cluster # 9830

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Oryza sativa
cluster # 9830 cluster # 9830 Sequences # 6 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9830#0 length = 573 sequences # 6

consensusID : consensus_9830#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 573
fasta sequence

                              [TTTTTTTAGAAATCAAGAAGAGGAAATTTACATTGATTCAATTATCCGTCAACGTCATCAACAACAGCAGAACCAAATCACGGATCAAAATTCTTCTGCCATATTAGACATTCAACAAAATAACAGGAGAACCAAACTGACTCACCGCCAACACCATCATCAATCTCCCTCTCAGCCGTGGTCACCTTCGATCCACACCTACCATGCGGCCATCAAGGAGAA-GGGGGA-GGCCGCCGCTGCTCGTCGGAGGATGAGGCCGTCACCACCACCACTGCTAGCTCTAGGCTGAGGCCGTCGCCGCCGCCACTGCTGCGCTGTGGATCGGGCGGCCTTTGGCTTCAAGGCGGTTGGATCCAGTGTCCGCCGGCCTCTAGGCGGCCGAATCCAACGGGATTCAGCACACTCTCCTTCCTCCCGCCGCGGGATTCGTTGGCCACGAGTCCAAAGGCGTCAGATCCGGCGGCAAGCAAATGAATCGGGGCGGCGAGCTGAGAGGAATGACGAGTGGCGATGAGGACGAGGAAAGAGGATGAAGGAACGATGCTCCTTTTTAATTTTTTTCTACTCCTTCAG]

[+] EMBL CF300428             [TTTTTTTAGAAATCAAGAAGAGGAAATTTACATTGATTCAATTATCCGTCAACGTCATCAACAACAGCAGAACCAAATCACGGATCAAAATTCTTCTGCCATATTAGACATTCAACAAAATAACAGGAGAACCAAACTGACTCACCGCCAACACCATCATCAATCTCCCTCTCAGCCGTGGCCACCTTCGATCCACACCTACCATGCGGCCATCAAGGAGAAGGGGGGA GGCCGCCGCTGCTCGTCGGAGGATGAGGCCGTCACCACCACCACTGCTAGCTCTAGGCTGAGGCCGTCGCCGCCGCCACTGCTGCGCTGTGGATCGGGCGGCCTTTGGCTTCAAGGCGGTTGGATCCAGTGTCCGCCGGCCTCTAGGCGGCCGAATCCAACGGGATTCAGCACACTCTCCTTCCTCCCGCCGCGGGATTCGTTGGCCACGAGTCCAAAGGCGTCAGATCCGGCGGCAAGCAAATGAATCGGGGCGGCGAGCTGAGAGGAATGACGAGTGGCGATGAGGACGAGGAAAGAGGATGAAGGA                                    ]
[-] EMBL C98129               [       tttAATCAAGAAGAGGAAATTTACATTGATTCAATTATCCGTCAACGTCATCAACAACAGCAGAACCAAATCACGGATCAAAATTCTTCTGCCATATTAGACATTCAACAAAATAACAGGAGAACCAAACTGACTCACCGCCAACACCATCATCAATCTCCCTCTCAGCCGTGGTCACCTTCGATCCACACCTACCATGCGGCCATCAAGGAGAA GGGGGA GGCCGCCGCTGCTCGTCGGAGGATGAGGCCGTCACCACCACCACTGCTAGCTCTAGGCTGAGGCCGTCGCCGCCGCCACTGCTGCGCTGTGGATCGGGCGGCCTTTGGCTTCAAGGCGGTTGGATCCAGTGTCCGCCGGCCTCTAGGCGGCCGAATCCAACGGGATTCAGCACACTCTCCTTCCTCCCGCCGCGGGATTCGTTGGCCACGAGTCCAAAGGCGTCAGATCCGGCGGCAAGCAAATGAAT                                                                                                 ]
[-] EMBL AK062987             [                       AAATTTACATTGATTCAATTATCCGTCAACGTCATCAACAACAGCAGAACCAAATCACGGATCAAAATTCTTCTGCCATATTAGACATTCAACAAAATAACAGGAGAACCAAACTGACTCACCGCCAACACCATCATCAATCTCCCTCTCAGCCGTGGTCACCTTCGATCCACACCTACCATGCGGCCATCAAGGAGAA GGGGGA GGCCGCCGCTGCTCGTCGGAGGATGAGGCCGTCACCACCACCACTGCTAGCTCTAGGCTGAGGCCGTCGCCGCCGCCACTGCTGCGCTGTGGATCGGGCGGCCTTTGGCTTCAAGGCGGTTGGATCCAGTGTCCGCCGGCCTCTAGGCGGCCGAATCCAACGGGATTCAGCACACTCTCCTTCCTCCCGCCGCGGGATTCGTTGGCCACGAGTCCAAAGGCGTCAGATCCGGCGGCAAGCAAATGAATCGGGGCGGCGAGCTGAGAGGAATGACGAGTGGCGATGAGGACGAGGAAAGAGGATGAAGGAACGATGCTCCTTT                       ]
[-] EMBL C27636               [                                                                                                                                                                                               TCAANACCTACCATGCGGCCATCAAGGAGAA GGGGGAGGGCCGCCGCTGCTCGTCGGAGGATGAGGCCGTCACCACCACCACTGCTAGCTCTAGGCTGAGGCCGTCGCCGCCGCAACT NTGCGCTGTGGATCGGGC GCCTTTGGCTTCAAGGCGGTTGGATCCAGTGTCCGGC GCCTCTAGGCGGCCGAATCCAACGGGATTCAGCACACTCTCCTTCCTCCCGCCGCGGGATTCGTTGGCCACGAGTCCAAAGGCGTCAGATCCGGCGGCAAGCAAATGAATCGGGGCGGCGAGCTGAGAGGAATGAC                                                                       ]
[-] EMBL CF300429             [                                                                                                                                                                                                                  CATCAAGGAGAA GGGGGA GGCCGCCGCTGCTCGTCGGAGGATGAGGCCGTCACCACCACCACTGCTAGCTCTAGGCTGAGGCCGTCGCCGCCGCCACTGCTGCGCTGTGGATCGGGCGGCCTTTGGCTTCAAGGCGGTTGGATCCAGTGTCCGCCGGCCTCTAGGCGGCCGAATCCAACGGGATTCAGCACACTCTCCTTCCTCCCGCCGCGGGATTCGTTGGCCACGAGTCCAAAGGCGTCAGATCCGGCGGCAAGCAAATGAATCGGGGCGGCGAGCTGAGAGGAATGACGAGTGGCGATGAGGACGAGGAAAGAGGATGAAGGAACGATGCCCCTTTTTAATTTTTTTCTACTCCTTCAG]
[-] EMBL OS0752A              [                                                                                                                                                                                                                                           caGCTGCTCGTCGGAGNATGAGGCCGTCACCACCACCACTGCTAGCTCTAGGCTNAGGCCGTCGCCGCCGCNACCTNTGCGCTGTGGATCGGGCGGCNTTTGGCTTCAAGNCGGTTGGATCCAGTGTCCGCCGGCCTCTAGGCGGCCGAATCCAACGGGATTCAGCACACTCTCCTTCCTCCCGCCGCGGGATTCGTTGGCCACGAGTCCAAAGGCGTCAGATCCGGCGGCAAGCAAATGAATC                                                                                                ]




>consensus_9830#0
TTTTTTTAGAAATCAAGAAGAGGAAATTTACATTGATTCAATTATCCGTCAACGTCATCA
ACAACAGCAGAACCAAATCACGGATCAAAATTCTTCTGCCATATTAGACATTCAACAAAA
TAACAGGAGAACCAAACTGACTCACCGCCAACACCATCATCAATCTCCCTCTCAGCCGTG
GTCACCTTCGATCCACACCTACCATGCGGCCATCAAGGAGAAGGGGGAGGCCGCCGCTGC
TCGTCGGAGGATGAGGCCGTCACCACCACCACTGCTAGCTCTAGGCTGAGGCCGTCGCCG
CCGCCACTGCTGCGCTGTGGATCGGGCGGCCTTTGGCTTCAAGGCGGTTGGATCCAGTGT
CCGCCGGCCTCTAGGCGGCCGAATCCAACGGGATTCAGCACACTCTCCTTCCTCCCGCCG
CGGGATTCGTTGGCCACGAGTCCAAAGGCGTCAGATCCGGCGGCAAGCAAATGAATCGGG
GCGGCGAGCTGAGAGGAATGACGAGTGGCGATGAGGACGAGGAAAGAGGATGAAGGAACG
ATGCTCCTTTTTAATTTTTTTCTACTCCTTCAG

clustalw multiple alignements is not computed in this case