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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10105#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 23 consensus length = 1618 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCG-GCCCGCATCCCGGATGATAATGTTGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT-CATT--GC-AAG-CACT--GCT--GGC--A-GCTGCTGAGCCGGACGATCCACA-GGATGCGGTCGTTGCTACGCAGTACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT-GGACCAACGTGTATGCAGGTGGTCCGTTTGCAAATGCCGATTTTGATCAGAAGGTTCAACGATTGCGTGATATGGGTATCCCGGCGTACGATGCCCGAGCCGCCCTTTCACGCCACAAC-TGGCATC-T-GGAACGTGCGTCTGAACAGCTATTCAGTTAGTCTCTTTGTGGGTAATGTTCGACCGCCTCCCGCCCCCATACTCGATGTTTTTATTTGTGTTTTCCTTTGCAAATGACGTG-TTTTTTTTCTCGTAGCCAGGGTATTCCTTTTTAAATACAGAAAAGTGCGTTTTCGTGAAGTTTTAAATTAAACCGTTCTCTTAATGATCCAAAGTACCGTTGGAAACGTTAGCAACTGATACAAATGTTACATGTTTTGTGATATCATCAATCAGTAACCTTCGGTAAGTTTTTGTTTTCTGCTGGAATACACAAATACAGAACCACCGTCATTTCGCAACCGAGGATTG-TTTTTCCATAATGTATGTATACTATACTATCATAAAAGAATGGATCGAAACCAAGCAAATGAGCAATACATGGCTTACAACGTGAAAAGACAGCTTAAATTATATTGCGTTGGTGCAAAGATAACTATTAGTGGTTGTTAGTATGAGGAAACGCATGGAAAGGAGCACAGTAAAGAGAACTGTGAATGAAAATCGATAAAGCTAAACACAC--TTTCATTGCCGTAATCCTTCCTGGGGTTGTACAGAAACCTAGTGCACACGTTTGGTAGAAAAAG-AAATAAACCAATCCAACAACACACAAAGCTCGACTCTTTTGAAAACAAGTTAGCAGCAACTGAGTTATTCGCTCATTCCATTCCGTTCGTAAAGAAAATACTTGGCAAAGAGCAATTATTACGGCTGCAAATAAAGTAAAACTAAAAAGATCGTTTCAAATGTAAAAAAAA]
[+] EMBL BM625125 [CCGCCCACGCGTCCGCCCACGCGTCCG GCCCGCATCCCGGATGATAATGTTGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAGCCGGACGATCCACA GGATGCGGTCGTTGCTACGCAGTACA ]
[+] EMBL BM646199 [ CCGAGCCCGCATCCCGGATGATAATGTTGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAATTACCCAGAGTCATA CCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACAGCCACATAGCTTCCGAGATTTACTGCATAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAGCCGGACGATCCACAGGGATGCGGTCGTTGCTACGCAGTACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATTGGGACCAACGTGTATGCAGGTGGTCCGTTTGCAA ]
[+] EMBL CNS08TOR [ aaaactctc GCGCGCATCCCGGATGATAATGTTGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCATAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAACCGGACGATCCACA GGATGCGGTCGTTGCTACGC GTACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAACGTGTATGCAGGTGGTCCGTTTGCAAATGCCGATTTTGATCAGAAGGTTCAACGATTGCGTGATATGGGTATCCCGGCGTACGATGCCCGAGCCGCCCTTTCACGCCACAAC TGGCATCTT GGAACGTGCGTTTGAACAGCTATTCAGTTAGTCTCTTTGTGGGTAATGTTCGACCGCCTCCCGCCCCCATACTCGATGTTT ]
[+] EMBL BM581956 [ CCGGGATGATAATGTTGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAGCCGGACGATCCACA GGATGCGGTCGTTGCTACGCAGTACAAAGACAACCACGAAATGTTCATCCTGACGG ]
[+] EMBL BM588920 [ CCGGGATGATAATGTTGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAATTACCCAGAGTCATA CCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACAGCCACATAGCTTCCGAGATTTACTGCATAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAGCCGGACGATCCACAGGGATGCGGTCGTTGCTACGCAGTACAAAGACCACCACGAAATGTTCATCCTGA ]
[+] EMBL CNS08JAA [ CCGGATGATAATGTTGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCATAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAACCGGACGATCCACA GGATGCGGTCGTTGCTACGCA TACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAACGTGTATGCAGGTGGTCCGTTTGCAAATGCCGATTTTGATCAGAATGTTCA ]
[+] EMBL CNS090JB [ ATAATGTTGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCATAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAACCGGACGATCCACA GGATGCGGTCGTTGCTACGCAG ACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAACGTGTATGCAGGTGGTCCGTTTGCAAATGCCGATTTTGATCAGAAGGTTCAACGATTGCGTGATATGGGTATCCCGGCGTACGATGCCCGAGCCGCCCTTTCACGCCACAAC TGGCATC T TGAACG ]
[+] EMBL BM603547 [ ccgGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAGCCGGACGATCCACAGGGATGCGGTCGTTGCTACGCAGTACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAACGTGTATGCAGGTGGTC ]
[+] EMBL BM586302 [ ccgGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAGCCGGACGATCCACA GGATGCGGTCGTTGCTACGCAGTACGAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAAC ]
[+] EMBL BM632908 [ ccgCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAGCCGGACGATCCACA GGATGCGGTCGTTGCTACGCAGTACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAACGTGTATGCAGGTGGTCCGTTTGCAAATGC ]
[+] EMBL BX623797 [ CATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCATAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTGACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AA ]
[+] EMBL BX625359 [ AAAGTGAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGTTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAGCCGGACGATCCACA GGATGCGGTCGTTGCTACGCAGTACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAACGTGTATGCAGGTGGTCCGTTTGCAAATGCCGATTTTGATCAGAANGTTCAACGATTGCGGGATATGGGTATCCCGGCGTACGATGCCCGAGCCGCCCTTTCACGCCACAAC TGGCATC TGGGAACGTGCGTCTGAACAGCTATTCAGTTAGTCTCTTTGTGGGTAATGTTCGACCGCCTCCCGCCCCCATACTCGA ]
[+] EMBL AGA284735 [ AAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A ]
[-] EMBL CNS08TOS [ ATTTACTGCATAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCCCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGAATGGTGCGATTTGTCTCGACATACTAAAAGAAAATTGGGCTGCTGCGATGAACCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAACCGGACGATCCACA GGATGCGGTCGTTG TACGCAGTACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAACGTGTATGCAGGTGGTCCGTTTGCAAATGCCGATTTTGATCAGAAGGTTCAACGATTGCGTGATATGGGTATCCCGGCGTACGATGCCCGAGCCGCCCTTTCACGCCACAAC TGGCATC T GGAACGTGCGTCTGAACAGCTATTCAGTTAGTCTCTTTGTGGGTAATGTTCGACCGCCTCCCGCCCCCATACTCGATGTTTTTATTTGTGTTTTCCTTTGCAAATGACGTG TTTTTTTTCTCGTAGCCAGGGTATTCCTTTTTAAATACAGAAAAGTGCGTTTTCGTGAAGTTTTAAATTAAACCGTTCTCTTAATGATCCAAAGTACCGTTGGAAACGTTAGCAACTGATACAAATGTTACATGTTT ]
[+] EMBL BX606479 [ ACAACTTTATGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAACCGGACGATCCACA GGATGCGGTCGTTGCTACGCAGTACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAACGTGTATGCAGGTGGTCCGTTTGCAAATGCCGATTTTGATCAGAAGGTTCAACGATTGCGTGATATGGGTATCCCGGCGTACGATGCCCGAGCCGCCCTTTCACGCCACAAC TGGCATC T GGAACGTGCGTCTGAACAGCTATTCAGTTAGTCTCTTTGTGGGTAATGTTCGACCGCCTCCCGCCCCCATACTCGATGTTTTTATTTGTGTTTTCCTTTGCAAATGACGTG TTTTTTTTCTCGTAGCCAGGGTATTCCTTTTTAAATACAGAAAAGTGCGTTTTCGTGAAGTTTTAAATTAAACCGTTCTCTTAATGATCCAAAGTACCGTTGGAAACGTTAGCAACTGATACAAATGTTACATGTTTTGTGATATCATCAATCAGTAACCTTCGGTAAGTTTTTGTTTTCTGCTGGAATACACAAATACAGAACCACCGTCATTTCGCAACCGAGGATTG TTTTTCCATAATGTATGTATACTATACTATCATAAAAGAATGGATCGAAACCAAGCAAATGAGCAATACATGG ]
[+] EMBL BM621010 [ ccgTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAGCCGGACGATCCACA GGATGCGGTCGTTGCTACGCAGTACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAACGTGTATGCAGGTGGTCCGTTTGCAAATGCCGATTTTGATCAGAAGGTTCAACGATTGCGTGA ]
[+] EMBL BM604713 [ ccGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTATCCATTTGGCAAAGCCACTTGGCTTGGGCCAAGGCTGCTGAGCCGGACGATCCACA GGATGCGGTCGTTGCTACGCAGTACAAAGACAACCACGAAA ]
[-] EMBL CNS090JC [ CGATTTGTATCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAACCGGACGATCCACA GGATGCGGTCGTTG TACGCAGTACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAACGTGTATGCAGGTGGTCCGTTTGCAAATGCCGATTTTGATCAGAAGGTTCAACGATTGCGTGATATGGGTATCCCGGCGTACGATGCCCGAGCCGCCCTTTCACGCCACAAC TGGCATC A GGAACGTGCGTCTGAACAGCTATTCAGTTAGTCTCTTTGTGGGTAATGTTCGACCGCCTCCCGCCCCCATACTCGATGTTTTTATTTGTGTTTTCCTTTGCAAATGACGTG TTTTTTTTCTCGTGGCCAGGGTATTCCTTTTTAAATACAGAAA ]
[-] EMBL CNS08JAB [ CGATCCACA GGATGCGGTCGTTG TACGCAGTACAAAGAAAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAACGTGTATGCAGGTGGTCCGTTTGCAAATGCCGATTTTGATAAGAAGGTTCAACGATTGCGTGATATGGGTATCCCGGCGTACGATGCCCGAGCCGCCCTTTCACGCCACAAC TGGCATC T GGGACGTGCGTCTGAACAGCTATTCAGTTAGTCTCTTTGTGGGTAATGTTCGACCGCCTCCCGCCCCCATACTCGATGTTTTTATTTGTGTTTTCCTTTGCAAATGACGTG TTTTTTTTCTCGTAGCCAGGGTATTCCTTTTTAAATACAGAAAAGTGCGTTTTCGTGAAGTTTTAAATTAAACCGTTCTCTTAATGATCCAAAGTACCGTTGGAAACGTTAGCAACTGATACAAATGTTACATGTTTTGT ]
[-] EMBL CNS08ICS [ CCGGCGTACGATGCCCGAGCCGCCCTTTCACGCCACAACTTGGCATT T GGAACGTGCGTCTGAACAGCTATTCAGTTAGTCTCTTTTTGGGTAATGTTCGACCGCCTCCCGCCCCCATACTCGATGTTTTTATTTGTGTTTTCCTTTGCAAATGACGTGTTTTTTTTTCTCGTAGCCAGGGTATTCCTTTTTAAATACAGAAAAGTGCGTTTTCGTGAAGTTTTAAATTAAACCGTTCTCTTAATGATCCAAAGTACCGTTGGAAACGTTAGCAACTGATACAAATGTTACATGTTTTGTGATATCATCAATCAGT ACCTTCGGTAAGTTTTTGTTTTCTGCTGGA ]
[+] EMBL BX608034 [ AACAGCTATTCAGTTAGTCTCTTTGTGGGTAATGTTCGACCGCCTCCCGCCCCCATACTCGATGTTTTTATTTGTGTTTTCCTTTGCAAATGACGTG TTTTTTTTCTCGTAGCCAGGGTATTCCTTTTTAAATACAGAAAAGTGCGTTTTCGTGAAGTTTTCAATTAAACCG TGATCCAAAGTACCGTTGGAAACGTTAGCAACTGATACAAATGTTACATGTTTTGTGATATCATCAATCAGTAAACTTCGGTAAGTTTTTGTTTTCTGCTGGAATACACAAATACAGAACCACCGTCATTTCGCAACCGAGGATTGTTTTTTCCATAATGTATGTATACTATACTATCATAAAAGAATGGATCGAAACCAAGCAAATGAGCAATACATGGCTTACAACGTGAAAAGACAGCTTAAATTATATTGCGTTGGTGCAAAGATAACTATTAGTGGTTGTTAGTATGAGGAAACGCATGGAAAGGAGCACAGTAAAGAG ]
[-] EMBL AGA283439 [ TTACAACGTGAAAAGACAGCTTAAATTATATTGCGTTGGTGCAAAGATAACTATTAGTGGTTGTTAGTATGAGGAAACGCATGGAAAGGAGCACAGTAAAGAGAACTGTGAATGAAAATCGATAAAGCTAAACACAC TTTCATTGCCGTAATCCTTCCTGGGGTTGTACAGAAACCTAGTGCACACGTTTGGTAGAAAAAG AAATAAACCAATCCAACAACACACAAAGCTCGACTCTTTTGAAAACAAGTTAGCAGCAACTGAGTTATTCGCTCATTCCATTCCGTTCGTAAAGAAAATACTTGGCAAAGAGCAATTATTACGGCTGCAAATAAAGTAAAACTAAAAAGATCGTTTCAAATGTAAAAAAAA]
[+] EMBL CNS08LKI [ AGAACTGTGAATG AAATCGATAAAGCTAAAAACACTTTTTCATTGCCGTAATCCTTCCTCGGGTTGTACAGAAACCTAGTGCACACATTTGGTAGAAAAAGCAAATAAACCAATCCAACAACACACAAAGCTCGGCTCTTTTGAAAACAAGTTAGCAGCAACTGAGTTATTCGCT CATTCCGTTCGTAAAGAAAATACTTGGCAAAGAGCAATTATTACGGCTACAAATAAAGTAAAACAAAAAA ]
consensusID : consensus_10105#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 657 fasta sequence
[CCGAAGCACCCAAAAAGAAACCAGCAGCCCGCATCCCGGATGATAATGTTGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACC-ACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTAACAAGAACACCGGCATCAGCGATGATAATAAACGCGTAGAGAGTGAGAGAGAGTAGGAGACAAACAGAGAAGTAAAAACGTGCTTAATTTTCTAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGGTGCGATTTGTCTCGACATACTAAAAGACAAT]
[+] EMBL BM607832 [CCGAAGCACCCAAAAAGAAACCAGCAGCCCGCATCCCGGATGATAATGTTGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACC ACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTAACAAGAACACCGGCATCAGCGATGATAATAAACGCGTAGAGAGTGAGAGAGAGTAGGAGACAAACAGAGAAGTAAAAACGTGCTTAATTTTCTAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGGTGCGATTTGTCTCGACATACTAAAAGACAAT]
[+] EMBL CNS08ICR [ AAAACAGCAG CCGCAT CCGGATGATAATGTTGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCATAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCAACCCGACACGCCATACGAA GAGG AAGTTTGTGTTAGAAATAAA ]
[+] EMBL AL932526 [ cgaggTCACATCTTCTGTTGGT ATACATTGAGACGAAAGT AACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGTTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACC ACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGT ]
consensusID : consensus_10105#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 298 fasta sequence
[CCGAGGTTATATGCCGCAGCGTTATCATCTACCTCGTTACTCGCCAGAAAAATACAAAAATACGGGCACATAGCTTCCGAGATTTACTGGCAAACATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGGGAATATGGGAGTATTCCGCATCTAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGGTGGACACCGAACGCCATACGAAGGAGGAAAGTTTGTGT]
[+] EMBL AL930630 [CCGAGGTTATATGCCGCAGCGTTATCATCTACCTCGTTACTCGCCAGAAAAATACAAAAATACGGGCACATAGCTTCCGAGATTTACTGGCAAACATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGGGAATATGGGAGTATTCCGCATCTAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGGTGGACACCGAACGCCATACGAAGGAGGAAAGTTTGTGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10105#1 ---CCGAAGCACCCAAAAAGAAACCAGCAGCCCGCATCCCGGATGATAATGTTGTTGGAT 57
consensus_10105#2 ------------------------------------------------------------
consensus_10105#0 CCGCCCACGCGTCCGCCCACGCGTC--CGGCCCGCATCCCGGATGATAATGTTGTTGGAT 58
consensus_10105#1 CAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATC 117
consensus_10105#2 ------------------------------------------------------------
consensus_10105#0 CAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATC 118
consensus_10105#1 AGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAG 177
consensus_10105#2 ---------CCGAGGTTATA--TGCCGC-AGCGTTATCATCTACC-TCGTTACTCGCCAG 47
consensus_10105#0 AGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAG 178
** ** *** ****** **************** *** **********
consensus_10105#1 AAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGC 237
consensus_10105#2 AAAAATACAAAAA-TACGGGCACATAGCTTCCGAGATTTACTG-GCAAACATCATCTAGC 105
consensus_10105#0 AAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGC 238
************* ***** *********************** *** ***********
consensus_10105#1 AGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATC-AAAAGAGA 296
consensus_10105#2 AGAGGAACACCGTACTGTGTAACTATGGGGAATATGGGAGTATTCCGCATCTAAAAGAGA 165
consensus_10105#0 AGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATC-AAAAGAGA 297
**************************** ******** ***** ******* ********
consensus_10105#1 GTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGT 356
consensus_10105#2 GTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAA-TGGT 224
consensus_10105#0 GTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGT 357
******************************************************* ****
consensus_10105#1 AAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGA 416
consensus_10105#2 AAATGACAACTTTACGGAACTGAGGGGCGAGATTGGTGGACA--CCGA-ACGCCATACGA 281
consensus_10105#0 AAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGA 417
*********************************** ***** **** ***********
consensus_10105#1 AGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAA 476
consensus_10105#2 AGGAGGAAAGTTTGTGT------------------------------------------- 298
consensus_10105#0 AGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAA 477
*****************
consensus_10105#1 GGTAACAAGAAC-ACCGGCATCAGCGATGATAATAAACGCGTAGAGAGTGAGAGAGAGTA 535
consensus_10105#2 ------------------------------------------------------------
consensus_10105#0 GGTGAAATTTGTGACAAAAATATGGCATCCTAACAT-CTCGTCTGTGACTGGTGCGATTT 536
consensus_10105#1 GGA--GACAAACAGAGAAGTAAAAACG-TGCT----TAATTTTCTAGGTGAAATTTGTGA 588
consensus_10105#2 ------------------------------------------------------------
consensus_10105#0 GTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT 596
consensus_10105#1 CAA---AAATA----TGGCATCCTAACATCTCGTCTGTG-ACTGGGTGCGATTTGTCTCG 640
consensus_10105#2 ------------------------------------------------------------
consensus_10105#0 CATTGCAAGCACTGCTGGCAGCTGCTGAGCCGGACGATCCACAGGATGCGGTC-GTTGCT 655
consensus_10105#1 ACATACTA-AAAGACAAT------------------------------------------ 657
consensus_10105#2 ------------------------------------------------------------
consensus_10105#0 ACGCAGTACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATTGGACCAACGTG 715
consensus_10105#1 ------------------------------------------------------------
consensus_10105#2 ------------------------------------------------------------
consensus_10105#0 TATGCAGGTGGTCCGTTTGCAAATGCCGATTTTGATCAGAAGGTTCAACGATTGCGTGAT 775
consensus_10105#1 ------------------------------------------------------------
consensus_10105#2 ------------------------------------------------------------
consensus_10105#0 ATGGGTATCCCGGCGTACGATGCCCGAGCCGCCCTTTCACGCCACAACTGGCATCTGGAA 835
consensus_10105#1 ------------------------------------------------------------
consensus_10105#2 ------------------------------------------------------------
consensus_10105#0 CGTGCGTCTGAACAGCTATTCAGTTAGTCTCTTTGTGGGTAATGTTCGACCGCCTCCCGC 895
consensus_10105#1 ------------------------------------------------------------
consensus_10105#2 ------------------------------------------------------------
consensus_10105#0 CCCCATACTCGATGTTTTTATTTGTGTTTTCCTTTGCAAATGACGTGTTTTTTTTCTCGT 955
consensus_10105#1 ------------------------------------------------------------
consensus_10105#2 ------------------------------------------------------------
consensus_10105#0 AGCCAGGGTATTCCTTTTTAAATACAGAAAAGTGCGTTTTCGTGAAGTTTTAAATTAAAC 1015
consensus_10105#1 ------------------------------------------------------------
consensus_10105#2 ------------------------------------------------------------
consensus_10105#0 CGTTCTCTTAATGATCCAAAGTACCGTTGGAAACGTTAGCAACTGATACAAATGTTACAT 1075
consensus_10105#1 ------------------------------------------------------------
consensus_10105#2 ------------------------------------------------------------
consensus_10105#0 GTTTTGTGATATCATCAATCAGTAACCTTCGGTAAGTTTTTGTTTTCTGCTGGAATACAC 1135
consensus_10105#1 ------------------------------------------------------------
consensus_10105#2 ------------------------------------------------------------
consensus_10105#0 AAATACAGAACCACCGTCATTTCGCAACCGAGGATTGTTTTTCCATAATGTATGTATACT 1195
consensus_10105#1 ------------------------------------------------------------
consensus_10105#2 ------------------------------------------------------------
consensus_10105#0 ATACTATCATAAAAGAATGGATCGAAACCAAGCAAATGAGCAATACATGGCTTACAACGT 1255
consensus_10105#1 ------------------------------------------------------------
consensus_10105#2 ------------------------------------------------------------
consensus_10105#0 GAAAAGACAGCTTAAATTATATTGCGTTGGTGCAAAGATAACTATTAGTGGTTGTTAGTA 1315
consensus_10105#1 ------------------------------------------------------------
consensus_10105#2 ------------------------------------------------------------
consensus_10105#0 TGAGGAAACGCATGGAAAGGAGCACAGTAAAGAGAACTGTGAATGAAAATCGATAAAGCT 1375
consensus_10105#1 ------------------------------------------------------------
consensus_10105#2 ------------------------------------------------------------
consensus_10105#0 AAACACACTTTCATTGCCGTAATCCTTCCTGGGGTTGTACAGAAACCTAGTGCACACGTT 1435
consensus_10105#1 ------------------------------------------------------------
consensus_10105#2 ------------------------------------------------------------
consensus_10105#0 TGGTAGAAAAAGAAATAAACCAATCCAACAACACACAAAGCTCGACTCTTTTGAAAACAA 1495
consensus_10105#1 ------------------------------------------------------------
consensus_10105#2 ------------------------------------------------------------
consensus_10105#0 GTTAGCAGCAACTGAGTTATTCGCTCATTCCATTCCGTTCGTAAAGAAAATACTTGGCAA 1555
consensus_10105#1 ------------------------------------------------------------
consensus_10105#2 ------------------------------------------------------------
consensus_10105#0 AGAGCAATTATTACGGCTGCAAATAAAGTAAAACTAAAAAGATCGTTTCAAATGTAAAAA 1615
consensus_10105#1 ---
consensus_10105#2 ---
consensus_10105#0 AAA 1618
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||