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Oryza sativa
cluster # 9809 cluster # 9809       Sequences # 6       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9809#0 length = 2070 sequences # 1  
 consensus_9809#1 length = 1507 sequences # 4  
consensus_9809#2 length = 487 sequences # 1  
consensusID : consensus_9809#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2070
fasta sequence 
                              [ACCGAGATCCCCAACCCAACCCAAGCCGCGATGATCCTCCGCATCCGCAGCCGCGACGGCACGGACCGCATCACCGTGCCGGACCCGGCCGCCGCCACCGTCGGCGACCTGCAGCGTCTCATCGCGGCGCGCGTCACCGTCCCCGTCCCGCTCCAGCGCCTCTCCCTCGACCCGGCGCTCCTCCTCCCCTCCTCCGCCTCCGCCGCCCTGCTCGCCGACCCGGCCGCCCCGCTCTCCTCCCTCCGCCTCTCCAATGGCTCCTTCGTCTACCTCTCCTACCCGCCCGACGCCCGCTCCTCCCAGCCGCCTCCCCCCAAAGCCCTCTCCGCCGCCGGCTCCTTCGGCAAGAAGATGACCATGGACGACCTCATCGCGCGCCAGATCCGCGTCACCCGGCAGGAGGCCCCGCTCTGCGCCGCCGCCTCCTTCGACCGCGACTCCGCCAACGCCTTCCAGCTCCACGTCGCCGAGTCGCTCGCCTTCGCTACCAAGCGCGCCGGCTTCCTCTACGGCCGCGTCGACGCCGACACCAAGGAGGTCTTCGTCGATTTCATCTACGAGCCGCCGCAGGTCGGCACCGAGGACGTTGTCCAGCTCATGCGGGACGCGCAGGAGGAGGCCCGCGTCGACGCCATCGCCCACGGCCTCGGGATGCGCCGCGTCGGCCTGGTGTTCACGCAGGCAGTCGGGAGGAAGACCAGCGACACTGGCGAGTACACCATGTCCAACCGCGAGGTGCTTCAGGCCACCGAGCTGCAGGCGGAGGGCGGGATCCCGGAGTGGGTCACCGCCATAGTCAAGCTCGAGGTGGGGGATGATGGCTCCGGTGATGTGCACTTCGAGGCGTTCCAGATGAGTGAGATTTGTGTGAAGCTGTTCAAGGATGGTGTGCTGGAGACGGAGATTGGGGACAAAGACGATCCCCGCCTGTCCAAGATGCGGAAAGAGGTGGTGGCTGGGGGAAAGGATACTATGGAGGTGGACAATGACTTCTTCCTGGTGCCTGTCAAGATCTCTGATCATCAGGTATTCTTATTCTTTCCTACTCTGTTGCATAGTATAATGAACTTACAGTTTACTAAATAAGTTTGCTTCCTACAACATAGCAATATTAACACTTGACTGGGTAGCAGCATGTTTGAAACCTTGAATCATCAGGTGATCTGAGTGGGTGCTCGTTTTAGTAATTTGATGTAAAACTGACAATGAAACAACATAATGGTCAGCGAACAAGGTAGATATGCCGCATGAATTAGAAATAAAAATCTCCCAATACAAGAGAAGAATTAGAGCCTTTGTGTTATCCACTAAATAGTAGAGTGCCTATTTGCATGCAAGCAATTAATTCATGACATATTTATTTTCTGCAAAGTCATTATGTTTCTGTTAATTTTTTGATTCAAACTTCGTAGAGGGCCTCCTGCACTGTCTTGAAAAACTGAATCTCTGGGTGTAAGGGCATGATATATGAGTTCTGTTCAGTGTTAGACTGTTAGTAAACAGCCATCCACAAATATTCATAATTCTAGTAATAATAGATCCACTTTTGAGAAGTAATTAACCACTATATAAGAAAAGGAGTATGTGTAGAAAAATTCAGGCATTTTGGCACATTTTTTGAAGACCTACTGATTTAAGTAACTGTTTCAAGAACGTAAAGATATAGTTACTCTTATGTTCCATAGAACTACAAGTTTTTAACTACTTGTTCAAACCACTTGCAGACACACAAAGGCCCTGTTCTATGACATGCAGCACACATTTTTGTTATTTGGCATGGAACAGGACAAAGCCTTGTGTTTGTCAGGAAGTGTTGCCAAAATGTTGTAGCTGTTGCAAACTTAGCAATGAGATCTGTGGTTTTTTGATAGATATGCCAAAATATCTATAGTGTTTGTGAAATTTACTCTAGAAAAGAGCATCTTATTTCAGTGATGCATCCTAGTTCATAGAGCTGATCTAGATGAGAATGAATCTGTGAATGACGATTCTTGATATCTATGCAACTGATATCATGAATTTGATGTGATTCCATTTAATTTATTTCAAGAGCAGAATCAATGGGTGATT]

[+] EMBL AK107503             [ACCGAGATCCCCAACCCAACCCAAGCCGCGATGATCCTCCGCATCCGCAGCCGCGACGGCACGGACCGCATCACCGTGCCGGACCCGGCCGCCGCCACCGTCGGCGACCTGCAGCGTCTCATCGCGGCGCGCGTCACCGTCCCCGTCCCGCTCCAGCGCCTCTCCCTCGACCCGGCGCTCCTCCTCCCCTCCTCCGCCTCCGCCGCCCTGCTCGCCGACCCGGCCGCCCCGCTCTCCTCCCTCCGCCTCTCCAATGGCTCCTTCGTCTACCTCTCCTACCCGCCCGACGCCCGCTCCTCCCAGCCGCCTCCCCCCAAAGCCCTCTCCGCCGCCGGCTCCTTCGGCAAGAAGATGACCATGGACGACCTCATCGCGCGCCAGATCCGCGTCACCCGGCAGGAGGCCCCGCTCTGCGCCGCCGCCTCCTTCGACCGCGACTCCGCCAACGCCTTCCAGCTCCACGTCGCCGAGTCGCTCGCCTTCGCTACCAAGCGCGCCGGCTTCCTCTACGGCCGCGTCGACGCCGACACCAAGGAGGTCTTCGTCGATTTCATCTACGAGCCGCCGCAGGTCGGCACCGAGGACGTTGTCCAGCTCATGCGGGACGCGCAGGAGGAGGCCCGCGTCGACGCCATCGCCCACGGCCTCGGGATGCGCCGCGTCGGCCTGGTGTTCACGCAGGCAGTCGGGAGGAAGACCAGCGACACTGGCGAGTACACCATGTCCAACCGCGAGGTGCTTCAGGCCACCGAGCTGCAGGCGGAGGGCGGGATCCCGGAGTGGGTCACCGCCATAGTCAAGCTCGAGGTGGGGGATGATGGCTCCGGTGATGTGCACTTCGAGGCGTTCCAGATGAGTGAGATTTGTGTGAAGCTGTTCAAGGATGGTGTGCTGGAGACGGAGATTGGGGACAAAGACGATCCCCGCCTGTCCAAGATGCGGAAAGAGGTGGTGGCTGGGGGAAAGGATACTATGGAGGTGGACAATGACTTCTTCCTGGTGCCTGTCAAGATCTCTGATCATCAGGTATTCTTATTCTTTCCTACTCTGTTGCATAGTATAATGAACTTACAGTTTACTAAATAAGTTTGCTTCCTACAACATAGCAATATTAACACTTGACTGGGTAGCAGCATGTTTGAAACCTTGAATCATCAGGTGATCTGAGTGGGTGCTCGTTTTAGTAATTTGATGTAAAACTGACAATGAAACAACATAATGGTCAGCGAACAAGGTAGATATGCCGCATGAATTAGAAATAAAAATCTCCCAATACAAGAGAAGAATTAGAGCCTTTGTGTTATCCACTAAATAGTAGAGTGCCTATTTGCATGCAAGCAATTAATTCATGACATATTTATTTTCTGCAAAGTCATTATGTTTCTGTTAATTTTTTGATTCAAACTTCGTAGAGGGCCTCCTGCACTGTCTTGAAAAACTGAATCTCTGGGTGTAAGGGCATGATATATGAGTTCTGTTCAGTGTTAGACTGTTAGTAAACAGCCATCCACAAATATTCATAATTCTAGTAATAATAGATCCACTTTTGAGAAGTAATTAACCACTATATAAGAAAAGGAGTATGTGTAGAAAAATTCAGGCATTTTGGCACATTTTTTGAAGACCTACTGATTTAAGTAACTGTTTCAAGAACGTAAAGATATAGTTACTCTTATGTTCCATAGAACTACAAGTTTTTAACTACTTGTTCAAACCACTTGCAGACACACAAAGGCCCTGTTCTATGACATGCAGCACACATTTTTGTTATTTGGCATGGAACAGGACAAAGCCTTGTGTTTGTCAGGAAGTGTTGCCAAAATGTTGTAGCTGTTGCAAACTTAGCAATGAGATCTGTGGTTTTTTGATAGATATGCCAAAATATCTATAGTGTTTGTGAAATTTACTCTAGAAAAGAGCATCTTATTTCAGTGATGCATCCTAGTTCATAGAGCTGATCTAGATGAGAATGAATCTGTGAATGACGATTCTTGATATCTATGCAACTGATATCATGAATTTGATGTGATTCCATTTAATTTATTTCAAGAGCAGAATCAATGGGTGATT]




>consensus_9809#0
ACCGAGATCCCCAACCCAACCCAAGCCGCGATGATCCTCCGCATCCGCAGCCGCGACGGC
ACGGACCGCATCACCGTGCCGGACCCGGCCGCCGCCACCGTCGGCGACCTGCAGCGTCTC
ATCGCGGCGCGCGTCACCGTCCCCGTCCCGCTCCAGCGCCTCTCCCTCGACCCGGCGCTC
CTCCTCCCCTCCTCCGCCTCCGCCGCCCTGCTCGCCGACCCGGCCGCCCCGCTCTCCTCC
CTCCGCCTCTCCAATGGCTCCTTCGTCTACCTCTCCTACCCGCCCGACGCCCGCTCCTCC
CAGCCGCCTCCCCCCAAAGCCCTCTCCGCCGCCGGCTCCTTCGGCAAGAAGATGACCATG
GACGACCTCATCGCGCGCCAGATCCGCGTCACCCGGCAGGAGGCCCCGCTCTGCGCCGCC
GCCTCCTTCGACCGCGACTCCGCCAACGCCTTCCAGCTCCACGTCGCCGAGTCGCTCGCC
TTCGCTACCAAGCGCGCCGGCTTCCTCTACGGCCGCGTCGACGCCGACACCAAGGAGGTC
TTCGTCGATTTCATCTACGAGCCGCCGCAGGTCGGCACCGAGGACGTTGTCCAGCTCATG
CGGGACGCGCAGGAGGAGGCCCGCGTCGACGCCATCGCCCACGGCCTCGGGATGCGCCGC
GTCGGCCTGGTGTTCACGCAGGCAGTCGGGAGGAAGACCAGCGACACTGGCGAGTACACC
ATGTCCAACCGCGAGGTGCTTCAGGCCACCGAGCTGCAGGCGGAGGGCGGGATCCCGGAG
TGGGTCACCGCCATAGTCAAGCTCGAGGTGGGGGATGATGGCTCCGGTGATGTGCACTTC
GAGGCGTTCCAGATGAGTGAGATTTGTGTGAAGCTGTTCAAGGATGGTGTGCTGGAGACG
GAGATTGGGGACAAAGACGATCCCCGCCTGTCCAAGATGCGGAAAGAGGTGGTGGCTGGG
GGAAAGGATACTATGGAGGTGGACAATGACTTCTTCCTGGTGCCTGTCAAGATCTCTGAT
CATCAGGTATTCTTATTCTTTCCTACTCTGTTGCATAGTATAATGAACTTACAGTTTACT
AAATAAGTTTGCTTCCTACAACATAGCAATATTAACACTTGACTGGGTAGCAGCATGTTT
GAAACCTTGAATCATCAGGTGATCTGAGTGGGTGCTCGTTTTAGTAATTTGATGTAAAAC
TGACAATGAAACAACATAATGGTCAGCGAACAAGGTAGATATGCCGCATGAATTAGAAAT
AAAAATCTCCCAATACAAGAGAAGAATTAGAGCCTTTGTGTTATCCACTAAATAGTAGAG
TGCCTATTTGCATGCAAGCAATTAATTCATGACATATTTATTTTCTGCAAAGTCATTATG
TTTCTGTTAATTTTTTGATTCAAACTTCGTAGAGGGCCTCCTGCACTGTCTTGAAAAACT
GAATCTCTGGGTGTAAGGGCATGATATATGAGTTCTGTTCAGTGTTAGACTGTTAGTAAA
CAGCCATCCACAAATATTCATAATTCTAGTAATAATAGATCCACTTTTGAGAAGTAATTA
ACCACTATATAAGAAAAGGAGTATGTGTAGAAAAATTCAGGCATTTTGGCACATTTTTTG
AAGACCTACTGATTTAAGTAACTGTTTCAAGAACGTAAAGATATAGTTACTCTTATGTTC
CATAGAACTACAAGTTTTTAACTACTTGTTCAAACCACTTGCAGACACACAAAGGCCCTG
TTCTATGACATGCAGCACACATTTTTGTTATTTGGCATGGAACAGGACAAAGCCTTGTGT
TTGTCAGGAAGTGTTGCCAAAATGTTGTAGCTGTTGCAAACTTAGCAATGAGATCTGTGG
TTTTTTGATAGATATGCCAAAATATCTATAGTGTTTGTGAAATTTACTCTAGAAAAGAGC
ATCTTATTTCAGTGATGCATCCTAGTTCATAGAGCTGATCTAGATGAGAATGAATCTGTG
AATGACGATTCTTGATATCTATGCAACTGATATCATGAATTTGATGTGATTCCATTTAAT
TTATTTCAAGAGCAGAATCAATGGGTGATT

consensusID : consensus_9809#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1507
fasta sequence 
                              [AAGTACCGAGATCCCCAACCCAACCCAAGCCGCGATGATCCTCCGCATCCGCAGCCGCGACGGCACGGACCGCATCACCGTGCCGGACCCGGCCGCCGCCACCGTCGGCGACCTGCAGCGTCTCATCGCGGCGCGCGTCACCGTCCCCGTCCCGCTCCAGCGCCTCTCCCTCGACCCGGCGCTCCTCCTCCCCTCCTCCGCCTCCGCCGCCCTGCTCGCCGACCCGGCCGCCCCGCTCTCCTCCCTCCGCCTCTCCAATGGCTCCTTCGTCTACCTCTCCTACCCGCCCGACGCCCGCTCCTCCCAGCCGCCTCCCCCCAAAGCCCTCTCCGCCGCCGGCTCCTTCGGCAAGAAGATGACCATGGACGACCTCATCGCGCGCCAGATCCGCGTCACCCGCCAGGAGGCCCCGCTCTGCGCCGCCGCCTCCTTCGACCGCGACTCCGCCAACGCCTTCCAGCTCCACGTCGCCGAGTCGCTCGCCTTCGCTACCAAGCGCGCCGGCTTCCTCTACGGCCGCGTCGACGCCGACACCAAGGAGGTCTTCGTCGATTTCATCTACGAGCCGCCGCAGGTCGGCACCGAGGACGTTGTCCAGCTCATGCGGGACGCGCAGGAGGAGGCCCGCGTCGACGCCATCGCCCACGGCCTCGGGATGCGCCGCGTCGGCCTGGTGTTCACGCAGGCAGTCGGGAGGAAGACCAGCGACACTGGCGAGTACACCATGTCCAACCGCGAGGTGCTTCAGGCCACCGAGCTGCAGGCGGAGGGCGGGATCCCGGAGTGGGTCACCGCCATAGTCAAGCTCGAGGTGGGGGATGATGGCTCCGGTGATGTGCACTTCGAGGCGTTCCAGATGAGTGAGATTTGTGTGAAGCTGTTCAAGGATGGTGTGCTGGAGACGGAGATTGGGGACAAAGACGATCCCCGCCTGTCCAAGATGCGGAAAGGGGTGGTGGCTGGGGGAAAGGATACTATGGAGGTGGACAATGACTTCTTCCTGGTGCCTGTCAAGATCTCTGATCATCAGGGTCCACTTTCAACCGGCTTTCCTATCGAGAACCGTGGAAACCCTGTAGCAATGAGCGCGCTCAAGAGCCA-CCTGGATCGTGCTAAGCATCTACCATTTGTTAAGCGGATCTCGGACTTCCACCTTC-TCCTCCTGGTTGCTGCTTTCCTAGACATAAAAGCAGATGTTCCTGCCCTCACCGCTTGCGTAAAGAACCAGAGCGTGGTGCCTGAAGGCTACCAACTGCTGATCGAGTCATTGGCTGGTGCCTGAAGTCTACCAG-CTG-CTGATCGAATCATTTAGCCA-GTTAGGCATAATGTTGATCTCTGGAAGCAAAGCACCTGGTCCCTTTAAATTTACTGCCATATATCATGTGTAACTTATGGTTGTCTCTGGTGTGTAAAAAAGTCTTGATCAATTCATAGGCGCTTAACTTTACACAAGCGCAACATCGTTTTTTATATGATGCTGAAGCTGTGTCTCCTTCACTTAAAAAAA]

[+] EMBL AK059266             [AAGTACCGAGATCCCCAACCCAACCCAAGCCGCGATGATCCTCCGCATCCGCAGCCGCGACGGCACGGACCGCATCACCGTGCCGGACCCGGCCGCCGCCACCGTCGGCGACCTGCAGCGTCTCATCGCGGCGCGCGTCACCGTCCCCGTCCCGCTCCAGCGCCTCTCCCTCGACCCGGCGCTCCTCCTCCCCTCCTCCGCCTCCGCCGCCCTGCTCGCCGACCCGGCCGCCCCGCTCTCCTCCCTCCGCCTCTCCAATGGCTCCTTCGTCTACCTCTCCTACCCGCCCGACGCCCGCTCCTCCCAGCCGCCTCCCCCCAAAGCCCTCTCCGCCGCCGGCTCCTTCGGCAAGAAGATGACCATGGACGACCTCATCGCGCGCCAGATCCGCGTCACCCGCCAGGAGGCCCCGCTCTGCGCCGCCGCCTCCTTCGACCGCGACTCCGCCAACGCCTTCCAGCTCCACGTCGCCGAGTCGCTCGCCTTCGCTACCAAGCGCGCCGGCTTCCTCTACGGCCGCGTCGACGCCGACACCAAGGAGGTCTTCGTCGATTTCATCTACGAGCCGCCGCAGGTCGGCACCGAGGACGTTGTCCAGCTCATGCGGGACGCGCAGGAGGAGGCCCGCGTCGACGCCATCGCCCACGGCCTCGGGATGCGCCGCGTCGGCCTGGTGTTCACGCAGGCAGTCGGGAGGAAGACCAGCGACACTGGCGAGTACACCATGTCCAACCGCGAGGTGCTTCAGGCCACCGAGCTGCAGGCGGAGGGCGGGATCCCGGAGTGGGTCACCGCCATAGTCAAGCTCGAGGTGGGGGATGATGGCTCCGGTGATGTGCACTTCGAGGCGTTCCAGATGAGTGAGATTTGTGTGAAGCTGTTCAAGGATGGTGTGCTGGAGACGGAGATTGGGGACAAAGACGATCCCCGCCTGTCCAAGATGCGGAAAGGGGTGGTGGCTGGGGGAAAGGATACTATGGAGGTGGACAATGACTTCTTCCTGGTGCCTGTCAAGATCTCTGATCATCAGGGTCCACTTTCAACCGGCTTTCCTATCGAGAACCGTGGAAACCCTGTAGCAATGAGCGCGCTCAAGAGCCA CCTGGATCGTGCTAAGCATCTACCATTTGTTAAGCGGATCTCGGACTTCCACCTTC TCCTCCTGGTTGCTGCTTTCCTAGACATAAAAGCAGATGTTCCTGCCCTCACCGCTTGCGTAAAGAACCAGAGCGTGGTGCCTGAAGGCTACCAACTGCTGATCGAGTCATTGGCTGGTGCCTGAAGTCTACCAG CTG CTGATCGAATCATTTAGCCA GTTAGGCATAATGTTGATCTCTGGAAGCAAAGCACCTGGTCCCTTTAAATTTACTGCCATATATCATGTGTAACTTATGGTTGTCTCTGGTGTGTAAAAAAGTCTTGATCAATTCATAGGCGCTTAACTTTACACAAGCGCAAC                                                ]
[+] EMBL C72557               [                           AGCCGCGATGATCCTCCGCATCCGCAGCCGCGACGGCACGGACAGCATCACCGTGCNGGACACGGCCGCCGCCACCGTCGGCGACCTGCAGCGTCTCATCGCGGCG GCGTCACCGTCCCCGTCCCGCTCCAGCGCCTCTCCCTCGACCCGGCGCTCCTCCTCCNCTCCTCCGCCTCCGCCGCCCTGCTCGCCGACCCGGACGCCCCGCTCTCCTCCCTCCGNCTCTCCAATGGCTCCTTCGTCTACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C74672               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTTCTTCCTGGTGCCTGTCAAGATCTCTGATCATCAGGGTCCACTTTCAACCGGCTTTCCTATCGAGAACCGTGGAAACCCTGTAGCAATGAGCGCGCTCAAGAGCCA CCTGGATCGTGCTAAGCATCTACCATTTGTTAAGCGGATCTCGGACTTCCACCTTC TCCTCCTGGTTGCTGCTTTCCTAGACATAAAAGCAGATGTTCCTGCCCTCACCGCTTGCGTAAAGAACCAGAGCGTGGTGCCTGAAGGCTACCAACTGCTGATCGAGTCATTGGCTGGTGCCTGAAGTCTACCAG CTG CTGATCGAATCATTTAGCCA GTTAGGCATAATGTTGATCTCTGGAAGCAAAGCACCTGGTCCCTTTAAATTTACTGCCATATATCATGTGTAACTTATGGTTGTCTCTGGTGTGTAAAAAAGTCTTGATCAATTCATAGGCGCTTAA                                                                 ]
[+] EMBL BQ907403             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AAGATCTCTGATCACCAGGGTCCACTTTCAACCGGCTTTCCTATCGAGAACCGTGGAAACCCTGTAGC ATGAGCGCGCTCAAGAGCCACCCTGGATCGTGCTAAGCATCTACCATTTGTTAAGCGGATCTCGGACTTCCACCTTCGTCCTCCTGGTTGCTGCTTTCTTAGACATAAAAGCAGATGTTCCTGCCCTCACCGCTTGCGTAAAGAACCAGAGCGTGGTGCCTGAAGGCTACCAACTGCTGATCGAGTCATTGGCTGGTGCCTGAAGTCTACCAGCCTGCCTGATCGA  C  TTGGCCACGTTAGGCATAATGCTGATCTCTGGAAGC AAGCACCTGGTCCCTTTAAATTTACTGGCATATATCATGTGTAACTTATGGTTGTCTCTGGTGTGTAAAAAAGTCTTGATCAATTCATAGGCGCTTAACTTTACACAAGCGCAACATCGTTTTTTATATGATGCTGAAGCTGTGTCTCCTTCACTTAAAAAAA]




>consensus_9809#1
AAGTACCGAGATCCCCAACCCAACCCAAGCCGCGATGATCCTCCGCATCCGCAGCCGCGA
CGGCACGGACCGCATCACCGTGCCGGACCCGGCCGCCGCCACCGTCGGCGACCTGCAGCG
TCTCATCGCGGCGCGCGTCACCGTCCCCGTCCCGCTCCAGCGCCTCTCCCTCGACCCGGC
GCTCCTCCTCCCCTCCTCCGCCTCCGCCGCCCTGCTCGCCGACCCGGCCGCCCCGCTCTC
CTCCCTCCGCCTCTCCAATGGCTCCTTCGTCTACCTCTCCTACCCGCCCGACGCCCGCTC
CTCCCAGCCGCCTCCCCCCAAAGCCCTCTCCGCCGCCGGCTCCTTCGGCAAGAAGATGAC
CATGGACGACCTCATCGCGCGCCAGATCCGCGTCACCCGCCAGGAGGCCCCGCTCTGCGC
CGCCGCCTCCTTCGACCGCGACTCCGCCAACGCCTTCCAGCTCCACGTCGCCGAGTCGCT
CGCCTTCGCTACCAAGCGCGCCGGCTTCCTCTACGGCCGCGTCGACGCCGACACCAAGGA
GGTCTTCGTCGATTTCATCTACGAGCCGCCGCAGGTCGGCACCGAGGACGTTGTCCAGCT
CATGCGGGACGCGCAGGAGGAGGCCCGCGTCGACGCCATCGCCCACGGCCTCGGGATGCG
CCGCGTCGGCCTGGTGTTCACGCAGGCAGTCGGGAGGAAGACCAGCGACACTGGCGAGTA
CACCATGTCCAACCGCGAGGTGCTTCAGGCCACCGAGCTGCAGGCGGAGGGCGGGATCCC
GGAGTGGGTCACCGCCATAGTCAAGCTCGAGGTGGGGGATGATGGCTCCGGTGATGTGCA
CTTCGAGGCGTTCCAGATGAGTGAGATTTGTGTGAAGCTGTTCAAGGATGGTGTGCTGGA
GACGGAGATTGGGGACAAAGACGATCCCCGCCTGTCCAAGATGCGGAAAGGGGTGGTGGC
TGGGGGAAAGGATACTATGGAGGTGGACAATGACTTCTTCCTGGTGCCTGTCAAGATCTC
TGATCATCAGGGTCCACTTTCAACCGGCTTTCCTATCGAGAACCGTGGAAACCCTGTAGC
AATGAGCGCGCTCAAGAGCCACCTGGATCGTGCTAAGCATCTACCATTTGTTAAGCGGAT
CTCGGACTTCCACCTTCTCCTCCTGGTTGCTGCTTTCCTAGACATAAAAGCAGATGTTCC
TGCCCTCACCGCTTGCGTAAAGAACCAGAGCGTGGTGCCTGAAGGCTACCAACTGCTGAT
CGAGTCATTGGCTGGTGCCTGAAGTCTACCAGCTGCTGATCGAATCATTTAGCCAGTTAG
GCATAATGTTGATCTCTGGAAGCAAAGCACCTGGTCCCTTTAAATTTACTGCCATATATC
ATGTGTAACTTATGGTTGTCTCTGGTGTGTAAAAAAGTCTTGATCAATTCATAGGCGCTT
AACTTTACACAAGCGCAACATCGTTTTTTATATGATGCTGAAGCTGTGTCTCCTTCACTT
AAAAAAA

consensusID : consensus_9809#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 487
fasta sequence 
                              [GGGTGCCACTGTGTGCAACCGGGCTGTTGCCCTGATGNCGGAGAACCCGTGGGAAACCCTGGTGAGCAATGAGCGCGGCTGTCAAGAGCCACTGGGATGCGTGGCTGAAGCATGCTGGACCTATGTTGGTTAAAGCTGGATGCTCGGACTGTGCCACCTGTGCTGCCTGCCTGGGGTTGGCTGGGCTGTTGCTTAGACATAAAAGCAGATGTTCCTGCCCTCACCGCTTGCGTAAAGAACCAGAGCGTGGTGCCNGGAAGGCTACCAACTGCTGGATCGAGTCATTGGGCTGGGTGCCTGAAGTCTACCAGCTGCTGATCGACTTGGCCAGTTAGGCATAATGCTGATCTCTGGAAGCAAAGCACCTGGTCCCTTNAAATTTACTGGGCANTATATCATGTGTAACTTATGTTTGTCTCTGGTGTGTAAAAAAGTCTNGATCAATTCATAGGCGCTTAACTTACCCACAGCGCAACATCGTTTTTTA]

[+] EMBL BQ906154             [GGGTGCCACTGTGTGCAACCGGGCTGTTGCCCTGATGNCGGAGAACCCGTGGGAAACCCTGGTGAGCAATGAGCGCGGCTGTCAAGAGCCACTGGGATGCGTGGCTGAAGCATGCTGGACCTATGTTGGTTAAAGCTGGATGCTCGGACTGTGCCACCTGTGCTGCCTGCCTGGGGTTGGCTGGGCTGTTGCTTAGACATAAAAGCAGATGTTCCTGCCCTCACCGCTTGCGTAAAGAACCAGAGCGTGGTGCCNGGAAGGCTACCAACTGCTGGATCGAGTCATTGGGCTGGGTGCCTGAAGTCTACCAGCTGCTGATCGACTTGGCCAGTTAGGCATAATGCTGATCTCTGGAAGCAAAGCACCTGGTCCCTTNAAATTTACTGGGCANTATATCATGTGTAACTTATGTTTGTCTCTGGTGTGTAAAAAAGTCTNGATCAATTCATAGGCGCTTAACTTACCCACAGCGCAACATCGTTTTTTA]




>consensus_9809#2
GGGTGCCACTGTGTGCAACCGGGCTGTTGCCCTGATGNCGGAGAACCCGTGGGAAACCCT
GGTGAGCAATGAGCGCGGCTGTCAAGAGCCACTGGGATGCGTGGCTGAAGCATGCTGGAC
CTATGTTGGTTAAAGCTGGATGCTCGGACTGTGCCACCTGTGCTGCCTGCCTGGGGTTGG
CTGGGCTGTTGCTTAGACATAAAAGCAGATGTTCCTGCCCTCACCGCTTGCGTAAAGAAC
CAGAGCGTGGTGCCNGGAAGGCTACCAACTGCTGGATCGAGTCATTGGGCTGGGTGCCTG
AAGTCTACCAGCTGCTGATCGACTTGGCCAGTTAGGCATAATGCTGATCTCTGGAAGCAA
AGCACCTGGTCCCTTNAAATTTACTGGGCANTATATCATGTGTAACTTATGTTTGTCTCT
GGTGTGTAAAAAAGTCTNGATCAATTCATAGGCGCTTAACTTACCCACAGCGCAACATCG
TTTTTTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9809#1      AAGTACCGAGATCCCCAACCCAACCCAAGCCGCGATGATCCTCCGCATCCGCAGCCGCGA 60
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      ------------------------------------------------------------
                                                                                  

consensus_9809#1      CGGCACGGACCGCATCACCGTGCCGGACCCGGCCGCCGCCACCGTCGGCGACCTGCAGCG 120
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      ------------------------------------------------------------
                                                                                  

consensus_9809#1      TCTCATCGCGGCGCGCGTCACCGTCCCCGTCCCGCTCCAGCGCCTCTCCCTCGACCCGGC 180
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      ------------------------------------------------------------
                                                                                  

consensus_9809#1      GCTCCTCCTCCCCTCCTCCGCCTCCGCCGCCCTGCTCGCCGACCCGGCCGCCCCGCTCTC 240
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      ------------------------------------------------------------
                                                                                  

consensus_9809#1      CTCCCTCCGCCTCTCCAATGGCTCCTTCGTCTACCTCTCCTACCCGCCCGACGCCCGCTC 300
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      ------------------------------------------------------------
                                                                                  

consensus_9809#1      CTCCCAGCCGCCTCCCCCCAAAGCCCTCTCCGCCGCCGGCTCCTTCGGCAAGAAGATGAC 360
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      --ACCGAGATCCCCAACCCAACCCAAGCCGCGATGATCCTCCGCATCCGCAGCCGCGACG 58
                                                                                  

consensus_9809#1      CATGGACGACCTCATCGCGCGCCAGATCCGCGTCACCCGCCAGGAGGCCCCGCTCTGCGC 420
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      GCACGGACCGCATCACCGTGCCGGACCCGGCCGCCGCCACCGTCGGCGACCTGCAGCGTC 118
                                                                                  

consensus_9809#1      CGCCGCCTCCTTCGACCGCGACTCCGCCAACGCCTTCCAGCTCCACGTCGCCGAGTCGCT 480
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      TCATCGCGGCGCGCGTCACCGTCCCCGTCCCGCTCCAGCGCCTCTCCCTCGACCCGGCGC 178
                                                                                  

consensus_9809#1      CGCCTTCGCTACCAAGCGCGCCGGCTTCCTCTACGGCCGCGTCGACGCCGACACCAAGGA 540
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      TCCTCCTCCCCTCCTCCGCCTCCGCCGCCCTGCTCGCCGACCCGGCCGCCCCGCTCTCCT 238
                                                                                  

consensus_9809#1      GGTCTTCGTCGATTTCATCTACGAGCCGCCGCAGGTCGGCACCGAGGACGTTGTCCAGCT 600
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      CCCTCCGCCTCTCCAATGGCTCCTTCGTCTACCTCTCCTACCCGCCCGACGCCCGCTCCT 298
                                                                                  

consensus_9809#1      CATGCGGGACGCGCAGGAGGAGGCCCGCGTCGACGCCATCGCCCACGGCCTCGGGATGCG 660
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      CCCAGCCGCCTCCCCCCAAAGCCCTCTCCGCCGCCGGCTCCTTCGGCAAGAAGATGACCA 358
                                                                                  

consensus_9809#1      CCGCGTCGGCCTGGTGTTCACGCAGGCAGTCGGGAGGAAGACCAGCGACACTGGCGAGTA 720
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      TGGACGACCTCATCGCGCGCCAGATCCGCGTCACCCGGCAGGAGGCCCCGCTCTGCGCCG 418
                                                                                  

consensus_9809#1      CACCATGTCCAACCGCGAGGTGCTTCAGGCCACCGAGCTGCAGGCGGAGGGCGGGATCCC 780
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      CCGCCTCCTTCGACCGCGACTCCGCCAACGCCTTCCAGCTCCACGTCGCCGAGTCGCTCG 478
                                                                                  

consensus_9809#1      GGAGTGGGTCACCGCCATAGTCAAGCTCGAGGTGGGGGATGATGGCTCCGGTGATGTGCA 840
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      CCTTCGCTACCAAGCGCGCCGGCTTCCTCTACGGCCGCGTCGACGCCGACACCAAGGAGG 538
                                                                                  

consensus_9809#1      CTTCGAGGCGTTCCAGATGAGTGAGATTTGTGTGAAGCTGTTCAAGGATGGTGTGCTGGA 900
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      TCTTCGTCGATTTCATCTACGAGCCGCCGCAGGTCGGCACCGAGGACGTTGTCCAGCTCA 598
                                                                                  

consensus_9809#1      GACGGAGATTGGGGACAAAGACGATCCCCGCCTGTCCAAGATGCGGAAAGGGGTGGTGGC 960
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      TGCGGGACGCGCAGGAGGAGGCCCGCGTCGACGCCATCGCCCACGGCCTCGGGATGCGCC 658
                                                                                  

consensus_9809#1      TGGGGGAAAGGATACTATGGAGGTGGACAATGACTTCTTCC--TGGTGCCTGTCAAGAT- 1017
consensus_9809#2      ---------GGGTGCCACTGTGTGCAACCGGGCTGTTGCCC--TGATGNCGG--AGAAC- 46
consensus_9809#0      GCGTCGGCCTGGTGTTCACGCAGGCAGTCGGGAGGAAGACCAGCGACACTGGCGAGTACA 718
                                * *      *           *       **   *      *  *  *  

consensus_9809#1      CTCTGATCATCAGGGTCCACTTTCAA-----CCGGC-----TTTCCTATCGAGAACCGTG 1067
consensus_9809#2      CCGTGGGAAACCCTGGTGAG---CAA-----TGAGC-----GCGGCTGTCAAGAGCCACT 93
consensus_9809#0      CCATGTCCAACCGCGAGGTGCTTCAGGCCACCGAGCTGCAGGCGGAGGGCGGGATCCCGG 778
                      *  **   * *   *        **         **             *  ** **   

consensus_9809#1      GAAACCCTGTAGCAATGAGCGCGCTCAAGAGCC---AC-CTGGATCGTGCTAAGCAT--- 1120
consensus_9809#2      GGGATGC-GTGGCTG-AAGCATGCT--GGACCT---ATGTTGGTTAAAGCTGGATGC--- 143
consensus_9809#0      AGTGGGTCACCGCCATAGTCAAGCTCGAGGTGGGGGATGATGGCTCCGGTGATGTGCACT 838
                                 **      *  ***   *       *   *** *   *           

consensus_9809#1      CTACCATTTGTTAAGCG--GATCTCGGACTTCCACCTTCTCCT--CCTGGTTGCTGCTTT 1176
consensus_9809#2      TCGGACTGTGCCACCTG--TGCTGCCTGCCTGGGGTTGG------CTGGGCTGTTGCTT- 194
consensus_9809#0      TCGAGGCGTTCCAGATGAGTGAGATTTGTGTGAAGCTGTTCAAGGATGGTGTGCTGGAGA 898
                              *   *   *             *     *           *  ** **    

consensus_9809#1      CCTAGACATAAAA-GCAGATG-TTCCTGCCCTCACCGCTTGCGTAAAGAACCAGAGCGTG 1234
consensus_9809#2      ---AGACATAAAA-GCAGATG-TTCCTGCCCTCACCGCTTGCGTAAAGAACCAGAGCGTG 249
consensus_9809#0      CGGAGATTGGGGACAAAGACGATCCCCGCCTGTCCAAGATGCGGAAAGAGGTGGTGGCTG 958
                         ***      *   *** * * ** ***    *    **** *****    * *  **

consensus_9809#1      GTGCCTG-AAGGCTACCAACTGCTG-ATCGAGTCATTGGCT--GGTGCCTG---AAGTCT 1287
consensus_9809#2      GTGCCNGGAAGGCTACCAACTGCTGGATCGAGTCATTGGGCTGGGTGCCTG---AAGTCT 306
consensus_9809#0      GGGGAAAGGATACTATGGA--GGTGGACAATGACTTCTTCCT-GGTGCCTGTCAAGATCT 1015
                      * *      *  ***   *  * ** *    * * *       ********   *  ***

consensus_9809#1      ------ACCAGCTGCTGATCGAATCATTTAGCCAGTTAGGCATAATGTTGATCTCTGGA- 1340
consensus_9809#2      ------ACCAGCTGCTGATCGA----CTTGGCCAGTTAGGCATAATGCTGATCTCTGGA- 355
consensus_9809#0      CTGATCATCAGGTATTCTTATTCTTTCCTACTCTGTTGCATAGTATAATGAACTTACAGT 1075
                            * *** *  *  *         *   * ***    *  **  *** **      

consensus_9809#1      --AGCAAAGCACCTGGTCCCTTTAAATTTACT----GCCATATATCA-TGTGTAACT-TA 1392
consensus_9809#2      --AGCAAAGCACCTGGTCCCTTNAAATTTACTGG--GCANTATATCA-TGTGTAACT-TA 409
consensus_9809#0      TTACTAAATAAGTTTGCTTCCTACAACATAGCAATATTAACACTTGACTGGGTAGCAGCA 1135
                        *  ***  *  * *   * *  **  **           *  * * ** *** *   *

consensus_9809#1      TGGTTGT--CTCTGGTGTGTAAAAAAGTCTTGATCAAT-----TCATAGGCGCTTAACTT 1445
consensus_9809#2      TGTTTGT--CTCTGGTGTGTAAAAAAGTCTNGATCAAT-----TCATAGGCGCTTAACTT 462
consensus_9809#0      TGTTTGAAACCTTGAATCATCAGGTGATCTGAGTGGGTGCTCGTTTTAGTAATTTGATGT 1195
                      ** ***   *  **     * *     ***   *   *     *  ***    ** *  *

consensus_9809#1      T---ACACAAGCGCAACATCGTTTT--TTATATGATGCTGAAGCTGTGTCTCCTTCACTT 1500
consensus_9809#2      A---CCCACAGCGCAACATCGTTTT--TTA------------------------------ 487
consensus_9809#0      AAAACTGACAATGAAACAACATAATGGTCAGCGAACAAGGTAGATATGCCGCATGAATTA 1255
                               *  * **** * *  *  * *                              

consensus_9809#1      AAAAAAA----------------------------------------------------- 1507
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      GAAATAAAAATCTCCCAATACAAGAGAAGAATTAGAGCCTTTGTGTTATCCACTAAATAG 1315
                                                                                  

consensus_9809#1      ------------------------------------------------------------
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      TAGAGTGCCTATTTGCATGCAAGCAATTAATTCATGACATATTTATTTTCTGCAAAGTCA 1375
                                                                                  

consensus_9809#1      ------------------------------------------------------------
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      TTATGTTTCTGTTAATTTTTTGATTCAAACTTCGTAGAGGGCCTCCTGCACTGTCTTGAA 1435
                                                                                  

consensus_9809#1      ------------------------------------------------------------
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      AAACTGAATCTCTGGGTGTAAGGGCATGATATATGAGTTCTGTTCAGTGTTAGACTGTTA 1495
                                                                                  

consensus_9809#1      ------------------------------------------------------------
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      GTAAACAGCCATCCACAAATATTCATAATTCTAGTAATAATAGATCCACTTTTGAGAAGT 1555
                                                                                  

consensus_9809#1      ------------------------------------------------------------
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      AATTAACCACTATATAAGAAAAGGAGTATGTGTAGAAAAATTCAGGCATTTTGGCACATT 1615
                                                                                  

consensus_9809#1      ------------------------------------------------------------
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      TTTTGAAGACCTACTGATTTAAGTAACTGTTTCAAGAACGTAAAGATATAGTTACTCTTA 1675
                                                                                  

consensus_9809#1      ------------------------------------------------------------
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      TGTTCCATAGAACTACAAGTTTTTAACTACTTGTTCAAACCACTTGCAGACACACAAAGG 1735
                                                                                  

consensus_9809#1      ------------------------------------------------------------
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      CCCTGTTCTATGACATGCAGCACACATTTTTGTTATTTGGCATGGAACAGGACAAAGCCT 1795
                                                                                  

consensus_9809#1      ------------------------------------------------------------
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      TGTGTTTGTCAGGAAGTGTTGCCAAAATGTTGTAGCTGTTGCAAACTTAGCAATGAGATC 1855
                                                                                  

consensus_9809#1      ------------------------------------------------------------
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      TGTGGTTTTTTGATAGATATGCCAAAATATCTATAGTGTTTGTGAAATTTACTCTAGAAA 1915
                                                                                  

consensus_9809#1      ------------------------------------------------------------
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      AGAGCATCTTATTTCAGTGATGCATCCTAGTTCATAGAGCTGATCTAGATGAGAATGAAT 1975
                                                                                  

consensus_9809#1      ------------------------------------------------------------
consensus_9809#2      ------------------------------------------------------------
consensus_9809#0      CTGTGAATGACGATTCTTGATATCTATGCAACTGATATCATGAATTTGATGTGATTCCAT 2035
                                                                                  

consensus_9809#1      -----------------------------------
consensus_9809#2      -----------------------------------
consensus_9809#0      TTAATTTATTTCAAGAGCAGAATCAATGGGTGATT 2070


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)