCTAGTCCAGTTAGCGAATTATTAATTTCAGATTCAAGGAGAGCTGATTGGAATTGTCAACTGCNGNAGTTTTTGNGCTTGATGATCCCCATCAAAGNGTTGNANGGTTNCATGGGGCTTTTTNANTTTCCTGA]

[+] EMBL CA766325             [AGTACAAGGGGGCTATCAACGATGCCTCCCAGAAGATCTCTTTCAAAGACGGCGGTTTGACAAGCTACGCTGGTAGCCCCAAAGTTGATAGCTGCAGGAATGTCGTGCTCAGATGGCTATCCAGTAGGCTTGGCCCATCATCTGCAAAGCAAATGCTCAGGCAGATATCTAACTGCAATGTCAATGGAGTTTGTCCACTAAGCTTTCCAGACACGAGTAAAGTGGCAAAAGAGTGCAGTGGAACTGTCAAGAATGGTACTTCATGTTGCAAGGCTATGGACAGTTATGTATCTCACTTGCAAAAGCAAAGCTTCATAACAAATTTGCAAGCTTTAGATTGTGCCCAATTCCTTGGTGACAAGTTGCAAAAGATGAATGTCAGTATGAATGTTTATAGCTCATGTCAGATAACTCTCAAGGACTTTTCTCTTCAAGTTGGATCTCAAGAATCTGGATGCCTTCTTCCAAGTATGCCCTCAGATGCATCTTTTGACCCAGCTACTGGGATTAGTTTCACCTGCGATCTGAATGATAATATTGCTGCCCCATGGCCATCTTCTATGCAAGCATCGTCTTCTTCATGCAATAAATCTGTTAATATTCCAGAGAGACCTGCTGCGACATCGGCACAAAATGGTGTCAACCAGAACAGACTGGAGCTTAGCCTACTTATTTATCTGGGCACCCCTTGNTGGTGCTATTTGGCTACAATTCTAGTCCAGTTAGCGAATTATTAATTTCAGATTCAAGGAGAGCTGATTGGAATTGTCAACTGCNGNAGTTTTTGNGCTTGATGATCCCCATCAAAGNGTTGNANGGTTNCATGGGGCTTTTTNANTTTCCTGA]




>consensus_9784#1
AGTACAAGGGGGCTATCAACGATGCCTCCCAGAAGATCTCTTTCAAAGACGGCGGTTTGA
CAAGCTACGCTGGTAGCCCCAAAGTTGATAGCTGCAGGAATGTCGTGCTCAGATGGCTAT
CCAGTAGGCTTGGCCCATCATCTGCAAAGCAAATGCTCAGGCAGATATCTAACTGCAATG
TCAATGGAGTTTGTCCACTAAGCTTTCCAGACACGAGTAAAGTGGCAAAAGAGTGCAGTG
GAACTGTCAAGAATGGTACTTCATGTTGCAAGGCTATGGACAGTTATGTATCTCACTTGC
AAAAGCAAAGCTTCATAACAAATTTGCAAGCTTTAGATTGTGCCCAATTCCTTGGTGACA
AGTTGCAAAAGATGAATGTCAGTATGAATGTTTATAGCTCATGTCAGATAACTCTCAAGG
ACTTTTCTCTTCAAGTTGGATCTCAAGAATCTGGATGCCTTCTTCCAAGTATGCCCTCAG
ATGCATCTTTTGACCCAGCTACTGGGATTAGTTTCACCTGCGATCTGAATGATAATATTG
CTGCCCCATGGCCATCTTCTATGCAAGCATCGTCTTCTTCATGCAATAAATCTGTTAATA
TTCCAGAGAGACCTGCTGCGACATCGGCACAAAATGGTGTCAACCAGAACAGACTGGAGC
TTAGCCTACTTATTTATCTGGGCACCCCTTGNTGGTGCTATTTGGCTACAATTCTAGTCC
AGTTAGCGAATTATTAATTTCAGATTCAAGGAGAGCTGATTGGAATTGTCAACTGCNGNA
GTTTTTGNGCTTGATGATCCCCATCAAAGNGTTGNANGGTTNCATGGGGCTTTTTNANTT
TCCTGA

consensusID : consensus_9784#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 414
fasta sequence

                              [ATCAAAGTGTTGTAGGTTACATGTGCTTTTTAGTTCCTGATAGCTGTTAGTGTAATTTCTTGTAAGCCATATAATAGTAGTAATAATTTATTATGCCTTTGTATAGAGAGAAAGAAGGGAAAAAAATTAAAGGGTGTGAAATGCGCAGGACAATTTAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTTTTTTCCCGTTTCTTTCGAAAGGGGGAATTTTTTTAAACCCTGGGGGATTGCCCCTTTAAGGGGGGGTAATTTTGAAGTTGGGGGAATTTGGGGAAAAAATGTTTCCTGGGGAAAAATGTTTTCCCCTCAAAATTCCCCAAAAAATTAAAACCGAAAACC]

[+] EMBL CF314766             [ATCAAAGTGTTGTAGGTTACATGTGCTTTTTAGTTCCTGATAGCTGTTAGTGTAATTTCTTGTAAGCCATATAATAGTAGTAATAATTTATTATGCCTTTGTATAGAGAGAAAGAAGGGAAAAAAATTAAAGGGTGTGAAATGCGCAGGACAATTTAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTTTTTTCCCGTTTCTTTCGAAAGGGGGAATTTTTTTAAACCCTGGGGGATTGCCCCTTTAAGGGGGGGTAATTTTGAAGTTGGGGGAATTTGGGGAAAAAATGTTTCCTGGGGAAAAATGTTTTCCCCTCAAAATTCCCCAAAAAATTAAAACCGAAAACC]




>consensus_9784#2
ATCAAAGTGTTGTAGGTTACATGTGCTTTTTAGTTCCTGATAGCTGTTAGTGTAATTTCT
TGTAAGCCATATAATAGTAGTAATAATTTATTATGCCTTTGTATAGAGAGAAAGAAGGGA
AAAAAATTAAAGGGTGTGAAATGCGCAGGACAATTTAGCAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAACCCCTTTTTTCCCGTTTCTTTCGAAAGGGGGAATTTTTTTAAACCCTGGGG
GATTGCCCCTTTAAGGGGGGGTAATTTTGAAGTTGGGGGAATTTGGGGAAAAAATGTTTC
CTGGGGAAAAATGTTTTCCCCTCAAAATTCCCCAAAAAATTAAAACCGAAAACC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9784#0      CCGCTGTCCGCCTGCCTGCCTACTTTCTCCACTTTTTTCTCCTCCTCCTCCTCTTCTTCT 60
consensus_9784#1      ------------------------------------------------------------
consensus_9784#2      ------------------------------------------------------------
                                                                                  

consensus_9784#0      TCCTTCGTTTCGCCTCCTCTACTCTTCTAAGTTCCAACTTCCAACTAGCTCGACTCAAGT 120
consensus_9784#1      ------------------------------------------------------------
consensus_9784#2      ------------------------------------------------------------
                                                                                  

consensus_9784#0      GAAGAGTCCGCCGCCTTTCCCTCCTCGCCGCCGCTCGGATGGGGATGGCCCCCGCCGGTC 180
consensus_9784#1      ------------------------------------------------------------
consensus_9784#2      ------------------------------------------------------------
                                                                                  

consensus_9784#0      GCCTCCTCCTCATCTCCTGCCTCCTCTGTGTGCCCAATTCATTTGGATTTGCATTTGCTG 240
consensus_9784#1      ------------------------------------------------------------
consensus_9784#2      ------------------------------------------------------------
                                                                                  

consensus_9784#0      TGGAGGAGGAGGAGGACGGCAGCGGGCTGATGCCACAGCTCTCACCCACCGGCTCTCCCA 300
consensus_9784#1      ------------------------------------------------------------
consensus_9784#2      ------------------------------------------------------------
                                                                                  

consensus_9784#0      ACCCCTTGGTTCCCTTCCTCGCGCCCGCCCCTCTCGCGCCATTCTTCAACACCACCCCTC 360
consensus_9784#1      ------------------------------------------------------------
consensus_9784#2      ------------------------------------------------------------
                                                                                  

consensus_9784#0      CTAACTTGTCAGGCAAGTGCTCATTGAATTTTACTGCTGTCGGTGACCTCATCACCACCA 420
consensus_9784#1      ------------------------------------------------------------
consensus_9784#2      ------------------------------------------------------------
                                                                                  

consensus_9784#0      CTGCTGTCGACTGCTTTGCGTCCTTCGCCCCGTTCCTCGCCAATGTCATCTGCTGCCCCC 480
consensus_9784#1      ------------------------------------------------------------
consensus_9784#2      ------------------------------------------------------------
                                                                                  

consensus_9784#0      AGCTCCAGGCCATGCTCACCATCCTCATTGGGCAGTCCAGCAAGCAGACTGGCTCCCTTG 540
consensus_9784#1      ------------------------------------------------------------
consensus_9784#2      ------------------------------------------------------------
                                                                                  

consensus_9784#0      CTTTGGATCCCACCGTCGCTACCTACTGCCTCTCCGATGTTCAGCAGCTATTGTTGAGCC 600
consensus_9784#1      ------------------------------------------------------------
consensus_9784#2      ------------------------------------------------------------
                                                                                  

consensus_9784#0      AGGGCGCTAGTGATGAGCTCCACAACATTTGCTCCCTTCACCTCTCCAATGTCACCGAGG 660
consensus_9784#1      ------------------------------------------------------------
consensus_9784#2      ------------------------------------------------------------
                                                                                  

consensus_9784#0      GATCATGCCCCGTTAGCACCGTCGATGCCTTTGAAGCTGTCATCGACTCCTCAAAGCTCC 720
consensus_9784#1      ------------------------------------------------------------
consensus_9784#2      ------------------------------------------------------------
                                                                                  

consensus_9784#0      TCGAGGCCTGTCACAAGATTGATCCTGTCAACGAGTGCTGCAGCCGCACCTGCCAGAATG 780
consensus_9784#1      ------------------------------------------------AGTACAAGGGGG 12
consensus_9784#2      ------------------------------------------------------------
                                                                                  

consensus_9784#0      CTATCAACGATGCCTCCCAGAAGATCTCTTTCAAAGACGGCGGTTTGACAAGCTACGCTG 840
consensus_9784#1      CTATCAACGATGCCTCCCAGAAGATCTCTTTCAAAGACGGCGGTTTGACAAGCTACGCTG 72
consensus_9784#2      ------------------------------------------------------------
                                                                                  

consensus_9784#0      GTAGCCCCAAAGTTGATAGCTGCAGGAATGTCGTGCTCAGATGGCTATCCAGTAGGCTTG 900
consensus_9784#1      GTAGCCCCAAAGTTGATAGCTGCAGGAATGTCGTGCTCAGATGGCTATCCAGTAGGCTTG 132
consensus_9784#2      ------------------------------------------------------------
                                                                                  

consensus_9784#0      GCCCATCATCTGCAAAGCAAATGCTCAGGCAGATATCTAACTGCAATGTCAATGGAGTTT 960
consensus_9784#1      GCCCATCATCTGCAAAGCAAATGCTCAGGCAGATATCTAACTGCAATGTCAATGGAGTTT 192
consensus_9784#2      --------------------------------------------------------ATCA 4
                                                                               *  

consensus_9784#0      GTCCACTAAGCTTTCCAGACACGAGTAAAGTGGCAAAAGAGTGCAGTGGAACTGTCAAGA 1020
consensus_9784#1      GTCCACTAAGCTTTCCAGACACGAGTAAAGTGGCAAAAGAGTGCAGTGGAACTGTCAAGA 252
consensus_9784#2      AAGTGTTGTAGGTTACATGTGCTTTTTAGTTCCTGATAGCTGTTAGTGTAATT-TCTTGT 63
                            *     ** **    *   * *  *    * **     **** ** * **  * 

consensus_9784#0      ATGGTACTTCATGTTGCAAGGCTATGGACAGTTATGTATCTCACTTGCAAAAGCAAAGCT 1080
consensus_9784#1      ATGGTACTTCATGTTGCAAGGCTATGGACAGTTATGTATCTCACTTGCAAAAGCAAAGCT 312
consensus_9784#2      AAGCCATATAATAGTA----GTAATAATTTATTATGCCTTTGTATAGAGAGAAAGAAG-- 117
                      * *  *  * **  *     *  **      *****  * *   * *  * *   ***  

consensus_9784#0      TCATAACAAATTTGCAAGCTTTAGATTGTGCCCAATTCCTTGGTGACAAGTTGCAAAAGA 1140
consensus_9784#1      TCATAACAAATTTGCAAGCTTTAGATTGTGCCCAATTCCTTGGTGACAAGTTGCAAAAGA 372
consensus_9784#2      --GGAAAAAAATTAAAGGGTGTGAAATGCGCAGGACAATTTAGCAAAAAAAAAAAAAAAA 175
                          ** *** **  * * * *  * ** **   *    ** *  * **     **** *

consensus_9784#0      TGAATGTCAGTATGAATGTTTATAGCTCATGTCAGATAACTCTCAAGGACTTTTCTCTTC 1200
consensus_9784#1      TGAATGTCAGTATGAATGTTTATAGCTCATGTCAGATAACTCTCAAGGACTTTTCTCTTC 432
consensus_9784#2      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA--------- 226
                        **    *  *  **     * *    *    * * **     **  *           

consensus_9784#0      AAGTTGGATCTCAAGAATCTGGATGCCTTCTTCCAAGTATGCCCTCGGATGCATCTTTTG 1260
consensus_9784#1      AAGTTGGATCTCAAGAATCTGGATGCCTTCTTCCAAGTATGCCCTCAGATGCATCTTTTG 492
consensus_9784#2      AAAAAAAAAAAAAAAAAAAAAAACCCCTTTTTTCCCGT-TTCTTTCGAAAGGGGGAATTT 285
                      **     *    ** **     *  **** ** *  ** * *  **  * *      ** 

consensus_9784#0      ACCCAGCTACTGGGATTAGTTTCACATGCGATCTGAATGATAATATTGCTGCCCCATGGC 1320
consensus_9784#1      ACCCAGCTACTGGGATTAGTTTCACCTGCGATCTGAATGATAATATTGCTGCCCCATGGC 552
consensus_9784#2      TTTTAAACCCTGGGG--GATTGCCCCTTTAA--GGGGGGGTAATTTTGAAGTTGGGGGAA 341
                          *    *****     ** * * *   *   *   * **** ***  *      *  

consensus_9784#0      CATCTTCTATGCAAGCATCGTCTTCTTCATGCAATAAATCTGTTAATATTCCAGAGAGAC 1380
consensus_9784#1      CATCTTCTATGCAAGCATCGTCTTCTTCATGCAATAAATCTGTTAATATTCCAGAGAGAC 612
consensus_9784#2      -----TTTGGGGAAAAAATGTTTCCTG---GGGAAAAATGTTTT-----CCCCTCAAAAT 388
                           * *  * **  *  ** * **    *  * **** * **      **    * * 

consensus_9784#0      CTGCTGCGACATCGGCACAAAATGGTGTCAACCAGAACAGACTGGAGCTTAGCCTACTTA 1440
consensus_9784#1      CTGCTGCGACATCGGCACAAAATGGTGTCAACCAGAACAGACTGGAGCTTAGCCTACTTA 672
consensus_9784#2      TCCCCAAAAAATTAAAACCGAAAACC---------------------------------- 414
                         *    * **    **  **                                      

consensus_9784#0      TTTATCTGGGCACCC-TTGTTGTTGCTATTTGGCTACAAGTCTAGTCCAGTTAGCGAATT 1499
consensus_9784#1      TTTATCTGGGCACCCCTTGNTGGTGCTATTTGGCTACAATTCTAGTCCAGTTAGCGAATT 732
consensus_9784#2      ------------------------------------------------------------
                                                                                  

consensus_9784#0      ATTAATTTCAGATTCA-GGAGAGCTGATTGGAATTGTCAACTGCGGA-GTTTTTGTGCTT 1557
consensus_9784#1      ATTAATTTCAGATTCAAGGAGAGCTGATTGGAATTGTCAACTGCNGNAGTTTTTGNGCTT 792
consensus_9784#2      ------------------------------------------------------------
                                                                                  

consensus_9784#0      GATGATCAC-ATCAAAGTGTTGTAGG-TTACATGTGCTTTTTAGTTCCTGATAGCTGTTA 1615
consensus_9784#1      GATGATCCCCATCAAAGNGTTGNANGGTTNCATGGGGCTTTTTNANTTTCCTGA------ 846
consensus_9784#2      ------------------------------------------------------------
                                                                                  

consensus_9784#0      GTGTAATTTCTTGTAAGCCATATAATAGTAGTAATAATTTATTATGCCTTTGTATAGAGA 1675
consensus_9784#1      ------------------------------------------------------------
consensus_9784#2      ------------------------------------------------------------
                                                                                  

consensus_9784#0      GAAAGAAGGGAAAAAAATTAAAGGGTGTGAAATGCGCAGGACAATTTAGCAAGACCACTG 1735
consensus_9784#1      ------------------------------------------------------------
consensus_9784#2      ------------------------------------------------------------
                                                                                  

consensus_9784#0      TTGTCTGATGGGAGTACATCATATTGGGATGGACTACACTCCATTATTGTTTAGAATTTA 1795
consensus_9784#1      ------------------------------------------------------------
consensus_9784#2      ------------------------------------------------------------
                                                                                  

consensus_9784#0      TATTATTCAATTGTTCATTTTCTGATGTATGAATTAATCATGACAGAGAATCATATAATC 1855
consensus_9784#1      ------------------------------------------------------------
consensus_9784#2      ------------------------------------------------------------
                                                                                  

consensus_9784#0      TCATCTG 1862
consensus_9784#1      -------
consensus_9784#2      -------