cluster # 9791

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 9791 cluster # 9791 Sequences # 6 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9791#0 length = 1677 sequences # 3

consensus_9791#1 length = 698 sequences # 1
consensus_9791#2 length = 447 sequences # 2

consensusID : consensus_9791#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1677
fasta sequence

                              [CAAACCCTCGCGCCGCCGCCGCTCTCTCCCACCCGCCGCCGCCGCCGCCATGGACGCCGGCGAGACCTCCACCTCGGACTCGCTGGTACTTGCCACGGGCGCCGCGCAGGGACCAAAGAGGAAGCCGCCCCCGAAGCGCTTCGTCCACACGCCCATCCCGCCCTCCATCCTCTCCGACCCAACCCTCGCCGCTGCCGCCACCGGCCTCCTCCCGGCGGCGTACAACTTCGAGCTCCCCAAGACGGCGCACCGCATCCGCTCCTCCGGCGCCCGCCGCACCGCGCTGCAGCTTCCGGAGGGTTTGCTCCTCTTCTCCCTCCCGCTTTCCCACCTCCTCGCGCCCTTCCTCGAGCCGGACCCCTCCAACGACGTCCTCATCCTCGCCGATCCCACCTACGGCGCGTGCTGCCTCGCCGACCGCCCCGCCAAGGCGCTCGCCGCCGACGTGCTCGTCCACTACGGCCATTCCTGCCTCGTCCCCGTCACCTCCTCCCTCCTCCCCGTGCTCTACGTCTTCGTCGAGATCCGTGTCGACGCCCAACGCCTCGCCGACGCTGTCCGCGCCGCCTTCCCGGACCCCGCCGATGCGCCCCGCCTCGCCATCGCCGGCACCGTGCAGTTCATTTCGGCAGTTCACGCAGCGCGTGAGATCCTCAGTCACGATGGTTACCAGGGCATCGTCGTGCCACAGGCAAAGCCGCTGTCCGCCGGCGAGGTTCTTGGGTGCACAGCACCTGCCCTGAAAAGGTCCGAGGGGGTCGGAGCGGTGGTGTTCGTCGCAGACGGGAGATTCCACCTCGAGGCATTCATGATTGCCAATCCCGGGGTCAAGGCCTACCGCTTTGATCCATTCCTGGGTGTGCTTGTGCTGGAGGAGTATGACCATGTCGGGATGAAGCAAGCGAGGAAGGAGGCGGTGCTGGCAGCAAGGAAGGCCAAGAGTTGGGGAGTTATACTAGGCACCCTTGGGCGGCAGGGAAGCGTAAAAGTTCTCGACAGGGTGGTGGAGCATTTGGAGGAGAAAGGGCTGGAACACACAGTAGTGCTCATGTCGGAGCTGTCCCCGGCAAGGATGGAGCTGTTTGGGGATTCGGTGGATGCGTGGGTGCAGATTGCATGCCCACGTTTGTCGATTGACTGGGGTGAAGGATTCAAGAAGCCAATGCTGACGACATTCGAGTTTGATGTTGCACTGGGCTATGTTCCTGGATGGTGGGAGAAGGGGAGTAGGGAATGTGGCAGTGGAGATGCCACCGGTTGTTGTTCAGGATCAGGAACTTCCACAGATTGTGGTTGCAGCAATGGTGGTTGTGCTGACAAGGACTTTGGGGGGGAGTACCCAATGGATTACTACTCTCAGGATGGAGGTGATTGGAACAGCTGCTACATGAAGAAGAAGCCCTCTACTGGAGAGAGAAAGCTGCGAGTTCGGATTGGCAGCAAAGTTCAAGTTGAGGATAAGCAACAAAGCTAATATCGTTGAAACGAGATATCAAGAGCAGCTTCATGTTTCTTCAGAAGTTTTGACACCAGAGTTGAATAGTATTTTTGATCTTAGCACTGCCGTTACGAGTGCTGTGATATCTGTATCTGTACACAGATGTAAACTACTCGATCCTGCGCCACACTGTAATGCTGTGATGTTGTCTTCCCATAAAGGTGAAATGATTCTAAGTT]

[+] EMBL AK059429             [CAAACCCTCGCGCCGCCGCCGCTCTCTCCCACCCGCCGCCGCCGCCGCCATGGACGCCGGCGAGACCTCCACCTCGGACTCGCTGGTACTTGCCACGGGCGCCGCGCAGGGACCAAAGAGGAAGCCGCCCCCGAAGCGCTTCGTCCACACGCCCATCCCGCCCTCCATCCTCTCCGACCCAACCCTCGCCGCTGCCGCCACCGGCCTCCTCCCGGCGGCGTACAACTTCGAGCTCCCCAAGACGGCGCACCGCATCCGCTCCTCCGGCGCCCGCCGCACCGCGCTGCAGCTTCCGGAGGGTTTGCTCCTCTTCTCCCTCCCGCTTTCCCACCTCCTCGCGCCCTTCCTCGAGCCGGACCCCTCCAACGACGTCCTCATCCTCGCCGATCCCACCTACGGCGCGTGCTGCCTCGCCGACCGCCCCGCCAAGGCGCTCGCCGCCGACGTGCTCGTCCACTACGGCCATTCCTGCCTCGTCCCCGTCACCTCCTCCCTCCTCCCCGTGCTCTACGTCTTCGTCGAGATCCGTGTCGACGCCCAACGCCTCGCCGACGCTGTCCGCGCCGCCTTCCCGGACCCCGCCGATGCGCCCCGCCTCGCCATCGCCGGCACCGTGCAGTTCATTTCGGCAGTTCACGCAGCGCGTGAGATCCTCAGTCACGATGGTTACCAGGGCATCGTCGTGCCACAGGCAAAGCCGCTGTCCGCCGGCGAGGTTCTTGGGTGCACAGCACCTGCCCTGAAAAGGTCCGAGGGGGTCGGAGCGGTGGTGTTCGTCGCAGACGGGAGATTCCACCTCGAGGCATTCATGATTGCCAATCCCGGGGTCAAGGCCTACCGCTTTGATCCATTCCTGGGTGTGCTTGTGCTGGAGGAGTATGACCATGTCGGGATGAAGCAAGCGAGGAAGGAGGCGGTGCTGGCAGCAAGGAAGGCCAAGAGTTGGGGAGTTATACTAGGCACCCTTGGGCGGCAGGGAAGCGTAAAAGTTCTCGACAGGGTGGTGGAGCATTTGGAGGAGAAAGGGCTGGAACACACAGTAGTGCTCATGTCGGAGCTGTCCCCGGCAAGGATGGAGCTGTTTGGGGATTCGGTGGATGCGTGGGTGCAGATTGCATGCCCACGTTTGTCGATTGACTGGGGTGAAGGATTCAAGAAGCCAATGCTGACGACATTCGAGTTTGATGTTGCACTGGGCTATGTTCCTGGATGGTGGGAGAAGGGGAGTAGGGAATGTGGCAGTGGAGATGCCACCGGTTGTTGTTCAGGATCAGGAACTTCCACAGATTGTGGTTGCAGCAATGGTGGTTGTGCTGACAAGGACTTTGGGGGGGAGTACCCAATGGATTACTACTCTCAGGATGGAGGTGATTGGAACAGCTGCTACATGAAGAAGAAGCCCTCTACTGGAGAGAGAAAGCTGCGAGTTCGGATTGGCAGCAAAGTTCAAGTTGAGGATAAGCAACAAAGCTAATATCGTTGAAACGAGATATCAAGAGCAGCTTCATGTTTCTTCAGAAGTTTTGACACCAGAGTTGAATAGTATTTTTGATCTTAGCACTGCCGTTACGAGTGCTGTGATATCTGTATCTGTACACAGATGTAAACTACTCGATCCTGCGCCACACTGTAATGCTGTGATGTTGTCTTCCCATAAAGGTGAAATGATTCTAAGTT]
[+] EMBL AK099042             [CAAACCCTCGCGCCGCCGCCGCTCTCTCCCACCCGCCGCCGCCGCCGCCATGGACGCCGGCGAGACCTCCACCTCGGACTCGCTGGTACTTGCCACGGGCGCCGCGCAGGGACCAAAGAGGAAGCCGCCCCCGAAGCGCTTCGTCCACACGCCCATCCCGCCCTCCATCCTCTCCGACCCAACCCTCGCCGCTGCCGCCACCGGCCTCCTCCCGGCGGCGTACAACTTCGAGCTCCCCAAGACGGCGCACCGCATCCGCTCCTCCGGCGCCCGCCGCACCGCGCTGCAGCTTCCGGAGGGTTTGCTCCTCTTCTCCCTCCCGCTTTCCCACCTCCTCGCGCCCTTCCTCGAGCCGGACCCCTCCAACGACGTCCTCATCCTCGCCGATCCCACCTACGGCGCGTGCTGCCTCGCCGACCGCCCCGCCAAGGCGCTCGCCGCCGACGTGCTCGTCCACTACGGCCATTCCTGCCTCGTCCCCGTCACCTCCTCCCTCCTCCCCGTGCTCTACGTCTTCGTCGAGATCCGTGTCGACGCCCAACGCCTCGCCGACGCTGTCCGCGCCGCCTTCCCGGACCCCGCCGATGCGCCCCGCCTCGCCATCGCCGGCACCGTGCAGTTCATTTCGGCAGTTCACGCAGCGCGTGAGATCCTCAGTCACGATGGTTACCAGGGCATCGTCGTGCCACAGGCAAAGCCGCTGTCCGCCGGCGAGGTTCTTGGGTGCACAGCACCTGCCCTGAAAAGGTCCGAGGGGGTCGGAGCGGTGGTGTTCGTCGCAGACGGGAGATTCCACCTCGAGGCATTCATGATTGCCAATCCCGGGGTCAAGGCCTACCGCTTTGATCCATTCCTGGGTGTGCTTGTGCTGGAGGAGTATGACCATGTCGGGATGAAGCAAGCGAGGAAGGAGGCGGTGCTGGCAGCAAGGAAGGCCAAGAGTTGGGGAGTTATACTAGGCACCCTTGGGCGGCAGGGAAGCGTAAAAGTTCTCGACAGGGTGGTGGAGCATTTGGAGGAGAAAGGGCTGGAACACACAGTAGTGCTCATGTCGGAGCTGTCCCCGGCAAGGATGGAGCTGTTTGGGGATTCGGTGGATGCGTGGGTGCAGATTGCATGCCCACGTTTGTCGATTGACTGGGGTGAAGGATTCAAGAAGCCAATGCTGACGACATTCGAGTTTGATGTTGCACTGGGCTATGTTCCTGGATGGTGGGAGAAGGGGAGTAGGGAATGTGGCAGTGGAGATGCCACCGGTTGTTGTTCAGGATCAGGAACTTCCACAGATTGTGGTTGCAGCAATGGTGGTTGTGCTGACAAGGACTTTGGGGGGGAGTACCCAATGGATTACTACTCTCAGGATGGAGGTGATTGGAACAGCTGCTACATGAAGAAGAAGCCCTCTACTGGAGAGAGAAAGCTGCGAGTTCGGATTGGCAGCAAAGTTCAAGTTGAGGATAAGCAACAAAGCTAATATCGTTGAAACGAGATATCAAGAGCAGCTTCATGTTTCTTCAGAAGTTTTGACACCAGAGTTGAATAGTATTTTTGATCTTAGCACTGCCGTTACGAGTGCTGTGATATCTGTATCTGTACACAGATGTAAACTACTCGATCCTGCGCCACACTGTAATGCTGTGATGTTGTCTTCCCATAAAGGTG               ]
[+] EMBL OS0379A              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATTGACTGGGGTGAAGGATTCAAGAAGCCAATGCTGACGACATTCGAGTTTGATGTTGCACTGGGCTATGTTCCTGGATGGTGGGAGAAGGGGAGTAGGGAATGTGGCAGTGGAGATGCCACCGGTTGTTGTTCAGGATCAGGAACTTCCACAGATTGTGGTTGCAGCAATGGTGGTTGTGCTGACAAGGACTTTGGGGGGGAGTACCCAATGGATTACTACTCTCAGGATGGAGGTGATTGGAACAGCTGCTACATGAAGAAGAAGCCCTCTACTGGAGAGAGAAAGCTGCGAGTTCGGATTG                                                                                                                                                                                                                                                 ]




>consensus_9791#0
CAAACCCTCGCGCCGCCGCCGCTCTCTCCCACCCGCCGCCGCCGCCGCCATGGACGCCGG
CGAGACCTCCACCTCGGACTCGCTGGTACTTGCCACGGGCGCCGCGCAGGGACCAAAGAG
GAAGCCGCCCCCGAAGCGCTTCGTCCACACGCCCATCCCGCCCTCCATCCTCTCCGACCC
AACCCTCGCCGCTGCCGCCACCGGCCTCCTCCCGGCGGCGTACAACTTCGAGCTCCCCAA
GACGGCGCACCGCATCCGCTCCTCCGGCGCCCGCCGCACCGCGCTGCAGCTTCCGGAGGG
TTTGCTCCTCTTCTCCCTCCCGCTTTCCCACCTCCTCGCGCCCTTCCTCGAGCCGGACCC
CTCCAACGACGTCCTCATCCTCGCCGATCCCACCTACGGCGCGTGCTGCCTCGCCGACCG
CCCCGCCAAGGCGCTCGCCGCCGACGTGCTCGTCCACTACGGCCATTCCTGCCTCGTCCC
CGTCACCTCCTCCCTCCTCCCCGTGCTCTACGTCTTCGTCGAGATCCGTGTCGACGCCCA
ACGCCTCGCCGACGCTGTCCGCGCCGCCTTCCCGGACCCCGCCGATGCGCCCCGCCTCGC
CATCGCCGGCACCGTGCAGTTCATTTCGGCAGTTCACGCAGCGCGTGAGATCCTCAGTCA
CGATGGTTACCAGGGCATCGTCGTGCCACAGGCAAAGCCGCTGTCCGCCGGCGAGGTTCT
TGGGTGCACAGCACCTGCCCTGAAAAGGTCCGAGGGGGTCGGAGCGGTGGTGTTCGTCGC
AGACGGGAGATTCCACCTCGAGGCATTCATGATTGCCAATCCCGGGGTCAAGGCCTACCG
CTTTGATCCATTCCTGGGTGTGCTTGTGCTGGAGGAGTATGACCATGTCGGGATGAAGCA
AGCGAGGAAGGAGGCGGTGCTGGCAGCAAGGAAGGCCAAGAGTTGGGGAGTTATACTAGG
CACCCTTGGGCGGCAGGGAAGCGTAAAAGTTCTCGACAGGGTGGTGGAGCATTTGGAGGA
GAAAGGGCTGGAACACACAGTAGTGCTCATGTCGGAGCTGTCCCCGGCAAGGATGGAGCT
GTTTGGGGATTCGGTGGATGCGTGGGTGCAGATTGCATGCCCACGTTTGTCGATTGACTG
GGGTGAAGGATTCAAGAAGCCAATGCTGACGACATTCGAGTTTGATGTTGCACTGGGCTA
TGTTCCTGGATGGTGGGAGAAGGGGAGTAGGGAATGTGGCAGTGGAGATGCCACCGGTTG
TTGTTCAGGATCAGGAACTTCCACAGATTGTGGTTGCAGCAATGGTGGTTGTGCTGACAA
GGACTTTGGGGGGGAGTACCCAATGGATTACTACTCTCAGGATGGAGGTGATTGGAACAG
CTGCTACATGAAGAAGAAGCCCTCTACTGGAGAGAGAAAGCTGCGAGTTCGGATTGGCAG
CAAAGTTCAAGTTGAGGATAAGCAACAAAGCTAATATCGTTGAAACGAGATATCAAGAGC
AGCTTCATGTTTCTTCAGAAGTTTTGACACCAGAGTTGAATAGTATTTTTGATCTTAGCA
CTGCCGTTACGAGTGCTGTGATATCTGTATCTGTACACAGATGTAAACTACTCGATCCTG
CGCCACACTGTAATGCTGTGATGTTGTCTTCCCATAAAGGTGAAATGATTCTAAGTT

consensusID : consensus_9791#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 698
fasta sequence

                              [TGGGNGAAGCGCNGACCCCCTTGTCTCATGTCGACNNCCCGCAGGTNNGAACTTTTTTGGGATTCGNTTGGNTCCTGGGTCNCGAGTCGATCGCCCCCCCTGTGTCGCGTGCCGTCGGGGGTTGGTGGTTTCTCGATGATCCCCCCAGTTTCGTGCTGCCCCCTTCGGAGTTTGTGGTGGGTCCCCTGGGGCCTATGTTCCCNNGGGATGGTTGGGAGAAGGGGANGTNGGTAATGTGCCAGTGGAGATCCACCCGTTTGTTGTTCAGGTATCNGGAACTTCCACCGATTGTTGTTCCNCCATGTTGTTGTGCTGACACAGGACTTTGGGGGGGAGTACCCCATGGATTACTACTCTCACGGGTGGAGGTGATTGGAACACTGCTACCTGAAGAAGAAGCCCTCTACTGGAGAGAGAAAGCTGCGAGTTCGGATTGCCACCCAAGTTCACAGTTGAGGATAANCNCCCAAGCTAATATCGTTGAAACGAGATATCCACAGACCAGCTTCATGTTTCTTCAGAAGTTTGNGACNCCCACGAGTTGAATAGTATTTTTGATCTTAGCCCTNCCGTTACCGAGTGCTGTGATATCTGTATCTGTACCCAGATGTAAACTACTCGATCCNGCGCCCCCCTGTAATCCTGTGATGTTGGTCTTCCCATAAAGGTGAAATGGATTCTAAGTTTATGGAGCCCCA]

[+] EMBL BM038638             [TGGGNGAAGCGCNGACCCCCTTGTCTCATGTCGACNNCCCGCAGGTNNGAACTTTTTTGGGATTCGNTTGGNTCCTGGGTCNCGAGTCGATCGCCCCCCCTGTGTCGCGTGCCGTCGGGGGTTGGTGGTTTCTCGATGATCCCCCCAGTTTCGTGCTGCCCCCTTCGGAGTTTGTGGTGGGTCCCCTGGGGCCTATGTTCCCNNGGGATGGTTGGGAGAAGGGGANGTNGGTAATGTGCCAGTGGAGATCCACCCGTTTGTTGTTCAGGTATCNGGAACTTCCACCGATTGTTGTTCCNCCATGTTGTTGTGCTGACACAGGACTTTGGGGGGGAGTACCCCATGGATTACTACTCTCACGGGTGGAGGTGATTGGAACACTGCTACCTGAAGAAGAAGCCCTCTACTGGAGAGAGAAAGCTGCGAGTTCGGATTGCCACCCAAGTTCACAGTTGAGGATAANCNCCCAAGCTAATATCGTTGAAACGAGATATCCACAGACCAGCTTCATGTTTCTTCAGAAGTTTGNGACNCCCACGAGTTGAATAGTATTTTTGATCTTAGCCCTNCCGTTACCGAGTGCTGTGATATCTGTATCTGTACCCAGATGTAAACTACTCGATCCNGCGCCCCCCTGTAATCCTGTGATGTTGGTCTTCCCATAAAGGTGAAATGGATTCTAAGTTTATGGAGCCCCA]




>consensus_9791#1
TGGGNGAAGCGCNGACCCCCTTGTCTCATGTCGACNNCCCGCAGGTNNGAACTTTTTTGG
GATTCGNTTGGNTCCTGGGTCNCGAGTCGATCGCCCCCCCTGTGTCGCGTGCCGTCGGGG
GTTGGTGGTTTCTCGATGATCCCCCCAGTTTCGTGCTGCCCCCTTCGGAGTTTGTGGTGG
GTCCCCTGGGGCCTATGTTCCCNNGGGATGGTTGGGAGAAGGGGANGTNGGTAATGTGCC
AGTGGAGATCCACCCGTTTGTTGTTCAGGTATCNGGAACTTCCACCGATTGTTGTTCCNC
CATGTTGTTGTGCTGACACAGGACTTTGGGGGGGAGTACCCCATGGATTACTACTCTCAC
GGGTGGAGGTGATTGGAACACTGCTACCTGAAGAAGAAGCCCTCTACTGGAGAGAGAAAG
CTGCGAGTTCGGATTGCCACCCAAGTTCACAGTTGAGGATAANCNCCCAAGCTAATATCG
TTGAAACGAGATATCCACAGACCAGCTTCATGTTTCTTCAGAAGTTTGNGACNCCCACGA
GTTGAATAGTATTTTTGATCTTAGCCCTNCCGTTACCGAGTGCTGTGATATCTGTATCTG
TACCCAGATGTAAACTACTCGATCCNGCGCCCCCCTGTAATCCTGTGATGTTGGTCTTCC
CATAAAGGTGAAATGGATTCTAAGTTTATGGAGCCCCA

consensusID : consensus_9791#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 447
fasta sequence

                              [TTGACTGGGGTGAAGGATTCAAGAAGCCAATGCTGACGACATTCGAGTTTGATGTTGCACTGGGCTATGTTCCTGGATGGTGGGAGAAGGGGAGTAGGGAATGTGGCAGTGGAGATGCCACCGGTTGTTGTTCAGGATCAGGAACTTCCACAGATTGTGGTTGCAGCAATGGTGGTTGTGCTGACAAGGACTTTGGGGGGGAGTACCCAATGGATTACTACTCTCAGGATGGAGGTGATTGGAACAGCTGCTACATGAAGAAGAAGCCCTCTACTGGAGAGAGAAAGCTGCGAGTTCGGATTGGTAATTACTCAAATTCATAGTAGTTTACATGTGGCCTTTTTGTCTGTCCTTTTTCCCCTGTATACTGGGGCGAAATGCTTGTGTAACTCTTACATTCTGAATTTTTCAATATTACCGGCATATCTATATGTTTTGTCAAAAAAA]

[+] EMBL C98017               [TTGACTGGGGTGAAGGATTCAAGAAGCCAATGCTGACGACATTCGAGTTTGATGTTGCACTGGGCTATGTTCCTGGATGGTGGGAGAAGGGGAGTAGGGAATGTGGCAGTGGAGATGCCACCGGTTGTTGTTCAGGATCAGGAACTTCCACAGATTGTGGTTGCAGCAATGGTGGTTGTGCTGACAAGGACTTTGGGGGGGAGTACCCAATGGATTACTACTCTCAGGATGGAGGTGATTGGAACAGCTGCTACATGAAGAAGAAGCCCTCTACTGGAGAGAGAAAGCTGCGAGTTCGGATTGGTAATTACTCAAATTCATAGTAGTTTACATGTGGCCTTTTTGTCTGTCCTTTTTCCCCTGTATACTGGGGCGAAATGCTTGTGTAACTCTTACATTCTGAATTTTTCAATATTACCGGCATATCTATATGTTTTGTCAAAAAAA]
[+] EMBL CA999604             [                                                                                                                    GCCACCGGTTGTTGTTCAGGATCAGGAACTTCCACAGATTGTGGTTGCAGCAATGGTGGTTGTGCTGACAAGGACTTTGGGGGGGAGTACCCAATGGATTACTACTCTCAGGATGGAGGTGATTGGAACAGCTGCTACATGAAGAAGAAGCCCTCTACTGGAGAGAGAAAGCTGCGAGTTCGGATTGGTAATTACTCAAATTCATAGTAGTTTACATGTGGCCTTTTTGTCTGTCCTTTTTCCCCTGTATACTGGGGCGAAATGCTTGTGTAACTCTTACATTCTGAATTTTTCAATATTACCGGCATATCTATATGGTTTGgcca     ]




>consensus_9791#2
TTGACTGGGGTGAAGGATTCAAGAAGCCAATGCTGACGACATTCGAGTTTGATGTTGCAC
TGGGCTATGTTCCTGGATGGTGGGAGAAGGGGAGTAGGGAATGTGGCAGTGGAGATGCCA
CCGGTTGTTGTTCAGGATCAGGAACTTCCACAGATTGTGGTTGCAGCAATGGTGGTTGTG
CTGACAAGGACTTTGGGGGGGAGTACCCAATGGATTACTACTCTCAGGATGGAGGTGATT
GGAACAGCTGCTACATGAAGAAGAAGCCCTCTACTGGAGAGAGAAAGCTGCGAGTTCGGA
TTGGTAATTACTCAAATTCATAGTAGTTTACATGTGGCCTTTTTGTCTGTCCTTTTTCCC
CTGTATACTGGGGCGAAATGCTTGTGTAACTCTTACATTCTGAATTTTTCAATATTACCG
GCATATCTATATGTTTTGTCAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9791#0      CAAACCCTCGCGCCGCCGCCGCTCTCTCCCACCCGCCGCCGCCGCCGCCATGGACGCCGG 60
consensus_9791#1      ------------------------------------------------------------
consensus_9791#2      ------------------------------------------------------------
                                                                                  

consensus_9791#0      CGAGACCTCCACCTCGGACTCGCTGGTACTTGCCACGGGCGCCGCGCAGGGACCAAAGAG 120
consensus_9791#1      ------------------------------------------------------------
consensus_9791#2      ------------------------------------------------------------
                                                                                  

consensus_9791#0      GAAGCCGCCCCCGAAGCGCTTCGTCCACACGCCCATCCCGCCCTCCATCCTCTCCGACCC 180
consensus_9791#1      ------------------------------------------------------------
consensus_9791#2      ------------------------------------------------------------
                                                                                  

consensus_9791#0      AACCCTCGCCGCTGCCGCCACCGGCCTCCTCCCGGCGGCGTACAACTTCGAGCTCCCCAA 240
consensus_9791#1      ------------------------------------------------------------
consensus_9791#2      ------------------------------------------------------------
                                                                                  

consensus_9791#0      GACGGCGCACCGCATCCGCTCCTCCGGCGCCCGCCGCACCGCGCTGCAGCTTCCGGAGGG 300
consensus_9791#1      ------------------------------------------------------------
consensus_9791#2      ------------------------------------------------------------
                                                                                  

consensus_9791#0      TTTGCTCCTCTTCTCCCTCCCGCTTTCCCACCTCCTCGCGCCCTTCCTCGAGCCGGACCC 360
consensus_9791#1      ------------------------------------------------------------
consensus_9791#2      ------------------------------------------------------------
                                                                                  

consensus_9791#0      CTCCAACGACGTCCTCATCCTCGCCGATCCCACCTACGGCGCGTGCTGCCTCGCCGACCG 420
consensus_9791#1      ------------------------------------------------------------
consensus_9791#2      ------------------------------------------------------------
                                                                                  

consensus_9791#0      CCCCGCCAAGGCGCTCGCCGCCGACGTGCTCGTCCACTACGGCCATTCCTGCCTCGTCCC 480
consensus_9791#1      ------------------------------------------------------------
consensus_9791#2      ------------------------------------------------------------
                                                                                  

consensus_9791#0      CGTCACCTCCTCCCTCCTCCCCGTGCTCTACGTCTTCGTCGAGATCCGTGTCGACGCCCA 540
consensus_9791#1      ------------------------------------------------------------
consensus_9791#2      ------------------------------------------------------------
                                                                                  

consensus_9791#0      ACGCCTCGCCGACGCTGTCCGCGCCGCCTTCCCGGACCCCGCCGATGCGCCCCGCCTCGC 600
consensus_9791#1      ------------------------------------------------------------
consensus_9791#2      ------------------------------------------------------------
                                                                                  

consensus_9791#0      CATCGCCGGCACCGTGCAGTTCATTTCGGCAGTTCACGCAGCGCGTGAGATCCTCAGTCA 660
consensus_9791#1      ------------------------------------------------------------
consensus_9791#2      ------------------------------------------------------------
                                                                                  

consensus_9791#0      CGATGGTTACCAGGGCATCGTCGTGCCACAGGCAAAGCCGCTGTCCGCCGGCGAGGTTCT 720
consensus_9791#1      ------------------------------------------------------------
consensus_9791#2      ------------------------------------------------------------
                                                                                  

consensus_9791#0      TGGGTGCACAGCACCTGCCCTGAAAAGGTCCGAGGGGGTCGGAGCGGTGGTGTTCGTCGC 780
consensus_9791#1      ------------------------------------------------------------
consensus_9791#2      ------------------------------------------------------------
                                                                                  

consensus_9791#0      AGACGGGAGATTCCACCTCGAGGCATTCATGATTGCCAATCCCGGGGTCAAGGCCTACCG 840
consensus_9791#1      ------------------------------------------------------------
consensus_9791#2      ------------------------------------------------------------
                                                                                  

consensus_9791#0      CTTTGATCCATTCCTGGGTGTGCTTGTGCTGGAGGAGTATGACCATGTCGGGATGAAGCA 900
consensus_9791#1      ------------------------------------------------------------
consensus_9791#2      ------------------------------------------------------------
                                                                                  

consensus_9791#0      AGCGAGGAAGGAGGCGGTGCTGGCAGCAAGGAAGGCCAAGAGTTGGGGAGTTATACTAGG 960
consensus_9791#1      ------------------------------------------------------------
consensus_9791#2      ------------------------------------------------------------
                                                                                  

consensus_9791#0      CACCCTTGGGCGGCAGGGAAGCGTAAAAGTTCTCGACAGGGTGGTGGAGCATTTGGAGGA 1020
consensus_9791#1      --------------------------------------------------------TGGG 4
consensus_9791#2      ------------------------------------------------------------
                                                                                  

consensus_9791#0      GAAAGGGCTGGAACACACAGTAGTGCTCATGTCGGAGCTGTCCCCGGCAAGGATGGAGCT 1080
consensus_9791#1      NGAAGCGCNG----ACCCCCTTGT-CTCATGTCGA-----CNNCCCGCA-GGTNNGAACT 53
consensus_9791#2      ------------------------------------------------------------
                                                                                  

consensus_9791#0      GTTTGGGGATTCGGTGGATGCGTGGGT-GCAGATTGCATGCCCACGTT-TGTCGATTGAC 1138
consensus_9791#1      TTTTTGGGATTCGNTTGGNTCCTGGGTCNCGAGTCGATCGCCCCCCCTGTGTCGCGTGCC 113
consensus_9791#2      -------------------------------------------------------TTGAC 5
                                                                              ** *

consensus_9791#0      T----GGGGTGAAGGATTCAAGAAG------CCAAT-----GCTGACGACATTCGAGTTT 1183
consensus_9791#1      GTCGGGGGTTGGTGGTTTCTCGATGATCCCCCCAGTTTCGTGCTGCCCCCTTCGGAGTTT 173
consensus_9791#2      T----GGGGTGAAGGATTCAAGAAG------CCAAT-----GCTGACGACATTCGAGTTT 50
                           *** **  ** ***  ** *      *** *     **** *  * *  ******

consensus_9791#0      GATGTTG---CACTGGG--CTATGTTCCTGG---ATGGT-GGGAGAAGGGGAG-TAGGGA 1233
consensus_9791#1      GTGGTGGGTCCCCTGGGGCCTATGTTCCCNNGGGATGGTTGGGAGAAGGGGANGTNGGTA 233
consensus_9791#2      GATGTTG---CACTGGG--CTATGTTCCTGG---ATGGT-GGGAGAAGGGGAG-TAGGGA 100
                      *  ** *   * *****  *********      ***** ************  * ** *

consensus_9791#0      ATGTGGCAGTGGAGATGCCACCGGTTGTTGTTCAGG-ATCAGGAACTTCCACAGATTGTG 1292
consensus_9791#1      ATGTGCCAGTGGAGATCCACCCGTTTGTTGTTCAGGTATCNGGAACTTCCACCGATTGTT 293
consensus_9791#2      ATGTGGCAGTGGAGATGCCACCGGTTGTTGTTCAGG-ATCAGGAACTTCCACAGATTGTG 159
                      ***** ********** *  *** ************ *** *********** ****** 

consensus_9791#0      GTTGCAGCAATGGTGGTTGTGCTGACA-AGGACTTTGGGGGGGAGTACCCAATGGATTAC 1351
consensus_9791#1      GTTCCNCCAT--GTTGTTGTGCTGACACAGGACTTTGGGGGGGAGTACCCCATGGATTAC 351
consensus_9791#2      GTTGCAGCAATGGTGGTTGTGCTGACA-AGGACTTTGGGGGGGAGTACCCAATGGATTAC 218
                      *** *  **   ** ************ ********************** *********

consensus_9791#0      TACTCTCA-GGATGGAGGTGATTGGAACAGCTGCTACATGAAGAAGAAGCCCTCTACTGG 1410
consensus_9791#1      TACTCTCACGGGTGGAGGTGATTGGAACA-CTGCTACCTGAAGAAGAAGCCCTCTACTGG 410
consensus_9791#2      TACTCTCA-GGATGGAGGTGATTGGAACAGCTGCTACATGAAGAAGAAGCCCTCTACTGG 277
                      ******** ** ***************** ******* **********************

consensus_9791#0      AGAGAGAAAGCTGCGAGTTCGGATTGGCAGCAAAGTTCA-AGTTGAGGATAAGCAACAAA 1469
consensus_9791#1      AGAGAGAAAGCTGCGAGTTCGGATTGCCACCCAAGTTCACAGTTGAGGATAANCNCCCAA 470
consensus_9791#2      AGAGAGAAAGCTGCGAGTTCGGATTG----------------------GTAATTACTCAA 315
                      **************************                       ***      **

consensus_9791#0      GCTAATA-TCGTTGAAACGAGATATCAAGAG--CAGCTTCATGTTTCTTCAGAAGTTT-T 1525
consensus_9791#1      GCTAATA-TCGTTGAAACGAGATATCCACAGACCAGCTTCATGTTTCTTCAGAAGTTTGN 529
consensus_9791#2      ATTCATAGTAGTTTACATGTGGCCTTTTTGT----CTGTCCTTTTTCCCCTGTATACTGG 371
                        * *** * *** * * * *   *             ** * ****  * * *   *  

consensus_9791#0      GACACCA--GAGTTGAATAGTATTTTTGATCTTAGCACTGCCGTTAC-GAGTGCTGTGAT 1582
consensus_9791#1      GACNCCCACGAGTTGAATAGTATTTTTGATCTTAGCCCTNCCGTTACCGAGTGCTGTGAT 589
consensus_9791#2      GGCGAAA--TGCTTGTGTAACTCTTACATTCTGAATTTTTCAAT-----ATTACCGGCAT 424
                      * *         ***  **    **    *** *    * *  *     * * * *  **

consensus_9791#0      ATCTGTATCTGTACACAGATGTAAACTACTCGATCCTGCGCCACACTGTAATGCTGTGAT 1642
consensus_9791#1      ATCTGTATCTGTACCCAGATGTAAACTACTCGATCCNGCGCCCCCCTGTAATCCTGTGAT 649
consensus_9791#2      ATCTATATGTTTTGTCAAAAAAA------------------------------------- 447
                      **** *** * *   ** *   *                                     

consensus_9791#0      GTTG-TCTTCCCATAAAGGTGAAATG-ATTCTAAGTT------------ 1677
consensus_9791#1      GTTGGTCTTCCCATAAAGGTGAAATGGATTCTAAGTTTATGGAGCCCCA 698
consensus_9791#2      -------------------------------------------------