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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9875#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 3140 fasta sequence
[GTTACGTCCCACCACCATCACGCTCACCGCTTCGCGATCTCTTTTACGATTAACCCCTCGCAGAATTAGATATAGCGGCGCGGCGAGAGAGAGAGACTATTTTTGGGCGTAATCCAGCGCGGCCGTCCGCCCGAGATCTCCCTCTCCCACCGCGCGTTTCGCCGCTGGAATCCGCGCCGCAGAGAGCGGGGGGTATAAAGAGGTGAGACGGTGGTCTCCCGGATTCGGTGGGTGGTGGGTCCCGCTGCTGTGTGCGTGTGCGTGCCGAGGGAGGGAGGGAGGCCTCGTCGCCGCCGATGGAGTCGTCGGCCGGCGGCGGCGGCGGCGAGTCTCCGCCTCCGGCGAAGCCCGTGCTGCTCCACGGGGACCTCGACCTGTGGGTGGTCGAGGCGCGCCTGCTCCCAAACATGGACATGTTCTCCGAGCACGTACGGCGGTGCTTCGCCGCCTGCAAGCCGCCCACCTCCTGCGCCACCGCCAGGCAGCCGCGCCACGCCCGCGGCCACCACCGCCGGAAGATCATCACCAGCGACCCCTACGTCACGCTCTCCGTCGCCGGCGCCGTGGTGGCGCGCACCCGCGTCATCCCCAACGACCAGGACCCCGTCTGGGACGAGCGCTTCGCCGTGCCCCTCGCCCACTACGCCGCCGCGCTCGAGTTCCACGTCGAGGACAACGACACGTTCGGCGCGCAGCTCATCGGCACCGTCACCATCCCCGCCGACAGGGTCGCCTCGTGCCAGGAGGTGGAGGACTGGTTCCCCATCATCGGCAACAACGGCAGGCCGTACAAGCCCGACACGGCGCTCCGCCTCCGCCTCCGCTTCAACCCCGCGGCCGACAACCCGCTCTACCGCCGCGGCATCCCCGGCGACCCCGACCACCATGGGATCAAGGACTCCTACTTCCCGCTCCGCCACGGCGGCCGCGTCACGCTGTACCAGGACGCCCACTACAGGGAAGGGGACCTGCCGGAGATCGAGCTCGACGAGGGGGGCAAGGTGTTCGACCACAACGCGTGCTGGGAGGACATCTGCCACGCCATCCTCGAGGCGCACCACATGATATACATCGTCGGCTGGTCGGTGTACGACAAGGTGCGCCTCGTCCGGGAGCCGTCGCCGTCGAGGCCGCTGCCGGAAGGCGGCGACCTCAATCTCGGGGAGCTGCTCAAGTTCAAGTCGCAGGAGGGCGTGAGGGTGTGCCTGCTCGTGTGGGACGACAAGACGTCGCACGACAAGTTGTTCATCAAAACGGGTGGAGTGATGGCGACACATGATGAAGAAACTAGAAAATTCTTCAAGCATTCCTCAGTCATTTGTGTTCTTTCACCTCGGTATGCCAGCAGTAAGCTGAGCATTTTCAAACAACAGGTTGTTGGGACTTTGTTTACCCATCATCAAAAATGCGTGCTGGTTGATACACAAGCTTGGGGAAACAAGCGGAAGATTACTGCTTTTATCGGTGGCCTGGATCTTTGTGATGGGCGTTATGATACACCCGAACATAGGCTTTTTAAGGATCTTGACACAGTATTCGATAATGATTATCATAACCCTACATTTCCGTCAGGTGCAAAGGGGGGGCCTAGACAACCATGGCATGACCTTCACTGTAGGATTGATGGTCCAGCTGCGTATGATGTCTTGAAAAATTTTGAGCAACGCTGGAGAAAGGCAACGAAATGGCGTGAACGATTTAGAAAAGTGTCTCATTGGAAAGATGATGCCCTGATAAAGTTGGAACGTATCTCATGGATACTTAGCCCTTCGCCTACTATTCCAAATGATGATATTAGTTTGCGGGTTTCAAAAGAAGAAGATCCTGAAAATTGGCATGTTCAGGTATTCCGGTCAATAGACTCTGGTTCGCTTAAAGGGTTTCCTAGTGATTGCAAAGAAGCTTCAAAGCAGAATCTTATTTGCCGGAAGGACCTGATAATTGATAAGAGCATCCACACTGCTTATGTCCGGGCAATCAGATCCGCCCAGCATTTCATTTATATTGAAAATCAATATTTCCTTGGGTCATCATATGCTTGGCCGTCCTATGTTAATTCAGGTGCTGACAATCTGGTACCTATTGAATTGGCCCTCAAAATTGCAAGCAAGATTAGGGCTGGTGAACGGTTTGCAGTTTATGTAGTCATACCGATGTGGCCTGAAGGAGTCCCTACAGCAGCTTCTGTACAAGAAATTCTTTTCTTTCAGACAATGGAGATGATGTATCGTATAATTGCACAAGAGCTCAAGGCCATGAATATTAAGAATGCACACCCTCAAGATTACTTGAACTTCTATTGTCTGGGCAATCGAGAAGAATCATCATCATCAAATGGCAGCCCTGAATCTAACGATAAAAGTGCAGCGGCCTTGGCTAGAAAATACCGGCGTTTTATGATCTATGTTCATGCAAAGGGGATGATTGTAGATGATGAATATGTTATTCTGGGGTCAGCAAACATCAACCAAAGATCTTTGGCTGGTTCCAGAGATACTGAAATTGCCATGGGCGCATACCAGCCTCACCACACATGGTCTACAAAGGGGGGTCATCCTCGCGGTCAGGTATACGGGTATAGAACTTCCCTCTGGGCAGAGCATCTTGGGATGGTTGATGACCTCTTCAAGGATCCATCAAGTTTGGAGTGTGTAAATTATGTCAATGAAATAGCAGAAGAGAACTGGAGAAGGTTCACCGCAGAACAACTTATAACGTTACAAGGGCACCTCCTCAAATACCCAGTCAAGGTAGAGGCTGACGGTAAGGTTGGTCCATTGCCAGAACACGAATGCTTTCCTGACGTTGGTGGCAAGATTCTTGGAGCTCCAACTTCACTCCCTGATACGCTAACAATGTAACACGGTTCAAGCAAAATATTGACATGTTTTCCAGAATTGAAGCCCTTTTTTGTTCATATTTTAAACTTTGTGATTGCTTGAAGATGGTATCGGAGAGGAATTTGTATCATGTCTGTATAATCATCCAGAGAGGGGGTATAGGGAGAGCTCAAGCTGCTAATGGTGTCTGTAAAGTTTGTGGCTATGTGAGAAATTTTTCAGCCGTTGTAAATGAAACACACGACAGTACGATAGACTACAGTGTTGTCTCATTTCCATTGCAATCATACACGCACAACT]
[+] EMBL AK109315 [GTTACGTCCCACCACCATCACGCTCACCGCTTCGCGATCTCTTTTACGATTAACCCCTCGCAGAATTAGATATAGCGGCGCGGCGAGAGAGAGAGACTATTTTTGGGCGTAATCCAGCGCGGCCGTCCGCCCGAGATCTCCCTCTCCCACCGCGCGTTTCGCCGCTGGAATCCGCGCCGCAGAGAGCGGGGGGTATAAAGAGGTGAGACGGTGGTCTCCCGGATTCGGTGGGTGGTGGGTCCCGCTGCTGTGTGCGTGTGCGTGCCGAGGGAGGGAGGGAGGCCTCGTCGCCGCCGATGGAGTCGTCGGCCGGCGGCGGCGGCGGCGAGTCTCCGCCTCCGGCGAAGCCCGTGCTGCTCCACGGGGACCTCGACCTGTGGGTGGTCGAGGCGCGCCTGCTCCCAAACATGGACATGTTCTCCGAGCACGTACGGCGGTGCTTCGCCGCCTGCAAGCCGCCCACCTCCTGCGCCACCGCCAGGCAGCCGCGCCACGCCCGCGGCCACCACCGCCGGAAGATCATCACCAGCGACCCCTACGTCACGCTCTCCGTCGCCGGCGCCGTGGTGGCGCGCACCCGCGTCATCCCCAACGACCAGGACCCCGTCTGGGACGAGCGCTTCGCCGTGCCCCTCGCCCACTACGCCGCCGCGCTCGAGTTCCACGTCGAGGACAACGACACGTTCGGCGCGCAGCTCATCGGCACCGTCACCATCCCCGCCGACAGGGTCGCCTCGTGCCAGGAGGTGGAGGACTGGTTCCCCATCATCGGCAACAACGGCAGGCCGTACAAGCCCGACACGGCGCTCCGCCTCCGCCTCCGCTTCAACCCCGCGGCCGACAACCCGCTCTACCGCCGCGGCATCCCCGGCGACCCCGACCACCATGGGATCAAGGACTCCTACTTCCCGCTCCGCCACGGCGGCCGCGTCACGCTGTACCAGGACGCCCACTACAGGGAAGGGGACCTGCCGGAGATCGAGCTCGACGAGGGGGGCAAGGTGTTCGACCACAACGCGTGCTGGGAGGACATCTGCCACGCCATCCTCGAGGCGCACCACATGATATACATCGTCGGCTGGTCGGTGTACGACAAGGTGCGCCTCGTCCGGGAGCCGTCGCCGTCGAGGCCGCTGCCGGAAGGCGGCGACCTCAATCTCGGGGAGCTGCTCAAGTTCAAGTCGCAGGAGGGCGTGAGGGTGTGCCTGCTCGTGTGGGACGACAAGACGTCGCACGACAAGTTGTTCATCAAAACGGGTGGAGTGATGGCGACACATGATG ]
[+] EMBL AK100579 [ GCGGCGAGAGAGAGAGACTATTTTTGGGCGTAATCCAGCGCGGCCGTCCGCCCGAGATCTCCCTCTCCCACCGCGCGTTTCGCCGCCGGAATCCGCGCCGCAGAGAGCGGGGGGTATAAAGAGGTGAGACGGTGGTCTCCCGGATTCGGTGGGTGGTGGGTCCCGCTGCTGTGTGCGTGTGCGTGCCGAGGGAGGGAGGGAGGCCTCGTCGCCGCCGATGGAGTCGTCGGCCGGCGGCGGCGGCGGCGAGTCTCCGCCTCCGGCGAAGCCCGTGCTGCTCCACGGGGACCTCGACCTGTGGGTGGTCGAGGCGCGCCTGCTCCCAAACATGGACATGTTCTCCGAGCACGTACGGCGGTGCTTCGCCGCCTGCAAGCCGCCCACCTCCTGCGCCACCGCCAGGCAGCCGCGCCACGCCCGCGGCCACCACCGCCGGAAGATCATCACCAGCGACCCCTACGTCACGCTCTCCGTCGCCGGCGCCGTGGTGGCGCGCACCCGCGTCATCCCCAACGACCAGGACCCCGTCTGGGACGAGCGCTTCGCCGTGCCCCTCGCCCACTACGCCGCCGCGCTCGAGTTCCACGTCAAGGACAACGACACGTTCGGCGCGCAGCTCATCGGCACCGTCACCATCCCCGCCGACAGGGTCGCCTCGTGCCAGGAGGTGGAGGACTGGTTCCCCATCATCGGCAACAACGGCAGGCCGTACAAGCCCGACACGGCGCTCCGCCTCCGCCTCCGCTTCAACCCCGCGGCCGACAACCCGCTCTACCGCCGCGGCATCCCCGGCGACCCCGACCACCAGGGGATCAAGGACTCCTACTTCCCGCTCCGCCACGGCGGCCGCGTCACGCTGTACCAGGACGCCCACTACAGGGAAGGGGACCTGCCGGAGATCGAGCTCGACGAGGGGGGCAAGGTGTTCGACCACAACGCGTGCTGGGAGGACATCTGCCACGCCATCCTCGAGGCGCACCACATGATATACATCGTCGGCTGGTCGGTGTACGACAAGGTGCGCCTCGTCCGGGAGCCGTCGCCGTCGAGGCCGCTGCCGGAAGGCGGCGACCTCAATCTCGGGGAGCTGCTCAAGTTCAAGTCGCAGGAGGGCGTGAGGGTGTGCCTGCTCGTGTGGGACGACAAGACGTCGCACGACAAGTTGTTCATCAAAACGGGTGGAGTGATGGCGACACATGATGAAGAAACTAGAAAATTCTTCAAGCATTCCTCAGTCATTTGTGTTCTTTCACCTCGGTATGCCAGCAGTAAGCTGAGCATTTTCAAACAACAGGTTGTTGGGACTTTGTTTACCCATCATCAAAAATGCGTGCTGGTTGATACACAAGCTTGGGGAAACAAGCGGAAGATTACTGCTTTTATCGGTGGCCTGGATCTTTGTGATGGGCGTTATGATACACCCGAACATAGGCTTTTTAAGGATCTTGACACAGTATTCGATAATGATTATCATAACCCTACATTTCCGTCAGGTGCAAAGGGGGGGCCTAGACAACCATGGCATGACCTTCACTGTAGGATTGATGGTCCAGCTGCGTATGATGTCTTGAAAAATTTTGAGCAACGCTGGAGAAAGGCAACGAAATGGCGTGAACGATTTAGAAAAGTGTCTCATTGGAAAGATGATGCCCTGATAAAGTTGGAACGTATCTCATGGATACTTAGCCCTTCGCCTACTATTCCAAATGATGATATTAGTTTGCGGGTTTCAAAAGAAGAAGATCCTGAAAATTGGCATGTTCAGGTATTCCGGTCAATAGACTCTGGTTCGCTTAAAGGGTTTCCTAGTGATTGCAAAGAAGCTTCAAAGCAGAATCTTATTTGCCGGAAGGACCTGATAATTGATAAGAGCATCCACACTGCTTATGTCCGGGCAATCAGATCCGCCCAGCATTTCATTTATATTGAAAATCAATATTTCCTTGGGTCATCATATGCTTGGCCGTCCTATGTTAATTCAGGTGCTGACAATCTGGTACCTATTGAATTGGCCCTCAAAATTGCAAGCAAGATTAGGGCTGGTGAACGGTTTGCAGTTTATGTAGTCATACCGATGTGGCCTGAAGGAGTCCCTACAGCAGCTTCTGTACAAGAAATTCTTTTCTTTCAGACAATGGAGATGATGTATCGTATAATTGCACAAGAGCTCAAGGCCATGAATATTAAGAATGCACACCCTCAAGATTACTTGAACTTCTATTGTCTGGGCAATCGAGAAGAATCATCATCATCAAATGGCAGCCCTGAATCTAACGATAAAAGTGCAGCGGCCTTGGCTAGAAAATACCGGCGTTTTATGATCTATGTTCATGCAAAGGGGATGATTGTAGATGATGAATATGTTATTCTGGGGTCAGCAAACATCAACCAAAGATCTTTGGCTGGTTCCAGAGATACTGAAATTGCCATGGGCGCATACCAGCCTCACCACACATGGTCTACAAAGGGGGGTCATCCTCGCGGTCAGGTATACGGGTATAGAACTTCCCTCTGGGCAGAGCATCTTGGGATGGTTGATGACCTCTTCAAGGATCCATCAAGTTTGGAGTGTGTAAATTATGTCAATGAAATAGCAGAAGAGAACTGGAGAAGGTTCACCGCAGAACAACTTATAACGTTACAAGGGCACCTCCTCAAATACCCAGTCAAGGTAGAGGCTGACGGTAAGGTTGGTCCATTGCCAGAACACGAATGCTTTCCTGACGTTGGTGGCAAGATTCTTGGAGCTCCAACTTCACTCCCTGATACGCTAACAATGTAACACGGTTCAAGCAAAATATTGACATGTTTTCCAGAATTGAAGCCCTTTTTTGTTCATATTTTAAACTTTGTGATTGCTTGAAGATGGTATCGGAGAGGAATTTGTATCATGTCTGTATAATCATCCAGAGAGGGGGTATAGGGAGAGCTCAAGCTGCTAATGGTGTCTGTAAAGTTTGTGGCTATGTGAGAAATTTTTCAGCCGTTGTAAATGAAACACACGACAGTACGATAGACTACAGTGTTGTCTCATTTCCATTGCAATCATACACGCACAAC ]
[+] EMBL CB649048 [ CACAAGAGCTCAAGGCCATGAATATTAAGAATGCACACCCTCAAGATTACTTGAACTTCTATTGTCTGGGCAATCGAGAAGAATCATCATCATCAAATGGCAGCCCTGAATCTAACGATAAAAGTGCAGCGGCCTTGGCTAGAAAATACCGGCGTTTTATGATCTATGTTCATGCAAAGGGGATGATTGTAGATGATGAATATGTTATTCTGGGGTCAGCAAACATCAACCAAAGATCTTTGGCTGGTTCCAGAGATACTGAAATTGCCATGGGCGCATACCAGCCTCACCACACATGGTCTACAAAGGGGGGTCATCCTCGCGGTCAGGTATACGGGTATAGAACTTCCCTCTGGGCAGAGCATCTTGGGATGGTTGATGACCTCTTCAAGGATCCATCAAGTTTGGAGTGTGTAAATTATGTCAATGAAATAGCAGAAGAGAACTGGAGAAGGTTCACCGCAGAACAACTTATAACGTTACAAGGGCACCTCCTCAAATACCCAGTCAAGGTAGAGGCTGACGGTAAGGTTGGTCCATTGCCAGAACACGAATGCTTTCCTGACGTTGGTGGCAAGATTCTTGGAGCTCCAACTTCACTCCCTGATACGCTAACAATGTAACACGGTTCAAGCAAAATATTGACATGTTTTCCAGAATTGAAGCCCTTTTTTGTTCATATTTTAAACTTTGTGATTGCTTGAAGATGGTATCGGAGAGGAATTTGTATCATGTCTGTATAATCATCCAGAGAGGGGGTATAGGGAGAGCTCAAGCTGCTAATGGTGTCTGTNAAGTTT ]
[-] EMBL CB649049 [ CCCTGAATCTAACGATAAAAGTGCAGCGGCCTTGGCTAGAAAATACCGGCGTTTTATGATCTATGTTCATGCAAAGGGGATGATTGTAGATGATGAATATGTTATTCTGGGGTCAGCAAACATCAACCAAAGATCTTTGGCTGGTTCCAGAGATACTGAAATTGCCATGGGCGCATACCAGCCTCACCACACATGGTCTACAAAGGGGGGTCATCCTCGCGGTCAGGTATACGGGTATAGAACTTCCCTCTGGGCAGAGCATCTTGGGATGGTTGATGACCTCTTCAAGGATCCATCAAGTTTGGAGTGTGTAAATTATGTCAATGAAATAGCAGAAGAGAACTGGAGAAGGTTCCCCGCAGAACAACTTATAACGTTACAAGGGCACCTCCTCAAATACCCAGTCAAGGTAGAGGCTGACGGTAAGGTTGGTCCATTGCCAGAACACGAATGCTTTCCTGACGTTGGTGGCAAGATTCTTGGAGCTCCAACTTCCCTCCCTGATACGCTAACAATGTAACCCGGTTCAAGCAAAATATTGACATGTTTTCCAGAATTGAAGCCCTTTTTTGTTCATATTTTAAACTTTGTGATTGCTTGAAGATGGTATCGGAGAGGAATTTGTATCATGTCTGTATAATCATCCAGAGAGGGGGTATAGGGAGAGCTCAAGCTGCTAATGGTGTCGGTAAAGTTTGTGGCTATGTGAGAAATTTTTCAGCCGTTGTAAATGAAACTCAAAACAGTCCGATCCTTTAAAGTGTTGTCTCATTTCCCTT ]
[+] EMBL AK058661 [ CTTATAACGTTACAAGGGCACCTCCTCAAATACCCAGTCAAGGTAGAGGCTGACGGTAAGGTTGGTCCATTGCCAGAACACGAATGCTTTCCTGACGTTGGTGGCAAGATTCTTGGAGCTCCAACTTCACTCCCTGATACGCTAACAATGTAACACGGTTCAAGCAAAATATTGACATGTTTTCCAGAATTGAAGCCCTTTTTTGTTCATATTTTAAACTTTGTGATTGCTTGAAGATGGTATCGGAGAGGAATTTGTATCATGTCTGTATAATCATCCAGAGAGGGGGTATAGGGAGAGCTCAAGCTGCTAATGGTGTCTGTAAAGTTTGTGGCTATGTGAGAAATTTTTCAGCCGTTGTAAATGAAACACACGACAGTACGATAGACTACAGTGTTGTCTCATTTCCATTGCAATCATACACGCACAACT]
consensusID : consensus_9875#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 796 fasta sequence
[GGGCCTAGACAACCATGGCATGACCTTCACTGTAGGATTGATGGTCCAGCTGCATATGACGTCTTGAAAAATTTTGAGCAACGCTGGAGAAAGGCAACGAAATGGCGTGAACGATTTAGAAAAGTGTCTCATTGGAAAGATGATGCCCTGATAAAGTTGGAGCGGATCTCATGGATACTTAGCCCTTCGCCTACTATTCCAAATGATCATATTAGTTTGCGGGTTTCAAAAGAAGAAGATCCTGAAAATTGGCATGTTCAGGTGTTCCGGTCAATAGACTCTGGTTCGCTTAAAGGGTTTCCTAGTGATTGCAAAGAAGCTTCAAAGCAGAATCTTATTTGCCGGAAGGGCCTGATAATTGATAAGAGCATCCACACTGCTTATGTCCAGGCAATCAGATCCGCCCAGCATTTCATTTATATTGAAAATCAATATTTCCTTGGGTCATCATATGCTTGGCCGTCCTATGTTAATTCAGGTGCTGACAATCTGGTACCTATCGAATTGGCCCTCAAAATTGCAAGCAAGATTAGGGGCTGGTGAACGGTTTGCAGTTTATGTAGTCATACCGATGTGGCCTGAAGGAGTCGCTACAGCAGCTTCTGTGACAAGAATTTCTTTTCTTTTCAGGCCAGAACATGGGAGATAGGGGTTCGTATAATTGGACAAGGGCTCAGGGGCTTAATATTGAGAATGCGCCCCCTAAGATATTTGAACTTCTATTGGTTGGCGATCGAAAGAATATCTTCTTAAAGGGGGCCCTGATCTAACATAAAGGGCAGCGGCCTGGGTAAAA]
[+] EMBL BE040461 [GGGCCTAGACAACCATGGCATGACCTTCACTGTAGGATTGATGGTCCAGCTGCATATGACGTCTTGAAAAATTTTGAGCAACGCTGGAGAAAGGCAACGAAATGGCGTGAACGATTTAGAAAAGTGTCTCATTGGAAAGATGATGCCCTGATAAAGTTGGAGCGGATCTCATGGATACTTAGCCCTTCGCCTACTATTCCAAATGATCATATTAGTTTGCGGGTTTCAAAAGAAGAAGATCCTGAAAATTGGCATGTTCAGGTGTTCCGGTCAATAGACTCTGGTTCGCTTAAAGGGTTTCCTAGTGATTGCAAAGAAGCTTCAAAGCAGAATCTTATTTGCCGGAAGGGCCTGATAATTGATAAGAGCATCCACACTGCTTATGTCCAGGCAATCAGATCCGCCCAGCATTTCATTTATATTGAAAATCAATATTTCCTTGGGTCATCATATGCTTGGCCGTCCTATGTTAATTCAGGTGCTGACAATCTGGTACCTATCGAATTGGCCCTCAAAATTGCAAGCAAGATTAGGGGCTGGTGAACGGTTTGCAGTTTATGTAGTCATACCGATGTGGCCTGAAGGAGTCGCTACAGCAGCTTCTGTGACAAGAATTTCTTTTCTTTTCAGGCCAGAACATGGGAGATAGGGGTTCGTATAATTGGACAAGGGCTCAGGGGCTTAATATTGAGAATGCGCCCCCTAAGATATTTGAACTTCTATTGGTTGGCGATCGAAAGAATATCTTCTTAAAGGGGGCCCTGATCTAACATAAAGGGCAGCGGCCTGGGTAAAA]
consensusID : consensus_9875#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 410 fasta sequence
[CGCATACCAAGCCTCNCCAAACATGGTCTANAAAGGGGGGTCATCCTCGCGGTCAGGTATACGGGTATAGAACTTCCCTCTGGGCAGANCATCTTGGGATGGTTGATGACCTCTTCAAGGATCCATCAAGTTTGGAGTGTGTAAATTATGTCAATGAAATAGCAGAAGAGAACTGGAGAAGGTTCACCGCAGAACNACTTATAACGTTACAAGGGCACCTCCTCAAATACCCAGTCAAGGTANAGGCTGACGGTAAGGTTGGTCCATTGCCAGAACACGAATGCTTTCCTGACGTTGGTGGCAANATTCTTGGAGCTCCAACTTCACTCCCTGATACGCTAACAATGTAACACGGTTCAANCAAAATATTGACATNTTTTCCAGAATTGAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU058024 [CGCATACCAAGCCTCNCCAAACATGGTCTANAAAGGGGGGTCATCCTCGCGGTCAGGTATACGGGTATAGAACTTCCCTCTGGGCAGANCATCTTGGGATGGTTGATGACCTCTTCAAGGATCCATCAAGTTTGGAGTGTGTAAATTATGTCAATGAAATAGCAGAAGAGAACTGGAGAAGGTTCACCGCAGAACNACTTATAACGTTACAAGGGCACCTCCTCAAATACCCAGTCAAGGTANAGGCTGACGGTAAGGTTGGTCCATTGCCAGAACACGAATGCTTTCCTGACGTTGGTGGCAANATTCTTGGAGCTCCAACTTCACTCCCTGATACGCTAACAATGTAACACGGTTCAANCAAAATATTGACATNTTTTCCAGAATTGAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9875#0 GTTACGTCCCACCACCATCACGCTCACCGCTTCGCGATCTCTTTTACGATTAACCCCTCG 60
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 CAGAATTAGATATAGCGGCGCGGCGAGAGAGAGAGACTATTTTTGGGCGTAATCCAGCGC 120
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 GGCCGTCCGCCCGAGATCTCCCTCTCCCACCGCGCGTTTCGCCGCTGGAATCCGCGCCGC 180
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 AGAGAGCGGGGGGTATAAAGAGGTGAGACGGTGGTCTCCCGGATTCGGTGGGTGGTGGGT 240
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 CCCGCTGCTGTGTGCGTGTGCGTGCCGAGGGAGGGAGGGAGGCCTCGTCGCCGCCGATGG 300
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 AGTCGTCGGCCGGCGGCGGCGGCGGCGAGTCTCCGCCTCCGGCGAAGCCCGTGCTGCTCC 360
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 ACGGGGACCTCGACCTGTGGGTGGTCGAGGCGCGCCTGCTCCCAAACATGGACATGTTCT 420
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 CCGAGCACGTACGGCGGTGCTTCGCCGCCTGCAAGCCGCCCACCTCCTGCGCCACCGCCA 480
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 GGCAGCCGCGCCACGCCCGCGGCCACCACCGCCGGAAGATCATCACCAGCGACCCCTACG 540
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 TCACGCTCTCCGTCGCCGGCGCCGTGGTGGCGCGCACCCGCGTCATCCCCAACGACCAGG 600
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 ACCCCGTCTGGGACGAGCGCTTCGCCGTGCCCCTCGCCCACTACGCCGCCGCGCTCGAGT 660
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 TCCACGTCGAGGACAACGACACGTTCGGCGCGCAGCTCATCGGCACCGTCACCATCCCCG 720
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 CCGACAGGGTCGCCTCGTGCCAGGAGGTGGAGGACTGGTTCCCCATCATCGGCAACAACG 780
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 GCAGGCCGTACAAGCCCGACACGGCGCTCCGCCTCCGCCTCCGCTTCAACCCCGCGGCCG 840
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 ACAACCCGCTCTACCGCCGCGGCATCCCCGGCGACCCCGACCACCATGGGATCAAGGACT 900
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 CCTACTTCCCGCTCCGCCACGGCGGCCGCGTCACGCTGTACCAGGACGCCCACTACAGGG 960
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 AAGGGGACCTGCCGGAGATCGAGCTCGACGAGGGGGGCAAGGTGTTCGACCACAACGCGT 1020
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 GCTGGGAGGACATCTGCCACGCCATCCTCGAGGCGCACCACATGATATACATCGTCGGCT 1080
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 GGTCGGTGTACGACAAGGTGCGCCTCGTCCGGGAGCCGTCGCCGTCGAGGCCGCTGCCGG 1140
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 AAGGCGGCGACCTCAATCTCGGGGAGCTGCTCAAGTTCAAGTCGCAGGAGGGCGTGAGGG 1200
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 TGTGCCTGCTCGTGTGGGACGACAAGACGTCGCACGACAAGTTGTTCATCAAAACGGGTG 1260
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 GAGTGATGGCGACACATGATGAAGAAACTAGAAAATTCTTCAAGCATTCCTCAGTCATTT 1320
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 GTGTTCTTTCACCTCGGTATGCCAGCAGTAAGCTGAGCATTTTCAAACAACAGGTTGTTG 1380
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 GGACTTTGTTTACCCATCATCAAAAATGCGTGCTGGTTGATACACAAGCTTGGGGAAACA 1440
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 AGCGGAAGATTACTGCTTTTATCGGTGGCCTGGATCTTTGTGATGGGCGTTATGATACAC 1500
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 CCGAACATAGGCTTTTTAAGGATCTTGACACAGTATTCGATAATGATTATCATAACCCTA 1560
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 CATTTCCGTCAGGTGCAAAGGGGGGGCCTAGACAACCATGGCATGACCTTCACTGTAGGA 1620
consensus_9875#1 -----------------------GGGCCTAGACAACCATGGCATGACCTTCACTGTAGGA 37
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 TTGATGGTCCAGCTGCGTATGATGTCTTGAAAAATTTTGAGCAACGCTGGAGAAAGGCAA 1680
consensus_9875#1 TTGATGGTCCAGCTGCATATGACGTCTTGAAAAATTTTGAGCAACGCTGGAGAAAGGCAA 97
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 CGAAATGGCGTGAACGATTTAGAAAAGTGTCTCATTGGAAAGATGATGCCCTGATAAAGT 1740
consensus_9875#1 CGAAATGGCGTGAACGATTTAGAAAAGTGTCTCATTGGAAAGATGATGCCCTGATAAAGT 157
consensus_9875#2 -------------------------------------CGCATACCAAGCCTCNCCAAACA 23
* * * *** ***
consensus_9875#0 TGGAACGTATCTCATGGATACTTAGCCCTTCGCCTACTATTCCAAATGATGATATTAGTT 1800
consensus_9875#1 TGGAGCGGATCTCATGGATACTTAGCCCTTCGCCTACTATTCCAAATGATCATATTAGTT 217
consensus_9875#2 TGGTCTANA----AAGGGGGGTCATCCTCGCGGTCAGGTATACGGGT-ATAGAACTTCCC 78
*** * * ** * * ** ** * * * * ** * *
consensus_9875#0 TGCGGGTTTCAAAAGAAGAAGATCCTGAAAATTGGCATGTTCAGGTATTCCGG--TCAAT 1858
consensus_9875#1 TGCGGGTTTCAAAAGAAGAAGATCCTGAAAATTGGCATGTTCAGGTGTTCCGG--TCAAT 275
consensus_9875#2 TCTGGGC---------AGANCATCTTGGGA--TGGT-TGATGACCTCTTCAAGGATCCAT 126
* *** *** *** ** * *** ** * * * *** * ** **
consensus_9875#0 AGACTCTGGTTCGCTTAAAGGGTTTCCTAGTGATTGCAAAGAAGCTTCAAAGCAGAATCT 1918
consensus_9875#1 AGACTCTGGTTCGCTTAAAGGGTTTCCTAGTGATTGCAAAGAAGCTTCAAAGCAGAATCT 335
consensus_9875#2 CAAGTTTGGAGTGTGTAAATTATGTCAATGAAATAGCAGAAGAGAACTGGAGAAGGTTCA 186
* * *** * **** * ** * ** *** * ** ** ** **
consensus_9875#0 TATTTGCCGGAAGGACCTGATAATTGATAAGAGCATCCACACTGCTTATGTCCGGGCAAT 1978
consensus_9875#1 TATTTGCCGGAAGGGCCTGATAATTGATAAGAGCATCCACACTGCTTATGTCCAGGCAAT 395
consensus_9875#2 C----CGCAGAACNACTTATAACGTTACAAGGGCACCT---CCTCAAATACCCAGTCAAG 239
* *** * * * * * *** *** * * * ** ** * ***
consensus_9875#0 ---CAGATCCGCCCAGCATTTCATTTATATT--GAAAATCAATATTTCCTTG-----GGT 2028
consensus_9875#1 ---CAGATCCGCCCAGCATTTCATTTATATT--GAAAATCAATATTTCCTTG-----GGT 445
consensus_9875#2 GTANAGGCTGACGGTAAGGTTGGTCCATTGCCAGAACACGAATGCTTTCCTGACGTTGGT 299
** * ** * ** *** * *** ** * ** ***
consensus_9875#0 CATCATATGCTTGGCCGTCCTATGTTAATTC---AGGTGCTGACAATCTGGTACCTATTG 2085
consensus_9875#1 CATCATATGCTTGGCCGTCCTATGTTAATTC---AGGTGCTGACAATCTGGTACCTATCG 502
consensus_9875#2 GGCAANATTCTTGGAGCTCCAACTTCACTCCCTGATACGCTAACAATGTAACACGGTTCA 359
* ** ***** *** * * * * * * *** ***** * ** *
consensus_9875#0 AATTGGCCCTCAAAATTGCAAGCAAGATTAGGG-CTGGTGAACGGTTTGCAGTTTATGTA 2144
consensus_9875#1 AATTGGCCCTCAAAATTGCAAGCAAGATTAGGGGCTGGTGAACGGTTTGCAGTTTATGTA 562
consensus_9875#2 ANCAAAATATTGACATNTTTTCCAGAATTGAAAAAAAAAAAAAAAAAAAAA--------- 410
* * * ** ** *** ** *
consensus_9875#0 GTCATACCGATGTGGCCTGAAGGAGTCCCTACAGCAGCTTCTGT-ACAAGAAATTCTTTT 2203
consensus_9875#1 GTCATACCGATGTGGCCTGAAGGAGTCGCTACAGCAGCTTCTGTGACAAGAATTTCTTTT 622
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 CTTTC-------AGACAATGGAGATGATGTATCGTATAATTGCACAAGAGCTCAAGGCCA 2256
consensus_9875#1 CTTTTCAGGCCAGAACATGGGAGATAGGGGTTCGTATAATTGGACAAGGGCTCAGGGGC- 681
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 TGAATATTAAGAATGCACACCCTCAAGATTACTTGAACTTCTATTGTCTGGGCAATCGAG 2316
consensus_9875#1 TTAATATTGAGAATGCGC-CCCCTAAGAT-ATTTGAACTTCTATTGGTTGG-CGATCGA- 737
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 AAGAATCATCATCATCAAATGGCAGCCCTGAATCTAACGATAAAAGTGCAGCGGCCTTGG 2376
consensus_9875#1 AAGAAT-ATCTTCTT--AAAGGGGGCCCTGA-TCTAAC-ATAAAGG-GCAGCGGCCTGGG 791
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 CTAGAAAATACCGGCGTTTTATGATCTATGTTCATGCAAAGGGGATGATTGTAGATGATG 2436
consensus_9875#1 TAAAA------------------------------------------------------- 796
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 AATATGTTATTCTGGGGTCAGCAAACATCAACCAAAGATCTTTGGCTGGTTCCAGAGATA 2496
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 CTGAAATTGCCATGGGCGCATACCAGCCTCACCACACATGGTCTACAAAGGGGGGTCATC 2556
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 CTCGCGGTCAGGTATACGGGTATAGAACTTCCCTCTGGGCAGAGCATCTTGGGATGGTTG 2616
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 ATGACCTCTTCAAGGATCCATCAAGTTTGGAGTGTGTAAATTATGTCAATGAAATAGCAG 2676
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 AAGAGAACTGGAGAAGGTTCACCGCAGAACAACTTATAACGTTACAAGGGCACCTCCTCA 2736
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 AATACCCAGTCAAGGTAGAGGCTGACGGTAAGGTTGGTCCATTGCCAGAACACGAATGCT 2796
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 TTCCTGACGTTGGTGGCAAGATTCTTGGAGCTCCAACTTCACTCCCTGATACGCTAACAA 2856
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 TGTAACACGGTTCAAGCAAAATATTGACATGTTTTCCAGAATTGAAGCCCTTTTTTGTTC 2916
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 ATATTTTAAACTTTGTGATTGCTTGAAGATGGTATCGGAGAGGAATTTGTATCATGTCTG 2976
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 TATAATCATCCAGAGAGGGGGTATAGGGAGAGCTCAAGCTGCTAATGGTGTCTGTAAAGT 3036
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 TTGTGGCTATGTGAGAAATTTTTCAGCCGTTGTAAATGAAACACACGACAGTACGATAGA 3096
consensus_9875#1 ------------------------------------------------------------
consensus_9875#2 ------------------------------------------------------------
consensus_9875#0 CTACAGTGTTGTCTCATTTCCATTGCAATCATACACGCACAACT 3140
consensus_9875#1 --------------------------------------------
consensus_9875#2 --------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||