cluster # 9805

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Oryza sativa
cluster # 9805 cluster # 9805 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9805#0 length = 1379 sequences # 6
consensusID : consensus_9805#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1379
fasta sequence
                              [CTGACGGTCGCGCACTCGCACTCGCACCGCACCAACATGGACTACGGCGCCGCCGCCTCTCACGCCGCCGCCGCGGGGCCGCCGCCGGCGGCGGATCCCCACCACCCGCACTACCCTCACCCCTACGCCGGCTACCCTTACCCCTACGCGGCGTACAACCCGGCCGCCCCCGCCTCGGAGCCCGCCACCGCCGCCTCATCCTCCTACTACTACCCCACCGCGGTCTCCGCCGCCGCCTCTGCCGGCCAGTACGACCCCTACGCGGCGTACCAGTACTACGCTGACCCCGCCGCGGCCGGGCCAGGCAGCGGCGGCGCCGGGGGCCTGCCGGGGTACTACTTCGGCGCCGGTGAGGCGTTTCAGGCCCCGGCATCGTCGGCGTCGCAGGGTGCTCCGGCGGCTACCGCGGCGGCTGGCAAGGAGGCCGGGAAGCACTTTGGGTTCGATCCTCAGCGCTACGCGCAGGCAGCAGCCGCCAGATCTTCGAATGGAGTGGCACCAGCAATTGCAGCCCCAGGCATGCACCCTGCTCAGTGGAATGCCCATTTCGGGCATCCTGTGCCGAAAATTGTTTCAAGAAAGCATATAAAGAAAAAGCCAAAGGTTGTGCAACCATTGACTTGTGAAGTTTGCAAGATTCAGTGCGATACTCCAGAAGTTCTAAGGATCCATAAGACGGGA-AAGAAGCACAAGAAAAACTTAGAGAGGCTACAAGACTCTATCACACCTAAACCAGTAAAGCCTCCAAGTACTCCAAACACTGTTGCTCTTGCAGCAAATATGGCACCTGATCCTGTCACTACTAGTGTCACTACCAGTGTGATTCCTGCTGCACAAACGAAGAAGAAGAAGAGTGCTGCAGCAACCCCAGAGGAACTGGAGGTGAAGAGGAGGCGTGTACTTGACGCTGGAGCAGCTCAAGGAGAAGTGAAAATATGTACCGTGTGCAATGTGGTCGTCAACAGCCAGAAAGTTTATGAGTTTCACATAATTGGTCAGAAGCATAAGGCCATGGTACAGAAACAGCAAGCGCAGCCACCTATAGCCTGAGGTGGAAAGCAACTATGCTTGCTCATTTTTCTCCGGTTCTATTTTGTTGCAACAGAGAACAGAATGCACAAGCTCCTGTACTCCTAATGAATGTAACTTAGCTAAACTGCTTGAAGATTATTTGGGCTCTTTGTGCCTGCCGCAGATAAGTAGTCGGAGTTTGGAGCGAAGGTTGTCTTGTGCCTGTCTTCCAGTTGTTTATTGACCAATCCAAGATTGCAGAATGTTGCCCTCGCTATGTGAATTTAGCCCTGTTGTTTAATGACAAAACGTCAATTCGAAATTGTATATTTCACCGTCGGATGATACTCCCTTTGTTCAAGAATGTG]

[+] EMBL AK066144             [CTGACGGTCGCGCACTCGCACTCGCACCGCACCAACATGGACTACGGCGCCGCCGCCTCTCACGCCGCCGCCGCGGGGCCGCCGCCGGCGGCGGATCCCCACCACCCGCACTACCCTCACCCCTACGCCGGCTACCCTTACCCCTACGCGGCGTACAACCCGGCCGCCCCCGCCTCGGAGCCCGCCACCGCCGCCTCATCCTCCTACTACTACCCCACCGCGGTCTCCGCCGCCGCCTCTGCCGGCCAGTACGACCCCTACGCGGCGTACCAGTACTACGCTGACCCCGCCGCGGCCGGGCCAGGCAGCGGCGGCGCCGGGGGCCTGCCGGGGTACTACTTCGGCGCCGGTGAGGCGTTTCAGGCCCCGGCATCGTCGGCGTCGCAGGGTGCTCCGGCGGCTACCGCGGCGGCTGGCAAGGAGGCCGGGAAGCACTTTGGGTTCGATCCTCAGCGCTACGCGCAGGCAGCAGCCGCCAGATCTTCGAATTGAGTGGCACCAGCAATTGCAGCCCCAGGCATGCACCCTGCTCAGTGGAATGCCCATTTCGGGCATCCTGTGCCGAAAATTGTTTCAAGAAAGCATATAAAGAAAAAGCCAAAGGTTGTGCAACCATTGACTTGTGAAGTTTGCAAGATTCAGTGCGATACTCCAGAAGTTCTAAGGATCCATAAGACGGGA AAGAAGCACAAGAAAAACTTAGAGAGGCTACAAGACTCTATCACACCTAAACCAGTAAAGCCTCCAAGTACTCCAAACACTGTTGCTCTTGCAGCAAATATGGCACCTGATCCTGTCACTACTAGTGTCACTACCAGTGTGATTCCTGCTGCACAAACGAAGAAGAAGAAGAGTGCTGCAGCAACCCCAGAGGAACTGGAGGTGAAGAGGAGGCGTGTACTTGACGCTGGAGCAGCTCAAGGAGAAGTGAAAATATGTACCGTGTGCAATGTGGTCGTCAACAGCCAGAAAGTTTATGAGTTTCACATAATTGGTCAGAAGCATAAGGCCATGGTACAGAAACAGCAAGCGCAGCCACCTATAGCCTGAGGTGGAAAGCAACTATGCTTGCTCATTTTTCTCCGGTTCTATTTTGTTGCAACAGAGAACAGAATGCACAAGCTCCTGTACTCCTAATGAATGTAACTTAGCTAAACTGCTTGAAGATTATTTGGGCTCTTTGTGCCTGCCGCAGATAAGTAGTCGGAGTTTGGAGCGAAGGTTGTCTTGTGCCTGTCTTCCAGTTGTTTATTGACCAATCCAAGATTGCAGAATGTTGCCCTCGCTATGTGAATTTAGCCCTGTTGTTTAATGACAAAACGTCAATTCGAAATTGTATATTTCACCGTCGGATGATACTCCCTTTGTTCAAGAA    ]
[+] EMBL AK058350             [               TCGCACTCGCACCGCACCAACACGGACTACGGCGCCGCCGCCTCTCACGCCGCCGCCGCGGGGCCGCCGCCGGCGGCGGATCCCCACCACCCGCACTACCCTCACCCCTACGCCGGCTACCCTTACCCCTACGCGGCGTACAACCCGGCCGCCCCCGCCTCGGAGCCCGCCACCGCCGCCTCATCCTCCTACTACTACCCCACCGCGGTCTCCGCCGCCGCCTCTGCCGGCCAGTACGACCCCTACGCGGCGTACCAGTACTACGCTGACCCCGCCGCGGCCGGGCCAGGCAGCGGCGGCGCCGGGGGCCTGCCGGGGTACTACTTCGGCGCCGGTGAGGCGTTTCAGGCCCCGGCATCGTCGGCGTCGCAGGGTGCTCCGGCGGCTACCGCGGCGGCTGGCAAGGAGGCCGGGAAGCACTTTGGGTTCGATCCTCAGCGCTACGCGCAGGCAGCAGCCGCCAGATCTTCGAATGGAGTGGCACCAGCAATTGCAGCCCCAGGCATGCACCCTGCTCAGTGGAATGCCCATTTCGGGCATCCTGTGCCGAAAATTGTTTCAGGAAAGCATATAAAGAAAAAGCCAAAGGTTGTGCAACCATTGACTTGTGAAGTTTGCAAGATTCAGTGCGATACTCCAGAAGTTCTAAGGATCCATAAGACGGGA AAGAAGCACAAGAAAAACTTAGAGAGGCTACAAGACTCTATCACACCTAAACCAGTAAAGCCTCCAAGTACTCCAAACACTGTTGCTCTTGCAGCAAATATGGCACCTGATCCTGTCACTACTAGTGTCACTACCAGTGTGATTCCTGCTGCACAAACGAAGAAGAAGAAGAGTGCTGCAGCAACCCCAGAGGAACTGGAGGTGAAGAGGAGGCGTGTACTTGACGCTGGAGCAGCTCAAGGAGAAGTGAAAATATGTACCGTGTGCAATGTGGTCGTCAACAGCCAGAAAGTTTATGAGTTTCACATAATTGGTCAGAAGCATAAGGCCATGGTACAGAAACAGCAAGCGCAGCCACCTATAGCCTGAGGTGGAAAGCAACTATGCTTGCTCATTTTTCTCCGGTTCTATTTTGTTGCAACAGAGAACAGAATGCACAAGCTCCTGTACTCCTAATGAATGTAACTTAGCTAAACTGCTTGAAGATTATTTGGGCTCTTTGTGCCTGCCGCAGATAAGTAGTCGGAGTTTGGAGCGAAGGTTGTCTTGTGCCTGTCTTCCAGTTGTTTATTGACCAATCCAAGATTGCAGAATGTTGCCCTCGCTATGTGAATTTAGCCCTGTTGTTTAATGACAAAACGTCAATTCGAAATTGTATATTTCACCGTCGGATGATACTCCCTTTGTTCAAGAATGTG]
[+] EMBL BP184370             [                                                                                                                                                TACGCGGCNTAAAACCCGGCCGCCCCCGCCTCGGAGCCCGCCACCGCCGCCTCATCCTCCTACTACTACCCCACCGCGGTCTCCGCCGCCGCCTCTGCCGGCCAGTACGACCCCTACGCGGCGTACCAGTACTACGCTGACCCCGCCGCGGCCGGGCCAGGCAGCGGCGGCGCCGGGGGCCTGCCGGGGTACTACTTCGGCGCCGGTGAGGCGTTTCAGGCCCCGGCATCGTCGGCGTCGCAGGGTGCTCCGGCGGCTACCGCGGCGGCTGGCAAGGAGGCCGGGAAGCACTTTGGGTTCGATCCTCAGCGCTACGCGCAGGCAGCAGCCGCCAGATCTTCGAATGGAGTGGCACCAGCAATTGCAGCCCCAGGCATGCACCCTGCTCAGTGGAATGCCCATTTCGGGCATCCTGTGCCGAAAATTGTTTCAAGAAAGCATATAAAGAAAAAGCCAAAGGTTGTGCAACCATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BP184371             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCATAAGACGGGA AAGAAGCACAAGAAAAACTTAGAGAGGCTACAAGACTCTATCACACCTAAACCAGTAAAGCCTCCAAGTACTCCAAACACTGTTGCTCTTGCAGCAAATATGGCACCTGATCCTGTCACTACTAGTGTCACTACCAGTGTGATTCCTGCTGCACAAACGAAGAAGAAGAAGAGTGCTGCAGCAACCCCAGAGGAACTGGAGGTGAAGAGGAGGCGTGTACCTGACGCTGGAGCAGCTCAAGGAGAAGTGAAAATATGTACCGTGTGCAATGTGGTCGTCAACAGCCAGAAAGTTTATGAGTTTCACATAATTGGTCAGAAGCATAAGGCCATGGTACAGAAACAGCAAGCGCAGCCACCTATAGCCTGAGGTGGAAAGCAACTATGCTTGCTCATTTTTCTCCGGTTCTATTTTGTTGCAACAGAGAACAGAATGCACAAGCTCCTGTACTCCTAATGAATGTAACTTAGCTAAACTGCTTGAAGATTATTTGGGCTCTTTGTGCCTGCCGCAGATAAGTAGTCGGAGTTTGGAGCGAAGGTTGTCTTGTGCCTGTCTTCCAGTTGTTTATTGACCAATCCAAGATTGCAGAATGTTGCCCTCGCTATGTGAATTTAGCCCTGTTGTTTAATGACAAAACGTCAATTCGAAATTGTATATTTCACCGTaaaaa                         ]
[-] EMBL CA759100             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGA GAGACAAGGGGCACAAGAAAAACTTAGAGAGGCTACAAGACTCTATCACACCTAAACCAGTAGAGCCTCCAAGTACTCCAAACACTGTTGCTCTTGCAGCAAATATGGCACCTGATCCTGTCACTACTAGTGTCACTACCAGTGTGATGCCTGCTGCACAAACGAAGAAGAAGAAGAGTGCTGCAGCAACCCCAGAGGAACTGGAGGTGAAGAGGAGGCGTGTACTTGACGCTGGAGCAGCTCAAGGAGAAGTGAAAATATGTACCGTGTGCAATGTGGTCGTCAACAGCCAGAAAGTTTATGAGTTTCACATAATTGGTCAGAAGCATAAGGCCATGGTACAGAAACACCAAGCGCAGCCACCTATAGCCTGAGGTGGAAAGCAACTATGCTTGCTCATTTTTCTCCGGTTCTATTTTGTTGCAACAGAGAACAGAATGCACAAGCTCCTGTACTCCTAATGAATGTAACTTAGCTAAACTGCTTGAAGATTATTTGGGCTCTTTGTGCCTGCCGCAAAAAAaaaa                                                                                                                                                                                ]
[+] EMBL CA766954             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GCACAAGAAAAACTTAGAGAGGCTACAAGACTCTATCACACCTAAACCAGTAGAGCCTCCAAGTACTCCAAACACTGTTGCTCTTGCAGCAAATATGGCACCTGATCCTGTCACTACTAGTGTCACTACCAGTGTGATGCCTGCTGCACAAACGAAGAAGAAGAAGAGTGCTGCAGCAACCCCAGAGGAACTGGAGGTGAAGAGGAGGCGTGTACTTGACGCTGGAGCAGCTCAAGGAGAAGTGAAAATATGTACCGTGTGCAATGTGGTCGTCAACAGCCAGAAAGTTTATGAGTTTCACATAATTGGTCAGAAGCATAAGGCCATGGTACAGAAACACCAAGCGCAGCCACCTATAGCCTGAGGTGGAAAGCAACTATGCTTGCTCATTTTTCTCCGGTTCTATTTTGTTGCAACAGAGAACAGAATGCACAAGCTCCTGTACTCCTAATGAATGTAACTTAGCTAAACTGCTTGAAGATTATTTGGGCTCTTTGTGC                                                                                                                                                                                                 ]




>consensus_9805#0
CTGACGGTCGCGCACTCGCACTCGCACCGCACCAACATGGACTACGGCGCCGCCGCCTCT
CACGCCGCCGCCGCGGGGCCGCCGCCGGCGGCGGATCCCCACCACCCGCACTACCCTCAC
CCCTACGCCGGCTACCCTTACCCCTACGCGGCGTACAACCCGGCCGCCCCCGCCTCGGAG
CCCGCCACCGCCGCCTCATCCTCCTACTACTACCCCACCGCGGTCTCCGCCGCCGCCTCT
GCCGGCCAGTACGACCCCTACGCGGCGTACCAGTACTACGCTGACCCCGCCGCGGCCGGG
CCAGGCAGCGGCGGCGCCGGGGGCCTGCCGGGGTACTACTTCGGCGCCGGTGAGGCGTTT
CAGGCCCCGGCATCGTCGGCGTCGCAGGGTGCTCCGGCGGCTACCGCGGCGGCTGGCAAG
GAGGCCGGGAAGCACTTTGGGTTCGATCCTCAGCGCTACGCGCAGGCAGCAGCCGCCAGA
TCTTCGAATGGAGTGGCACCAGCAATTGCAGCCCCAGGCATGCACCCTGCTCAGTGGAAT
GCCCATTTCGGGCATCCTGTGCCGAAAATTGTTTCAAGAAAGCATATAAAGAAAAAGCCA
AAGGTTGTGCAACCATTGACTTGTGAAGTTTGCAAGATTCAGTGCGATACTCCAGAAGTT
CTAAGGATCCATAAGACGGGAAAGAAGCACAAGAAAAACTTAGAGAGGCTACAAGACTCT
ATCACACCTAAACCAGTAAAGCCTCCAAGTACTCCAAACACTGTTGCTCTTGCAGCAAAT
ATGGCACCTGATCCTGTCACTACTAGTGTCACTACCAGTGTGATTCCTGCTGCACAAACG
AAGAAGAAGAAGAGTGCTGCAGCAACCCCAGAGGAACTGGAGGTGAAGAGGAGGCGTGTA
CTTGACGCTGGAGCAGCTCAAGGAGAAGTGAAAATATGTACCGTGTGCAATGTGGTCGTC
AACAGCCAGAAAGTTTATGAGTTTCACATAATTGGTCAGAAGCATAAGGCCATGGTACAG
AAACAGCAAGCGCAGCCACCTATAGCCTGAGGTGGAAAGCAACTATGCTTGCTCATTTTT
CTCCGGTTCTATTTTGTTGCAACAGAGAACAGAATGCACAAGCTCCTGTACTCCTAATGA
ATGTAACTTAGCTAAACTGCTTGAAGATTATTTGGGCTCTTTGTGCCTGCCGCAGATAAG
TAGTCGGAGTTTGGAGCGAAGGTTGTCTTGTGCCTGTCTTCCAGTTGTTTATTGACCAAT
CCAAGATTGCAGAATGTTGCCCTCGCTATGTGAATTTAGCCCTGTTGTTTAATGACAAAA
CGTCAATTCGAAATTGTATATTTCACCGTCGGATGATACTCCCTTTGTTCAAGAATGTG
clustalw multiple alignements is not computed in this case