cluster # 9866

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Oryza sativa
cluster # 9866 cluster # 9866 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9866#0 length = 2156 sequences # 7
consensusID : consensus_9866#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2156
fasta sequence
                              [CCGTCTCCCGCCTTCGTCCTCCCCTCCAGCCGCCGACCGACCGAGCGCGATGGCGGCGGCGCGGCTCCGGCTGCTGTCCGCGGGGCTCCTCTCGCCGGCGGTGTCCAGGGCGCGGCACTCTTCTTCCCTGCAGGGTCTCCGCGCGCTGTCCACGCTCTCCACTACGCTCGGGTCCGGCGCGGGGGAGGACGAGATCGAGCGCATCCGCCGCGAGTTCGAGGACGCCAAGCGGAACTACCTCAGCATCCCCGTCGCCATCAAGGACATGGCCAAGATGAACCCGCAAGGCATTTATGTGAACAAGAACGTCAAACTGGATGACCTGCAAGTCTATGGTTTTGACTATGACTACACGCTGTCCCACTACTCCGAGCACCTGCAGTGCTTGATCTACGATCTCGCCAAGAAGCACTTGGTCAATGAGTTGAAGTATCCGGAGAGCTGCTTGAAGTATGAGTATGACCACGGCTTTCCCATCAGGGGGCTCTATTATGACAGATTAAAAGGTTGCCTTTTGAAGCTTGATTTTTTCGGGTCTATCGAACCAGATGGTTGCTTCTTTGGGCGGCATAAGCTGAGTTTGAGTGAGATAAAAGAACTCTATGGCACACGGCATATTGGCAGAGATCAAGCTCGCCAGCTTGTTGGGCTAATGGATGTCTTCTGTTTTAGTGAGGCATGCCTTCTTGCTGATATAGTTCAGCACTTTGTAGATGCCAGGCTGGAGTTTGATGCATCCTATGTATATGAAGACGTAAACCAATCGATTCAGCATGTCCACAGAAGTGGTCTGATTCACAGGAAAATTCTTTCGGAGCCTCAGAAATATCTGATAAAAAATAGCCAGGTCTTCCGTTTCTTAAAGATGCTAAGAGAGAAGGGGAAAAACCTATTTCTTCTCACCAACTCACCTTTCTACTTTGTGGATGGAGGAATGAGCTACTTGCTTGAGGATGAGCATTTTGATGGGAATTCCTGGAGGGAGCTCTTTGACGTTGTCATTGCGCAGGCAAATAAACCGACTTTCTATAATTCAGACCACCCATTCAGGGTATATGACACTCAAAAGGATACACTAGCTTTTACTGCAGTTGACAAGTTTCTGCCAAATGAAGTTTATTATCACGGTTGCTTAAAATCATTTCTGCAGATTACAAAGTGGAGAGGCCCAGAGGTTATATACTTTGGTGATCATCTTCTCAGTGACTTGAGAGGGCCTGCAAAAGCTGGCTGGCGAACAGCTGCTGTAATTCGTGAACTTGAGGATGAAATAGAAATCCAGAATGGTGACAGCTACCGGTTCCAACAGGCAAAATTAAGTATAATACATGATCTACTTGGGAAAGTTCATGCAACTGTGGTTAGCACTGAGAAAGGACAAGTTTACCGAGCATTGCTTGATGAGTTGAATGCAGAAAGGCGTCAATGTCGATCTGCGATGCGAGATCTTTTCAATAGCTCTTTTGGTGCAACCTTCCTTACAGATACTGGAAGGGAATCATCGTTTGCTTATCACATCCATCAATATGCAGATATTTACACCAGCAAGCTTGAGAATTTTTTGTCATATGCCCCTGAATCATGGCTCCATCCACCTCATGACATAAAGATAATGCCACATAATGCGAAGGTCCCAGCGAGTTTGTTCAGTGGCTCGTAGCTCATTCTATCCATTTCCGATGGAGAACCGTAACACCCATTATGGTTTCTGTGTCCGACCCGAGAGTATGAACTGCCATGCCACTGCATCTGGTTAGCTGATGAATAAAGCTTGGGTACACCCAACCCAACATACGTGGCGCCAACTCAGCAAGATGTGGCTAGTGCTGCGATTGACAGAAGAGAAGTGATGGTTGTTATGTTCTGTACCGTTATTTGAGGATGATTTCGGTCTGACAGGCGTGGTTTTCTGTTTCCAAGACATCCAGAGGACTAAACAACCAACCAAATGATGGTTGCTAATAAGAATTGTTTTCCAATCATCCATCTTGTTTCTCATTGTTCTATTCTCCTTTTGGATGAGATATGTAAAACACACATGATTCGTATTCCGTTAACAGT-AAAATCTCCCAAATTAT-GGGTAATCCTTTTCCTTCAAGCTTCTTTTGAATGATC----AGCAAGCAAGGAATGGATAAACATATACAGTATTTGAATTT]

[+] EMBL AK073882             [CCGTCTCCCGCCTTCGTCCTCCCCTCCAGCCGCCGACCGACCGAGCGCGATGGCGGCGGCGCGGCTCCGGCTGCTGTCCGCGGGGCTCCTCTCGCCGGCGGTGTCCAGGGCGCGGCACTCTTCTTCCCTGCAGGGTCTCCGCGCGCTGTCCACGCTCTCCACTACGCTCGGGTCCGGCGCGGGGGAGGACGAGATCGAGCGCATCCGCCGCGAGTTCGAGGACGCCAAGCGGAACTACCTCAGCATCCCCGTCGCCATCAAGGACATGGCCAAGATGAACCCGCAAGGCATTTATGTGAACAAGAACGTCAAACTGGATGACCTGCAAGTCTATGGTTTTGACTATGACTACACGCTGTCCCACTACTCCGAGCACCTGCAGTGCTTGATCTACGATCTCGCCAAGAAGCACTTGGTCAATGAGTTGAAGTATCCGGAGAGCTGCTTGAAGTATGAGTATGACCACGGCTTTCCCATCAGGGGGCTCTATTATGACAGATTAAAAGGTTGCCTTTTGAAGCTTGATTTTTTCGGGTCTATCGAACCAGATGGTTGCTTCTTTGGGCGGCATAAGCTGAGTTTGAGTGAGATAAAAGAACTCTATGGCACACGGCATATTGGCAGAGATCAAGCTCGCCAGCTTGTTGGGCTAATGGATGTCTTCTGTTTTAGTGAGGCATGCCTTCTTGCTGATATAGTTCAGCACTTTGTAGATGCCAGGCTGGAGTTTGATGCATCCTATGTATATGAAGACGTAAACCAATCGATTCAGCATGTCCACAGAAGTGGTCTGATTCACAGGAAAATTCTTTCGGAGCCTCAGAAATATCTGATAAAAAATAGCCAGGTCTTCCGTTTCTTAAAGATGCTAAGAGAGAAGGGGAAAAACCTATTTCTTCTCACCAACTCACCTTTCTACTTTGTGGATGGAGGAATGAGCTACTTGCTTGAGGATGAGCATTTTGATGGGAATTCCTGGAGGGAGCTCTTTGACGTTGTCATTGCGCAGGCAAATAAACCGACTTTCTATAATTCAGACCACCCATTCAGGGTATATGACACTCAAAAGGATACACTAGCTTTTACTGCAGTTGACAAGTTTCTGCCAAATGAAGTTTATTATCACGGTTGCTTAAAATCATTTCTGCAGATTACAAAGTGGAGAGGCCCAGAGGTTATATACTTTGGTGATCATCTTCTCAGTGACTTGAGAGGGCCTGCAAAAGCTGGCTGGCGAACAGCTGCTGTAATTCGTGAACTTGAGGATGAAATAGAAATCCAGAATGGTGACAGCTACCGGTTCCAACAGGCAAAATTAAGTATAATACATGATCTACTTGGGAAAGTTCATGCAACTGTGGTTAGCACTGAGAAAGGACAAGTTTACCGAGCATTGCTTGATGAGTTGAATGCAGAAAGGCGTCAATGTCGATCTGCGATGCGAGATCTTTTCAATAGCTCTTTTGGTGCAACCTTCCTTACAGATACTGGAAGGGAATCATCGTTTGCTTATCACATCCATCAATATGCAGATATTTACACCAGCAAGCTTGAGAATTTTTTGTCATATGCCCCTGAATCATGGCTCCATCCACCTCATGACATAAAGATAATGCCACATAATGCGAAGGTCCCAGCGAGTTTGTTCAGTGGCTCGTAGCTCATTCTATCCATTTCCGATGGAGAACCGTAACACCCATTATGGTTTCTGTGTCCGACCCGAGAGTATGAACTGCCATGCCACTGCATCTGGTTAGCTGATGAATAAAGCTTGGGTACACCCAACCCAACATACGTGGCGCCAACTCAGCAAGATGTGGCTAGTGCTGCGATTGACAGAAGAGAAGTGATGGTTGTTATGTTCTGTACCGTTATTTGAGGATGATTTCGGTCTGACAGGCGTGGTTTTCTGTTTCCAAGACATCCAGAGGACTAAACAACCAACCAAATGATGGTTGCTAATAAGAATTGTTTTCCAATCATCCATCTTGTTTCTCATTGTTCTATTCTCCTTTTGGATGAGATATGTAAAACACACATGATTCGTATTCCGTTAACAGT AAAATCTCCCAAATTAT GGGTAATCCTTTTCCTTCAAGCTTCTTTTGAATGATC    AGCAAGCAAGGAATGGATAAACATATACAGTA         ]
[+] EMBL CA998305             [                                                                                                                                                                                                                                              CTCAGCATCCCCGTCGCCATCAAGGACATGGCCAAGATGAACCCGCAAGGCATTTATGTGAACAAGAACGTCAAACTGGATGACCTGCAAGTCTATGGTTTTGACTATGACTACACGCTGTCCCACTACTCCGAGCACCTGCAGTGCTTGATCTACGATCTCGCCAAGAAGCACTTGGTCAATGAGTTGAAGTATCCGGAGAGCTGCTTGAAGTATGAGTATGACCACGGCTTTCCCATCAGGGGGCTCTATTATGACAGATTAAAAGGTTGCCTTTTGAAGCTTGATTTTTTCGGGTCTATCGAACCAGATGGTTGCTTCTTTGGGCGGCATAAGCTGAGTTTGAGTGAGATAAAAGAACTCTATGGCACACGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CA997863             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCAGACATCAAGCTCGCCAACTTGTTGGGCTAATGGATGTCTTCTGTTTTAATGAGGCATGCCTGCTTGATGATTTAGGTGACCACTTTGTAGATGCCAGGATGGAGTTTGATGCATCCTATGTATATGAAGACGTAAACCAATCGATTCAGCATGTCCACAGAAGTGGTCTGATTCACAGGAAAATTCTTTCGGAGCCTCAGAAATATCTGATAAAAAATAGCCAGGTCTTACGTTTGTTAAAGATGCTCAGAGAGAAGGGGAAAAGCCTATTTCTTCTCACCAACTCACCTTTCTACTTTGTGGATGGAGGAATGAGCTACTTCCTTGACGATGAGCATTCTGATGGGAATTCCTGAAGGGAGCTCTTTGACGTTGACATTGCGCAGGCAAATAAACCGACTTTCTGTAATTCAGACCACCCATTCAGGGTATATGACACTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF307362             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGACTTGAGAGGGCCTGCAAAAGCTGGCTGGCGAACAGCTGCTGTAATTCGTGAACTTGAGGATGAAATAGAAATCCAGAATGGTGACAGCTACCGGTTCCAACAGGCAAAATTAAGTATAATACATGATCTACTTGGGAAAGTTCATGCAACTGTGGTTAGCACTGAGAAAGGACAAGTTTACCGAGCATTGCTTGATGAGTTGAATGCAGAAAGGCGTCAATGTCGATCTGCGATGCGAGATCTTTTCAATAGCTCTTTTGGTGCAACCTTCCTTACAGATACTGGAAGGGAATCATCGTTTGCTTATCACATCCATCAATATGCAGATATTTACACCAGCAAGCTTGAGAATTTTTTGTCATATGCCCCTGAATCATGGCTCCATCCACCTCATGACATAAAGATAATGCCACATAATGCGAAGGTCCCAGCGAGTTTGTTCAGTGGCTCGTAGCTCATTCTATCCATTTCCGATGGAGAACCGTAACACCCATTATGGTTTCTGTGTCCGACCCGAGAGTATGAACTGCCATGCCACTGCATCTGGTTAGCTGATGAATAAAGCTTGGGTACACCCAACCCAACA                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB663845             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CAACTGTGGTTAGCACTGAGAAAGGACAAGTTTACCGAGCATTGCTTGATGAGTTGAATGCAGAAAGGCGTCAATGTCGATCTGCGATGCGAGATCTTTTCAATAGCTCTTTTGGTGCAACCTTCCTTACAGATACTGGAAGGGAATCATCGTTTGCTTATCACATCCATCAATATGCAGATATTTACACCAGCAAGCTTGAGAATTTTTTGTCATATGCCCCTGAATCATGGCTCCATCCACCTCATGACATAAAGATAATGCCACATAATGCGAAGGTCCCAGCGAGTTTGTTCAGTGGCTCGTAGCTCATTCTATCCATTTCCGATGGAGAACCGTAACACCCATTATGGTTTCTGTGTCCGACCCGAGAGTATGAACTGCCATGCCACTGCATCTGGTTAGCTGATGAATAAAGCTTGGGTACACCCAACCCAACATACGTGGCGCCAACTCAGCAAGATGTGGCTAGTGCTGCGATTGACAGAAGAGAAGTGATGGTTGTTATGTTCTGTACCGTTATTTGAGGATGATTTCGGTCTGACAGGCGTGGTTTTCTGTTTCCAAGACATCCAGAGGACTAAACAACCAACCAAATGATGGTTGCTAATAAGAATTGTTTTCCAATCATCCATCTTGTTTCTCATTGTTCTATTCTCCTTTTGGATGAGATATGTAAAACACACATGATTCGTATTCCGTTAACAGT AAAATCTCCCAAATTAT GGGTAATCCTTTTCCTTCAAGCTTCTTTT                                                     ]
[+] EMBL AK063811             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGCTCCATCCACCTCATGACATAAAGATAATGCCACATAATGCGAAGGTCCCAGCGAGTTTGTTCAGTGGCTCGTAGCTCATTCTATCCATTTCCGATGGAGAACCGTAACACCCATTATGGTTTCTGTGTCCGACCCGAGAGTATGAACTGCCATGCCACTGCATCTGGTTAGCTGATGAATAAAGCTTGGGTACACCCAACCCAACATACGTGGCGCCAACTCAGCAAGATGTGGCTAGTGCTGCGATTGACAGAAGAGAAGTGATGGTTGTTATGTTCTGTACCGTTATTTGAGGATGATTTCGGTCTGACAGGCGTGGTTTTCTGTTTCCAAGACATCCAGAGGACTAAACAACCAACCAAATGATGGTTGCTAATAAGAATTGTTTTCCAATCATCCATCTTGTTTCTCATTGTTCTATTCTCCTTTTGGATGAGATATGTAAAACACACATGATTCGTATTCCGTTAACAGT AAAATCTCCCAAATTAT GGGTAATCCTTTTCCTTCAAGCTTCTTTTGAATGATC    AGCAAGCAAGGAATGGATAAACATATACAGTATT       ]
[-] EMBL D42241               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCCATCTTGTTTCTCATTGTTCTATTCTCCTTTT GATGAGATATGTAAAACACACATGATTCGTATTCCGTTAACAGTAAAAATCTCCCAAATTATGGGGTAATCCTTTTCCTTCAAGCTTCTTTTGAATGATCAGCAAGCAAGCAAGGAATGGATAAACATATACAGTATTTGAATTT]




>consensus_9866#0
CCGTCTCCCGCCTTCGTCCTCCCCTCCAGCCGCCGACCGACCGAGCGCGATGGCGGCGGC
GCGGCTCCGGCTGCTGTCCGCGGGGCTCCTCTCGCCGGCGGTGTCCAGGGCGCGGCACTC
TTCTTCCCTGCAGGGTCTCCGCGCGCTGTCCACGCTCTCCACTACGCTCGGGTCCGGCGC
GGGGGAGGACGAGATCGAGCGCATCCGCCGCGAGTTCGAGGACGCCAAGCGGAACTACCT
CAGCATCCCCGTCGCCATCAAGGACATGGCCAAGATGAACCCGCAAGGCATTTATGTGAA
CAAGAACGTCAAACTGGATGACCTGCAAGTCTATGGTTTTGACTATGACTACACGCTGTC
CCACTACTCCGAGCACCTGCAGTGCTTGATCTACGATCTCGCCAAGAAGCACTTGGTCAA
TGAGTTGAAGTATCCGGAGAGCTGCTTGAAGTATGAGTATGACCACGGCTTTCCCATCAG
GGGGCTCTATTATGACAGATTAAAAGGTTGCCTTTTGAAGCTTGATTTTTTCGGGTCTAT
CGAACCAGATGGTTGCTTCTTTGGGCGGCATAAGCTGAGTTTGAGTGAGATAAAAGAACT
CTATGGCACACGGCATATTGGCAGAGATCAAGCTCGCCAGCTTGTTGGGCTAATGGATGT
CTTCTGTTTTAGTGAGGCATGCCTTCTTGCTGATATAGTTCAGCACTTTGTAGATGCCAG
GCTGGAGTTTGATGCATCCTATGTATATGAAGACGTAAACCAATCGATTCAGCATGTCCA
CAGAAGTGGTCTGATTCACAGGAAAATTCTTTCGGAGCCTCAGAAATATCTGATAAAAAA
TAGCCAGGTCTTCCGTTTCTTAAAGATGCTAAGAGAGAAGGGGAAAAACCTATTTCTTCT
CACCAACTCACCTTTCTACTTTGTGGATGGAGGAATGAGCTACTTGCTTGAGGATGAGCA
TTTTGATGGGAATTCCTGGAGGGAGCTCTTTGACGTTGTCATTGCGCAGGCAAATAAACC
GACTTTCTATAATTCAGACCACCCATTCAGGGTATATGACACTCAAAAGGATACACTAGC
TTTTACTGCAGTTGACAAGTTTCTGCCAAATGAAGTTTATTATCACGGTTGCTTAAAATC
ATTTCTGCAGATTACAAAGTGGAGAGGCCCAGAGGTTATATACTTTGGTGATCATCTTCT
CAGTGACTTGAGAGGGCCTGCAAAAGCTGGCTGGCGAACAGCTGCTGTAATTCGTGAACT
TGAGGATGAAATAGAAATCCAGAATGGTGACAGCTACCGGTTCCAACAGGCAAAATTAAG
TATAATACATGATCTACTTGGGAAAGTTCATGCAACTGTGGTTAGCACTGAGAAAGGACA
AGTTTACCGAGCATTGCTTGATGAGTTGAATGCAGAAAGGCGTCAATGTCGATCTGCGAT
GCGAGATCTTTTCAATAGCTCTTTTGGTGCAACCTTCCTTACAGATACTGGAAGGGAATC
ATCGTTTGCTTATCACATCCATCAATATGCAGATATTTACACCAGCAAGCTTGAGAATTT
TTTGTCATATGCCCCTGAATCATGGCTCCATCCACCTCATGACATAAAGATAATGCCACA
TAATGCGAAGGTCCCAGCGAGTTTGTTCAGTGGCTCGTAGCTCATTCTATCCATTTCCGA
TGGAGAACCGTAACACCCATTATGGTTTCTGTGTCCGACCCGAGAGTATGAACTGCCATG
CCACTGCATCTGGTTAGCTGATGAATAAAGCTTGGGTACACCCAACCCAACATACGTGGC
GCCAACTCAGCAAGATGTGGCTAGTGCTGCGATTGACAGAAGAGAAGTGATGGTTGTTAT
GTTCTGTACCGTTATTTGAGGATGATTTCGGTCTGACAGGCGTGGTTTTCTGTTTCCAAG
ACATCCAGAGGACTAAACAACCAACCAAATGATGGTTGCTAATAAGAATTGTTTTCCAAT
CATCCATCTTGTTTCTCATTGTTCTATTCTCCTTTTGGATGAGATATGTAAAACACACAT
GATTCGTATTCCGTTAACAGTAAAATCTCCCAAATTATGGGTAATCCTTTTCCTTCAAGC
TTCTTTTGAATGATCAGCAAGCAAGGAATGGATAAACATATACAGTATTTGAATTT
clustalw multiple alignements is not computed in this case