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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10112#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 742 fasta sequence
[TGGTTTTTTCCACTCGCTGTCCCGGGAAAATATCTGGCCGCAGCAAAATCGCACCGTGTCTGCGTACGGGAAAATCGAAAGCAAAAATGAGCCTATTCCTGCGTTCCGTGGCGAGAGCTGGTGCTACGCAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCAAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCCATTACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGTCGGGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACT-GATGGGATGGTCTTCGACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACTAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGGTTCGTGGACAAGCAGGAGGTGCAGAAGAAGCCGCGAGTCAAGAACTACGGCATTAACTTTAGCTGGAACAAGCGTA-CCCGCGTGTCGACCAAGTGAGAAGGTG-TTTTAAAGAAGAAGAAGAAGAATCGTGGACATCAAACAAA-CCGGTGCCGTTGTTAGCTATCGTTGTAAATAAGAGACA-CCTCCTTAAAATTCGTGTC]
[+] EMBL AGA281404 [TGGTTTTTTCCACTCGCTGTCAAAGGAAAATATCTGGCCGCAGCAAAATCGCACCGTGTCTGCGTACGGGAAAATCTAAAGCAAAAATGAGCCTATTCCTGCGTTCAGTGGCGAGAGCTGGTGCTACGCAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCTAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCTATTACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGCCGCGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACT GATGGGATGGTCCTCAACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACCAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGGTTCGTGGACAA ]
[+] EMBL BM634190 [ CCGGGAAAATATCTGGCCGCAGCAAAATCGCACCGTGTCTGCGTACGGGAAAATCTAAAGCAAAAATGAGCCTATTCCTGCGTTCAGTGGCGAGAGCTGGTGCTACGCAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCTAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCTATTACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGCCGCGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACT GATGGGATGGTCCTCAACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACCAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGGTTCGTGGACAAGCAGGAGGTGCAGAAGAAGCCGCGCGTCAAGAACTACGGCATCAACTTTAGCTGGAACAAGCGTA CCCGCGTGTCGACCAA ]
[+] EMBL BM628145 [ CCGGGAAAATATCTGGCCGCAGCAAAATCGCACCGTGTCTGCGTACGGGAAAATCGAAAGCAAAAATGAGCCTATTCCTGCGTTCAGTGGCGAGAGCTGGTGCTACGCAATGGATGCGTGCATCACTCTCAACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCAAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCCATTACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGCCGGGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACT GATGGGATGGTCCTCAACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACTAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGGTTCGTGGACAAGCAGGAGGTGCAGAAGAAGCCGCGAGTCAAGAACTACGGCATCAACTTTAGCTGGAACAAGCGTA CCCGCGTGTCGACCAAGTGAGAAGGTG GTTTAAACAA AAGAAGAAGAAGCGTGGACATCAAACAAA C ]
[+] EMBL BM625174 [ CCGGGAAAATATCTGGCCGCAGCAAAATCGCACCGTGTCTGCGTACGGGAAAATCGAAAGCAAAAATGAGCCTATTTCTGCGTTCCGTGGCGAGAGCTGGTGCTACGCAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCAAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCCATTACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGTCGGGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACT GATGGGATGGTCTTCGACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACTAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGGT ]
[+] EMBL BM598844 [ ccgaaaGGAAAATATCTGGCCGCAGCAAAATCGCACCGTGTCTGCGTACGGGAAAATCGAAAGCAAAAATGAGCCTATTCCTGCGTTCAGTGGCGAGAGCTGGTGCTACGCAATGGATGGGTGCATCACTCTCAACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCAAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCCATTACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGCCGGGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACT GATGGGATGGTCCTCAACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACTAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGGTTCGTGGACAAGCAGGAGGTGCAGAAGAAGCCGCGAGTCAAGAACTACTGCATCAACTTTAGCTGGAACAAGCGTA CCCGCGTGTCGACCA ]
[+] EMBL BM643416 [ ccGAAAATATCTGGCCGCAGCAAAATCGCACCGTGTCTGCGTACGGGAAAATCGAAAGCAAAAATGAGCCTATTTCTGCGTTCCGTGGCGAGAGCTGGTGCTACGCAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCAAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCCATTACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGTCGGGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACT GATGGGATGGTCTTCGACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACTAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGGTTCGTGGACAAGCAGGAGGTGCAGAAGAAGCCGCGAGTCAAGAACTACGGCATTAACTTTAGC ]
[+] EMBL BM592347 [ ccgATCTGGCCGCAGCAAAATCGCACCGTGTCTGCGTACGGGAAAATCGAAAGCAAAAATGAGCCTATTTCTGCGTTCCGTGGCGAGAGCTGGTGCTACGCAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCAAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCCATTACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGTCGGGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACTGGATGGGATGGTCTTCGACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACTAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGGTTCGTGGACAAGCAGGAGGTGCAGAAGAAGCCGCGAGTCAAGAACTACGGCATTAACTTTAGCTGGAACAAGCGTA CCCGCGTGTCGACCAAGTGAGAAGGTG TTTTAAAGAAGAAGAAGAAGAATCGTGGACATCAAACAAACCCGGTGCCGTT ]
[+] EMBL BM594093 [ ccgCTGGCCCCAGCAAAATCGCACCGTGTCTGCGTACGGGAAAATCGAAAGCAAAAATGAGCCTATTCCTGCGTTCCGTGGCGAGAGCTGGTGCTACGCAATGGATGCGTGCATCACTCTCAACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCAAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCATGGTGCCGACCAAGGTCGATATTAGCCCCATTACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGCCGGGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGAACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACT GATGGGATGGTCCTCGACCGGTGATCCACTGTCGAACATGCGCGTCGACTTCACCAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGGTTCGTGGACAAGCAGGAGGTGCAGAAGAAGCCGCGCGTCAAGAACTACGGCATCAACTTTAGCTGGAACAAGCGTA CCCGCGTGTCGACCAAGTGAGAAGGTG TTTTAAAGAAGAAGAAGAAAAAGCGTGGACATCAAACAA ]
[+] EMBL BM590516 [ CCGCAGCAAAATCGCACCGTGTCTGCGTACGGGAAAATCGAAAGCAAAAATGAGCCTATTTCTGCGTTCCGTGGCGAGAGCTGGTGCTACGCAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCAAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCCATTACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGTCGGGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACT GATGGGATGGTCTTCGACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACTAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGGTTCGTGGACAAGCAGGAGGTGCAGAAGAAGCCGCGAGTCAAGAACTACGGCATTAACTTTAGCTGGAACAAGCGTACCCCGCGTGTCGACCAAGTGAGAAGGTGTTTTTAAAG ]
[+] EMBL BX602114 [ CGCAGCAAAATCGCACCGTGTCTGCGTACGGGAAAATCGAAAGCAAAAATGAGCCTATTCCTGCGTTCAGTGGCGAGAGCTGGTGCTACGCAATGGATGCGTG ]
[+] EMBL BM627360 [ ccgGGGAAAATCGAAAGCAAAAATGAGCCTATTTCTGCGTTCCGTGGCGAGAGCTGGTGCTACGCAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCAAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCCATTACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGTCGGGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACT GATGGGATGGTCTTCGACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACTAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGGTTCGTGGACAAGCAGGAGGTGCAGAAGAAGCCGCGAGTCAAGAACTACGGCATTAACTTTAGCTGGAACAAGCGTA CCCGCGTGTCGACCAAGTGAGAAGGTG TTTTAAAGAAGAAGAAGAAGAATCGTGGACATCAAACAAA CCGGTGCCGTTGTTAGCTATCGTTGTAAATAAGAGACA CCTCCTTAAAAT ]
[+] EMBL BM648880 [ ccgCGCAAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCCATTACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGTCGGGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACT GATGGGATGGTCTTCGACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACTAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGGTTCGTGGACAAGCAGGAGGTGCAGAAGAAGCCGCGAGTCAAGAACTACGGCATTAACTTTAGCTGGAACAAGCGTA CCCGCGTGTCGACCAAGTGAGAAGGTG TTTTAAAGAAGAAGAAGAAGAATCGTGGACATCAAACAAA CCGGTGCCGTTGTTAGCTATCGTTGTAAATAAGAGACA CCTCCTT ]
[+] EMBL BM644998 [ ccgCGGTGCCGACCAAGGTCGATATTAGCCCCATTACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGTCGGGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACT GATGGGATGGTCTTCGACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACTAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGGTTCGTGGACAAGCAGGAGGTGCAGAAGAAGCCGCGAGTCAAGAACTACGGCATTAACTTTAGCTGGAACAAGCGTA CCCGCGTGTCGACCAAGTGAGAAGGTG TTTTAAAGAAGAAGAAGAAGAATCGTGGACATCAAACAAA CCGGTGCCGTTGTTAGCTATCGTTGTAAATAAGAGACA CCTCCTTAAAATTCGTGTC]
[+] EMBL BM584480 [ ccGGTCGATATTAGCCCCATTACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGTCGGGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACT GATGGGATGGTCTTCGACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACTAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGGTTCGTGGACAAGCAGGAGGTGCAGAAGAAGCCGCGAGTCAAGAACTACGGCATTAACTTTAGCTGGAACAAGCGTA CCCGCGTGTCGACCAAGTGAGAAGGTG TTTTAAAGAAGAAGAAGAAGAATCGTGGACATCAAACAAA CCGGTGCCGTTGTTAGCTATCGTTGTAAATAAGAGACACCCTCC ]
consensusID : consensus_10112#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 703 fasta sequence
[CCGCGGACGCGTGGGATCGCACCGTGTCTGCGTACGGGAAAATCTAAAGCAAAAATGAGCCTATTCCTGCGTTCAGTGGCGAGAGCTGGTGCTACGCAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCTAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCTATTACTGGCGTGCCGGAG-GAGCACGTGAAGGAGCGCCGCGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCAC-TGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACTGA-TGGGATGGTCCTCAACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACCAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGG-TTCGTGGACAAGCAGGAGGTGCA-GAAGAAGCCGCGCGTC--AAGAACTACGGCATCAACTTTAGCTGGAACAAGCGTACCCGCGTGTCGACCAAGTGAGAAGGTGTTTTAAACAAAAGAAGAAAAAGCGTGGACATCAAACAAACCGGTGCCGTTGTTAGCTATCGTTGTAAATAAGAGACACCTCCTTAAAATT]
[+] EMBL BM591574 [CCGCGGACGCGTGGGATCGCACCGTGTCTGCGTACGGGAAAATCTAAAGCAAAAATGAGCCTATTCCTGCGTTCAGTGGCGAGAGCTGGTGCTACGCAATGGATGCTTGCATCACTCTCGACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCTAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCTATTACTGGCGTGCCGGAG GAGCACGTGAAGGAGCGCCGCGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCAC TGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACTGA TGGGATGGTCCTCAACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACCAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGG TTCGTGGACAAGCAGGAGGTGCA GAAGAAGCCGCGCGTC AAGAACTACGGCATCAACTTTAGCTGGAACAAGCGTACCCGCGTGTCGACCAAGTGAGAAGGTGTTTTAAACAAAAGAAGAAAAAGCGTGGACATCAAACAAACCGGTGCCGTTG ]
[+] EMBL BM580439 [CCGCCCACGCGTCCG CGCACCGTGTCTGCGTACGGGAAAATCGAAAGCAAAAATGAGCCTATTTCTGCGTTCCGTGGCGAGAGCTGGTGCTACGCAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCAAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCCATTACTGGCGTGCCGGAG GAGCACGTGAAGGAGCGTCGGGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCAC TGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACTGA TGGGATGGTCTTCGACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACTAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGG TTCGTGGACAAGCAGGAGGTGCA GAAGAAGCCGCGAGTC AAGAACTACGGCATTAACTTTAGCTGGAACAAGCGTACCCGCGTGTCGACCAAGTGAGAAGGTGTTTTA ]
[+] EMBL BX608068 [ ACCGTGTCTGCGTACGGGAAAATCTAAAGCAAAAATGAGCCTATTCCTGCGTTCAGTGGCGAGAGCTGGTGCTACGCAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCTAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCTATTACTGGCGTGCCGGAG GAGCACGTGAAGGAGCGCCGCGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCAC TGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACTGA TGGGATGGTCCTCAACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACCAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGG TTCGTGGACAAGCAGGAGGTGCA GAAGAAGCCGCGCGTC AAGAACTACGGCATCAACTTTAGCTGGAACAAGCGTACCCGCGTGTCGACCAAGTGAGAAGG ]
[+] EMBL BM646961 [ cCGGGAAAATCTAAAGCAAAAATGAGCCTATTCCTGCGTTCAGTGGCGAGAGCTGGTGCTACGCAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCTAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCTATTACTGGCGTGCCGGAG GAGCACGTGAAGGAGCGCCGCGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCAC TGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACTGA TGGGATGGTCCTCAACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACCAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGG TTCGTGGACAAGCAGGAGGTGCA GAAGAAGCCGCGCGTC AAGAACTACGGCATCAACTTTAGCTGGAACAAGCGTACCCGCGTGTCGACCAAGTGAGAAGGTGTTTT AAGAAAAGAAGAAAAAGCGTGGACATCAAACAAACCGGTGCCGTTGGTAGC ]
[+] EMBL AL693465 [ ccgaggttAAAT TAAAGCAAAAATGAGCCTATTCCTGCGTTCAGTGGCGAGAGCTGGTGCTACGCAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGC AGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCTATTACTGGCGTGCCGGAGTGAGCACGTGAAGGAGCGCCGCGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCACTTGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACTGATTGGGATGGTCCTCAACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACCAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGNTGGAGATGGTTTCGTGGACAAGCAGGAGGTGCAGGAAGAAGCCGCGCGTCCAAAGAACTACGGGATCAACTTTAG ]
[+] EMBL BM595101 [ ccgTCTAAAGCAAAAATGAGCCTATTCCTGCGTTCAGTGGCGAGAGCTGGTGCTACGCAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCTAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCTATTACTGGCGTGCCGGAG GAGCACGTGAAGGAGCGCCGCGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCAC TGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACTGA TGGGATGGTCCTCAACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACCAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGG TTCGTGGACAAGCAGGAGGTGCA GAAGAAGCCGCGCGTC AAGAACTACGGCATCAACTTTAGCTGGAACAAGCGTACCCGCGTGTCGACCAAGTGAGAAGGTGTTTTAAACAAAAGAAGAAAAAGCGTGGACATCA ]
[+] EMBL BX609770 [ TGCGTTCAGTGGCGAGAGCTGGTGCTACGCAATGGATGGGTGCATCACTCTCGACGTCATCGATTGCGTTCAAGGATCCGAAGGGACAAAAGGAAGCCCCGATACTGGACGCTAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGGCCGTGACCACCTTCCCACG ]
[+] EMBL BX612409 [ CAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCTAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCTATTACTGGCGTGCCGGAG GAGCACGTGAAGGAGCGCCGCGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCAC TGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACTGA TGGGATGGTCCTCAACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACCAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGG TTCGTGGACAAGCAGGAGGTGCA GAAGAAGCCGCGCGTC AAGAACTACGGCATCAACTTTAGCTGGAACAAGCGTACCCGCGTGTCGACCAAGTGAGAAGGTGTTTTAAACAAAAGAAGAAAAAGCGTGGACATCAAACAAACCGGTGCCGTTGTTAGCTATCGTTGTAAATAAGAGACACCTCCTTAAAATT]
[+] EMBL BX612137 [ CTCAACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACCAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGG TTCGTGGACAAGCAGGAGGTGCA GAAGAAGCCGCGCGTC AAGAACTACGGCATCAACTTTAGCTGGAACAAGCGTACCCGCGTGTCGACCAAGTGAGAAGGTGTTTTAAACAAAAGAAGAAAAAGCGTGGACATCAAACAAACCGGTGCCGTTGTTAGCTATCGTTGTA ]
[-] EMBL AGA283017 [ GGAGGTGCA GAAGAAGCCGCGCGTC AAGAACTACGGCATCAACTTTAGCTGGAACAAGCGTACCCGCGTGTCGACCAAGTGAGAAGGTGTTTTAAACAAAAGAAGAAAAAGCGTGGACATCAAACAAACCGGTGCCGTTGTTAGCTATCGTTGTAAATAAGAGACACCTCCTT ]
consensusID : consensus_10112#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 549 fasta sequence
[CCGCCCACGCGTCCGGAGAGCTGGTGCTACGCAATGGATGCGTGCATCACTCTCAACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCAAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCATGGTGCCGACCAAGGTCGATATTAGCCCCATTACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGCCGGGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGAACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACTGATGGGATGGTCCTCGACCGGTGATCCACTGTCGAACATGCGCGTCGACTTCACCAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGGTTCGTGGACAAGCAGGAGGTGCAGAAGAAGCCGCGCGTCAAGAACTACGGCATCAACTTTAGCTGGAACAAGCGTACCCGCGTGTCGACCAAGTGAGAAGGTGT]
[+] EMBL BM615876 [CCGCCCACGCGTCCGGAGAGCTGGTGCTACGCAATGGATGCGTGCATCACTCTCAACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCAAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCATGGTGCCGACCAAGGTCGATATTAGCCCCATTACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGCCGGGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGAACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACTGATGGGATGGTCCTCGACCGGTGATCCACTGTCGAACATGCGCGTCGACTTCACCAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGGTTCGTGGACAAGCAGGAGGTGCAGAAGAAGCCGCGCGTCAAGAACTACGGCATCAACTTTAGCTGGAACAAGCGTACCCGCGTGTCGACCAAGTGAGAAGGTGT]
[+] EMBL BM601399 [ CGCAATGGATGCGTGCATCACTCTCAACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCAAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCATGGTGCCGACCAAGGTCGATATTAGCCCCATTACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGCCGGGTGCGCATCTTCATGCCGGGCAAGAACGCGATGCAAAGCGGAACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACTGATGGGATGGTCCTCGACCGGTGATCCACTGTCGAACATGCGCGTCGACTTCACCAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGGTTCGTGGACAAGCACGAGGTGCAGAAGAAGCCGCGCGTCAAGAACTACG ]
consensusID : consensus_10112#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 530 fasta sequence
[CCGCCCACGCGTCCGGTCTGCGTACGGGAAAATCGAAAGCAAAAATGAGCCTATTTCTGCGTTCCGTGGCGAGAGCTGGTGCTACGCAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCAAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCCATTACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGTCGGGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACTGATGGGATGGTCTTCGACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACTAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGGTTCGTGGACAAGCAGGAGGTGCAGAAGAAG]
[+] EMBL BM631425 [CCGCCCACGCGTCCGGTCTGCGTACGGGAAAATCGAAAGCAAAAATGAGCCTATTTCTGCGTTCCGTGGCGAGAGCTGGTGCTACGCAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCAAGGATCCGAAGGCACAAAAGGAAGCCCCGATACTGGACGCAAGCGTTGTTCTCGCCGATGCAGAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCCATTACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGTCGGGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGTACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGCGAGCGCTGGGAGAACCCACTGATGGGATGGTCTTCGACCGGTGATCCATTGTCGAACATGCGCGTCGACTTCACTAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGATGGTTCGTGGACAAGCAGGAGGTGCAGAAGAAG]
consensusID : consensus_10112#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 418 fasta sequence
[CCGCCCTCGCGTCCGCGCTGTCTAGGAAAATATCTGGCCGCACCAGAATCGCACCGTGTCTGCGTACGGGAAAATCGAAAGCATTAATGAGCCTATTTCTGCGTTCCGTGGCGAGAGCTGGTGCTACGCAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCGAGGATCCGAAGGCACCAAAGGAAGCCCCGATACTGGACGCCAGCGTTGTTCTCGCCGATGCACAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCCATTACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGTCTGGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGCACGGACTACATCCACCACTGGAGCATCCAGTTCCATAACCG]
[+] EMBL BM594446 [CCGCCCTCGCGTCCGCGCTGTCTAGGAAAATATCTGGCCGCACCAGAATCGCACCGTGTCTGCGTACGGGAAAATCGAAAGCATTAATGAGCCTATTTCTGCGTTCCGTGGCGAGAGCTGGTGCTACGCAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCGAGGATCCGAAGGCACCAAAGGAAGCCCCGATACTGGACGCCAGCGTTGTTCTCGCCGATGCACAGGAGCGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCCATTACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGTCTGGTGCGCATCTTCATGCCGGCCAAGAACGCGATGCAAAGCGGCACGGACTACATCCACCACTGGAGCATCCAGTTCCATAACCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10112#0 -TGGTTTTTTCCACTCGCTGTCCCGGGAAAATATCTGGCCGCAGCAAAATCGCACCGTGT 59
consensus_10112#4 CCGCCCTCGCGTCCGCGCTGTCT-AGGAAAATATCTGGCCGCACCAGAATCGCACCGTGT 59
consensus_10112#1 ---------------------------------CCGCGGACGCGTGGGATCGCACCGTGT 27
consensus_10112#2 ------------------------------------------------------------
consensus_10112#3 -------------------------------------------CCGCCCACGCGTCCGGT 17
consensus_10112#0 CTGCGTACGGGAAAATCGAAAGCAAAAATGAGCCTATTCCTGCGTTCCGTGGCGAGAGCT 119
consensus_10112#4 CTGCGTACGGGAAAATCGAAAGCATTAATGAGCCTATTTCTGCGTTCCGTGGCGAGAGCT 119
consensus_10112#1 CTGCGTACGGGAAAATCTAAAGCAAAAATGAGCCTATTCCTGCGTTCAGTGGCGAGAGCT 87
consensus_10112#2 ---------------------------------CCGCCCACGCGTCCGG-----AGAGCT 22
consensus_10112#3 CTGCGTACGGGAAAATCGAAAGCAAAAATGAGCCTATTTCTGCGTTCCGTGGCGAGAGCT 77
* **** * * ******
consensus_10112#0 GGTGCTACGCAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCAAGGATCCG 179
consensus_10112#4 GGTGCTACGCAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCGAGGATCCG 179
consensus_10112#1 GGTGCTACGCAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCAAGGATCCG 147
consensus_10112#2 GGTGCTACGCAATGGATGCGTGCATCACTCTCAACGTCATCGATCGCGTTCAAGGATCCG 82
consensus_10112#3 GGTGCTACGCAATGGATGCGTGCATCACTCTCGACGTCATCGATCGCGTTCAAGGATCCG 137
******************************** ****************** ********
consensus_10112#0 AAGGCACAAAAGGAAGCCCCGATACTGGACGCAAGCGTTGTTCTCGCCGATGCAGAGGAG 239
consensus_10112#4 AAGGCACCAAAGGAAGCCCCGATACTGGACGCCAGCGTTGTTCTCGCCGATGCACAGGAG 239
consensus_10112#1 AAGGCACAAAAGGAAGCCCCGATACTGGACGCTAGCGTTGTTCTCGCCGATGCAGAGGAG 207
consensus_10112#2 AAGGCACAAAAGGAAGCCCCGATACTGGACGCAAGCGTTGTTCTCGCCGATGCAGAGGAG 142
consensus_10112#3 AAGGCACAAAAGGAAGCCCCGATACTGGACGCAAGCGTTGTTCTCGCCGATGCAGAGGAG 197
******* ************************ ********************* *****
consensus_10112#0 CGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCCATT 299
consensus_10112#4 CGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCCATT 299
consensus_10112#1 CGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCTATT 267
consensus_10112#2 CGTGCCCGTGACCACCTTCCCACGATCATGGTGCCGACCAAGGTCGATATTAGCCCCATT 202
consensus_10112#3 CGTGCCCGTGACCACCTTCCCACGATCACGGTGCCGACCAAGGTCGATATTAGCCCCATT 257
**************************** *************************** ***
consensus_10112#0 ACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGTCGGGTGCGCATCTTCATGCCGGCCAAG 359
consensus_10112#4 ACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGTCTGGTGCGCATCTTCATGCCGGCCAAG 359
consensus_10112#1 ACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGCCGCGTGCGCATCTTCATGCCGGCCAAG 327
consensus_10112#2 ACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGCCGGGTGCGCATCTTCATGCCGGCCAAG 262
consensus_10112#3 ACTGGCGTGCCGGAGGAGCACGTGAAGGAGCGTCGGGTGCGCATCTTCATGCCGGCCAAG 317
******************************** * ************************
consensus_10112#0 AACGCGATGCAAAGCGGTACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGC 419
consensus_10112#4 AACGCGATGCAAAGCGGCACGGACTACATCCACCACTGGAGCATCCAGTTCCATAACCG- 418
consensus_10112#1 AACGCGATGCAAAGCGGTACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGC 387
consensus_10112#2 AACGCGATGCAAAGCGGAACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGC 322
consensus_10112#3 AACGCGATGCAAAGCGGTACGGACAACATCCACCACTGGAGCATCGAGTTCGATAACCGC 377
***************** ****** ******************** ***** *******
consensus_10112#0 GAGCGCTGGGAGAACCCACTGATGGGATGGTCTTCGACCGGTGATCCATTGTCGAACATG 479
consensus_10112#4 ------------------------------------------------------------
consensus_10112#1 GAGCGCTGGGAGAACCCACTGATGGGATGGTCCTCAACCGGTGATCCATTGTCGAACATG 447
consensus_10112#2 GAGCGCTGGGAGAACCCACTGATGGGATGGTCCTCGACCGGTGATCCACTGTCGAACATG 382
consensus_10112#3 GAGCGCTGGGAGAACCCACTGATGGGATGGTCTTCGACCGGTGATCCATTGTCGAACATG 437
consensus_10112#0 CGCGTCGACTTCACTAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGA 539
consensus_10112#4 ------------------------------------------------------------
consensus_10112#1 CGCGTCGACTTCACCAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGA 507
consensus_10112#2 CGCGTCGACTTCACCAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGA 442
consensus_10112#3 CGCGTCGACTTCACTAGCGCCGACGAGGCGATCGCCCACTGCGAAAAGAACGGCTGGAGA 497
consensus_10112#0 TGGTTCGTGGACAAGCAGGAGGTGCAGAAGAAGCCGCGAGTCAAGAACTACGGCATTAAC 599
consensus_10112#4 ------------------------------------------------------------
consensus_10112#1 TGGTTCGTGGACAAGCAGGAGGTGCAGAAGAAGCCGCGCGTCAAGAACTACGGCATCAAC 567
consensus_10112#2 TGGTTCGTGGACAAGCAGGAGGTGCAGAAGAAGCCGCGCGTCAAGAACTACGGCATCAAC 502
consensus_10112#3 TGGTTCGTGGACAAGCAGGAGGTGCAGAAGAAG--------------------------- 530
consensus_10112#0 TTTAGCTGGAACAAGCGTACCCGCGTGTCGACCAAGTGAGAAGGTGTTTTAAAGAAGAAG 659
consensus_10112#4 ------------------------------------------------------------
consensus_10112#1 TTTAGCTGGAACAAGCGTACCCGCGTGTCGACCAAGTGAGAAGGTGTTTTAAACAAAAGA 627
consensus_10112#2 TTTAGCTGGAACAAGCGTACCCGCGTGTCGACCAAGTGAGAAGGTGT------------- 549
consensus_10112#3 ------------------------------------------------------------
consensus_10112#0 AAGAAGAATCGTGGACATCAAACAAACCGGTGCCGTTGTTAGCTATCGTTGTAAATAAGA 719
consensus_10112#4 ------------------------------------------------------------
consensus_10112#1 AGAAAAAGCGTGGACATCAAACAAACCGGTGCCGTTGTTAGCTATCGTTGTAAATAAGAG 687
consensus_10112#2 ------------------------------------------------------------
consensus_10112#3 ------------------------------------------------------------
consensus_10112#0 GACACCTCCTTAAAATTCGTGTC 742
consensus_10112#4 -----------------------
consensus_10112#1 ACACCTCCTTAAAATT------- 703
consensus_10112#2 -----------------------
consensus_10112#3 -----------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||