These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_473#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 462 fasta sequence [AGATCACGACAAAGGCACTTTTACTGACTTGATTCTCAATACACGTAAAATACAACTTTTAAAAACAGCAAAAGGAGACAGTGTAAACAGACTGGTTTCTCCTGTTCAATGCCCACCAATCACGTGTCTCCCCTTGAGTTACAGGATAAGAACATGGTTATTCTTTATTAAAAAAAAAAAAAAAAAAGAGAGAGAGAAAGCCGATTCACGTCACAGGATAAAGATCCACGTAGCTCATGTGATACCCGCGATGGCCACAAGATGGCGCCATAGTTGCTACACAAATCTGCGCTGCAGCGCAAACACAGGTTCAGGTCCCGGAGGTACGTTCAGGAGCAGGGAAAATCAGGGTGTGGCGTCAGATGGTTTAAGACAGCAGATCTTTACAATATCTTTAGTTATTTTCAGGATGTGAACCAATGTAGAACTTTGGGACAGCCAAACCAGAGCCAGGTCAACTCC] [+] EMBL CA332170 [AGATCACGACAAAGGCACTTTTACTGACTTGATTCTCAATACACGTAAAATACAACTTTTAAAAACAGCAAAAGGAGACAGTGTAAACAGACTGGTTTCTCCTGTTCAATGCCCACCAATCACGTGTCTCCCCTTGAGTTACAGGATAAGAACATGGTTATTCTTTATTAAAAAAAAAAAAAAAAAAGAGAGAGAGAAAGCCGATTCACGTCACAGGATAAAGATCCACGTAGCTCATGTGATACCCGCGATGGCCACAAGATGGCGCCATAGTTGCTACACAAATCTGCGCTGCAGCGCAAACACAGGTTCAGGTCCCGGAGGTACGTTCAGGAGCAGGGAAAATCAGGGTGTGGCGTCAGATGGTTTAAGACAGCAGATCTTTACAATATCTTTAGTTATTTTCAGGATGTGAACCAATGTAGAACTTTGGGACAGCCAAACCAGAGCCAGGTCAACTCC] consensusID : consensus_473#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 316 fasta sequence [TAAAAAAAAGACTAATCGGTACCAAAAAAAAAAAGAGAGAGAGAGAAACCCGATTCACGTCACAGGATAAAGATCCACGTAGCTCATGTGATACCCGCGATGGCCACAAGATGGCGCCATAGTTGCCACACAAATCAGCGCTGCAGCGCAAACACAGGTTCAGGTCCCGGAGGTACGTTCAGGAGCAGGGAAAATCAGGGTGTGGCGTCAGATGGTTTAAGACAGCAGATCTTCACAATATCTTTAGTTATTTTCAGGATGTGAACCAATGTAGAACTTTGGGACAGCCTAATCAGAGCCAGGTCAGGTGGCACCA] [-] EMBL FR0057233 [TAAAAAAAAGACTAATCGGTACCAAAAAAAAAAAGAGAGAGAGAGAAACCCGATTCACGTCACAGGATAAAGATCCACGTAGCTCATGTGATACCCGCGATGGCCACAAGATGGCGCCATAGTTGCCACACAAATCAGCGCTGCAGCGCAAACACAGGTTCAGGTCCCGGAGGTACGTTCAGGAGCAGGGAAAATCAGGGTGTGGCGTCAGATGGTTTAAGACAGCAGATCTTCACAATATCTTTAGTTATTTTCAGGATGTGAACCAATGTAGAACTTTGGGACAGCCTAATCAGAGCCAGGTCAGGTGGCACCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_473#0 AGATCACGACAAAGGCACTTTTACTGACTTGATTCTCAATACACGTAAAATACAACTTTT 60 consensus_473#1 ------------------------------------------------------------ consensus_473#0 AAAAACAGCAAAAGGAGACAGTGTAAACAGACTGGTTTCTCCTGTTCAATGCCCACCAAT 120 consensus_473#1 ------------------------------------------------------------ consensus_473#0 CACGTGTCTCCCCTTGAGTTACAGGATAAGAACATGGTTATTCTTTATTAAAAAAAAAAA 180 consensus_473#1 --------------------------TAAAAAAAAGACTAATCGGTACCAAAAAAAAAAA 34 *** ** * * ** ** ** *********** consensus_473#0 AAAAAAAGAGAGAGAGAAAGCCGATTCACGTCACAGGATAAAGATCCACGTAGCTCATGT 240 consensus_473#1 GA-----GAGAGAGAGAAACCCGATTCACGTCACAGGATAAAGATCCACGTAGCTCATGT 89 * ************ **************************************** consensus_473#0 GATACCCGCGATGGCCACAAGATGGCGCCATAGTTGCTACACAAATCTGCGCTGCAGCGC 300 consensus_473#1 GATACCCGCGATGGCCACAAGATGGCGCCATAGTTGCCACACAAATCAGCGCTGCAGCGC 149 ************************************* ********* ************ consensus_473#0 AAACACAGGTTCAGGTCCCGGAGGTACGTTCAGGAGCAGGGAAAATCAGGGTGTGGCGTC 360 consensus_473#1 AAACACAGGTTCAGGTCCCGGAGGTACGTTCAGGAGCAGGGAAAATCAGGGTGTGGCGTC 209 ************************************************************ consensus_473#0 AGATGGTTTAAGACAGCAGATCTTTACAATATCTTTAGTTATTTTCAGGATGTGAACCAA 420 consensus_473#1 AGATGGTTTAAGACAGCAGATCTTCACAATATCTTTAGTTATTTTCAGGATGTGAACCAA 269 ************************ *********************************** consensus_473#0 TGTAGAACTTTGGGACAGCCAAACCAGAGCCAGGTCAACTCC----- 462 consensus_473#1 TGTAGAACTTTGGGACAGCCTAATCAGAGCCAGGTCAGGTGGCACCA 316 ******************** ** ************* * |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |