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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10176#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 1023 fasta sequence
[CCGCCCACGCCGGTACAAAACGTAAAACCTAGAAGTTTATTAATGGCAGCAATTTCAATCTTCAGTCGCTTCCTTTTACGATCAAAACAGTTTGCATCCTTACGAAGCTTCCACATGTCCTCCGCACG-AGAAAG-ATCTGAAAA-G-GTTTTAGAAGAGTTGAAAGGAAAAAATCCGTACTTCGAAAAGTACGCTAGC-AAAATCGCCGCGGTGCAGCAAAATTCACCAGAAGAATTCCTATCCCGGTTAGAAAAT-GTGGATAAAG-AAAAG-AAAAAGCCT-AAGTTTGGACTTGCTGAAGTGCAACGTGACTATTCGGAACTTCTC-AAACCC-AAAGCTCCACTCGGAACCG-AAGCATCGCGAGACATTACGCATCGCAAACTGAGTGATGTTATGCGGCTGGAGTTGATTGAAGATAAGTCTGCAGACGACATCAAGCATTTATGGCTGGAATATCATAGGGATAAAGATGTCATAACGGCTGCAATACCAGTTGATCAATTCAACCAAATGATGGAATGTGCAAAGCAGTACCCAGTGTTTATACTTCCTATTCCTCGAAGCGAAGGGTACGAGTTCATAATGCTACAATTTGCAGCTAA-CACTATTCATTTCACG-CCTTTGTTAAATTACCAGGTCCACAAAGAAAACGCCCCTGAATGTTTAAACATCACCATGTTTACAGAATGTTCTGATAAAGGAATCATACTGATGCGGGGAGAATATGATACCAAAGTAATCAATGCACAGGAAGCACAGTGTTTAGCAAATCAAGTCCAACTTTATTATTGTCAGAAGAATGTATCTAAATTGCATCTGCTTGAAACGTTTACTAGACATCCGGATAAGTTCAAACACATGGACATCATCGAGGAGTTGAACAATTTGAAAATTTAATTGTTTTTTCTTATGAAGGTACTTAATTGTTATCAGAACATAGCTTCCT-GGGAGTCC-TGTATTGTTGTTGCAG-CCAATATATCTTGCGATAAATATACCGGGGTGCCTTCAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BM589204 [CCGCCCACGCGTCCGCAAAACGTAAAACCTAGAAGTTTATTAATGGCAGCAATTTCAATCTTCAGTCGCTTCCTTTTACGATCAAAACAGTTTGCATCCTTGCGAAGCTTCCACATGTCCTCCGCACG AGAAAG ATCTGAAAA G GTTTTAGAAGAGTTGAAAGGAAAAAATCCGTACTTCGAAAAGTACGCTAGC AAAATCGCCGCGGTGCAGCAAAATTCACCAGAAGAATTCCTATCCCGGTTAGATAAT GTGGATAAAG AAAAG AAAAAGCCT AAGTTTGGACTTTCTGAAGTGCAACGTGACTATTCGGAACTTCTC AAACCC AAAGCTCCACTCGGAACCG AAGCATCGCGAGACATTACGCATCGCAAACTGAGTGATGTTATGCGGCTAGAGTTGATTGAAGATAAGTCTGCAGACGACATCAAGCATTTATGGCTGGAATATCATAGGGATAAAGATGTCATAACGGCTGCAATACCAGTTGATCAATTCAACCAAATGATGGAATGTGCAAAGCAGTACCCAGTGTTTATACTTCCTATTCCTCGAAGCGAAGGGTACGAGTTCATAATGCTACAA ]
[+] EMBL CNS08NJJ [ tCGGTAAAAAACGTAAAACCTAGAAGTTTATTAATGGCAGCAATTTCAATCTTCAGTCGCTTCCTTTTACGATCAAAACAGTTTGCATCCTTACG AGCTTCCACATGTCCTCCGCACG AGAAAG ATCTGAAAA G GTTTTAGAAGAGTTGAAAGGAAAAAATCCGTACTTCGAAAAGTACGCTAGC AAAATCGCCGCGGTGCAGCAAAATTCACCAGAAGAATTCCTATCCCGGTTAGAAAAT GTGGATAAAG AAAAG AAAAAGCCT AAGTTTGGACTTGCTGAAGTGCAACGTGACTATTCGGAACTTCTC AAACCC AAAGCTCCACTCGGAACCG AAGCATCGCGAGACATTACGCATCGCAAACTGAGTGATGTTATGCGGCTGGAGTTGATTGAAGATAAGTCTGCAGACGACATTTTGCATTTATGGCTGGAATATCATAGGGATAAAGATGTCATAACGGCTGCAATACCAGTTGATCAATTCAACCAAATGATGGAATGTGCAAAGCAGTACCCAGTGTTTATACTTCCTATTCCTCGAAGCGAAGGGTACGAGTTCATAATGCTACAATTTGCAGCTAA CACTATTCATTTCACG CCTTTGTTAAATTACCAGGTCCACAAAGAAAACGCCCCTGAATGTTTAAACATCACCATGTTTACAGAATGTTCTGATAAAGGAATCATACTGATGCGGGGAGAATATGATACCAAAGTAATCAATGCACAGGAAGCACAGTGTTTAGCAAATCAAGTCCAACTTTATTATTGTCAGAAGAATGTATCTAAATTGCATCTGCTTGAAACGTTTACTAGACATCCGGATAAGTTCAAACACATGGACATCATCGAGGAGTTGAACAATTTGAAAATTTAATTGTTTTTTCTTATGAAGGTACTTAATTGTTATCAGAACATAGCTTCCTGGGGAGTCC TGTATTGTTGTTGCAG CCAATATATCTTGCGA ]
[+] EMBL CNS0971T [ CGGTACAAAACGTAAAACCTAGAAGTTTATTAATGGCAGCAATTTCAATCTTCAGTCGCTTCCTTTTACGATCAAAACAGTTTGCATCCTTACGAAGCTTCCACATGTCCTCCGCACG AGAAAGCATCTGAAAAGG GTTTTAGAAGAGTTGAAAGGAAAAAATCCGTACTTCGAAAAGTACGCTAGCAAAAATCGCCGCGGTGCAGCAAAATTCACCAGAAGAATTCCTATCCCGGTTAGAAAATGGTGGATAAAG AAAAG AAAAAGCCT AAGTTTGGACTTGCTGAAGTGCAACGGGACTATTCGGAACTTCTC AAACCC AAAGCTCCACTCGGAACCG AAGCATCGCGAGACATTACGCATCGCAAACTGAGTGATGTTATGCGGCTGGAGTTGATTGAAGATAAGTCTGCA ]
[+] EMBL CNS0972V [ GTACAAAACGTAAAACCTAGAAGTTTATTAATGGCAGCAATTTCAATCTTCAGTCGCTTCCTTTTACGATCAAAACAGTTTGCATCCTTACGAAGCTTCCACATGTCCTCCGCACG AGAAAG ATCTGAAAA G GTTTTAGAAGAGTTGAAAGGAAAAAATCCGTACTTCGAAAAGTACGCTAGC AAAATCGCCGCGGTGCAGCAAAATTCACCAGAAGAATTCCTATCCCGGTTAG AAAT GTGGATAAAG AAAAG AAAAAGCCT AAGTTTGGACTTGCTG AGTG ]
[+] EMBL CNS08VZ6 [ ccTAAAAAACGTAAAACCTAGAAGTTTATTAATGGCAGCAATTTCAATCTTCAGTCGCTTCCTTTTACGATCAAAACAGTTTGCATCCTTACG AGCTTCCACATGTCCTCCGCACG AGAAAG ATCTGAAAA G GTTTTAGAAGAGTTGAAAGGAAAAAATCCGTACTTCGAAAAGTACGCTAGC AAAATCGCCGCGGTGCAGCAAAATTCACCAGAAGAATTCCTATCCCGGTTAGAAAAT GTGGATAAAGAAAAAGAAAAAAGCCTAAAGTTTGGACTTGCTG AGTGC ACGTGACTATTCGG ACTTCTCAAAACCCAAAAGCTCCACTCGGAACCGAAAGCATC ]
[+] EMBL AL694788 [ cccgaggttAAACGTAAA CTAGAAG TTATTAATGGCAGCAATTTCAATCTTCAGTCGCTTCCTTTTACGATCAAAACAG TTGCATCCTTACGAAGCTTCCACATGTCCTCCGCACG AGAAAG ATCTGAAAA G GTTTTAGAAGAGTTGAAAGGAAAAAATCCGTACTTCGAAAAGTACGCTAGC AAAATCGCCGCGGTGCAGCAAAATTCACCAGAAGAATTCCTATCCCGGTTAGAAAAT GTGGATAAAG AAAAG AAAAAGCCT AAGTTTGGACTTGCTGAAGTGCAACGTGACTATTCGGAACTTCTC AAACCC AAAGCTCCACTCGGAACCG AAGCATCGCGAGACATTACGCATCGCAAACTGAGTGATGTTATGCGGCTGGAGTTGATTGAAGATAAGTCTGCAGACGACATCAAGCATTTATGGCTGGAATATCATAGGGATAAAGATGTCATAACGGCTGCAATACCAGTTGATCAATTCAACCAAATGATGGAATGTGCAAAGCAGTACCCAGTGTTTATACTTCCTATTCCTCGAAGTGAAGGGTACGAGTTCATAATGCTACAATTTGCAGCTAANCACTATTCATTTCACGCCCTTTGTTGAATTACCAGGTCCAC AAGAAAACGGCCCTGAATGTTTA ]
[+] EMBL BM652302 [ ccgCGTAAAACCTAGAAGTTTATTAATGGCAGCAATTTCAATCTTCAGTCGCTTCCTTTTACGATCAAAACAGTTTGCATCCTTACGAAGCTTCCACATGTCCTCCGCACG AGAAAG ATCTGAAAA G GTTTTAGAAGAGTTGAAAGGAAAAAATCCGTACTTCGAAAAGTACGCTAGC AAAATCGCCGCGGTGCAGCAAAATTCACCAGAAGAATTCCTATCCCGGTTAGATAAT GTGGATAAAG AAAAG AAAAAGCCT AAGTTTGGACTTGCTGAAGTGCAACGTGACTATTCGGAACTTCTC AAACCC AAAGCTCCACTCGGAACCG AAGCATCGCGAGACATTACGCATCGCAAACTGAGTGATGTTATGCGGCTGGAGTTGATTGAAGATAAGTCTGCAGACGACATCAAGCATTTATGGCTGGAATATCATAGGGATAAAGATGTCATAACGGCTGCAATACCAGTTGATCAATTCAACCAAATGATGGAATGTGCAAAGCAGTACCCAGTGTTTATACTTCCTATTCCTCGAAGCGAAGGGTACGAGTTCATAATGCTACAATTTGCAGCTAA CACTATTCATTTCACG CCTTTGTTGAATTACCAGGTCCACAAAGAAAACGCCCCTGAATGTTTAAACATCACCATGTTTACAGAATGTTCT ]
[+] EMBL CNS08N4V [ AACCTAGAAGTTTATTAATGGCAGCAATTTCAATCTTCAGTCGCTTCCTTTTACGATCAAAACAGTTTGCATCCTTACGAAGCTTCCACATGTCCTCCGCACGAATAAAG ATCTGAAAA G GTTTTAGAAGAGTTGAAAGGAAAAAATCCGTACTTCGAAAAGTACGCTAGC AAAATCGCCGCGGTGCAGCAAAATTCACCAGAAGAATTCCTATCCCGGTTAGAAAAT GTGGATAAAG AAAAG AAAAAGCCT AAGTTTGGACTTGCTGAAGTGCAACGTGACTATTCGGAACTTCTC AAACCC AAAGCTCCACTCGGAACCG AAGCATCGCGAGACATTACGCATCGCAAACTGAGTGATGTTATGCGGCTGGAGTTGATTGAAGATAAGTCTGCAGACGACATCAAGCATTTATGGCTGGAATATCATAGGGATAAAGATGTCATAACGGCTGCAATACCAGTTGATCAATTCAACCAAATGATGGAATGTGCAAAGCAGTACCCAGTGTTTATACTTCCTATTCCTCGAAGCGAAGGGTACGAGTTCATAATGCTACAATTTGCAGCTAA CACTATTCATTTCACG CCTTTGTTAAATTACCAGGTCCACAAAGAAAACGCCCCTGAATGTTTAAACATCACCATGTTTACAGAATGTTCTGATAAAGGAATCATACTGATGCGGGGAGAATATGATACCAAAGTAATCAATGCACAGGAAGCACAGTGTTTAGCAAATCAAGTCCAACTTTATTATTGTCAGAAGAATGTATCTAAATTGCATCTGCTTGAAACGTTTACTAGACATCCGGATAAGTTCAAACACATGGACATCATCGAGGAGTTGAACAATTTGAAAATTTAATTGTTTTTT ]
[+] EMBL BM576301 [ ccgGTTTATTAATGGCAGCAATTTCAATCTTCAGTCGCTTCCTTTTACGATCAAAACAGTTTGCATCCTTGCGAAGCTTCCACATGTCCTCCGCACG AGAAAG ATCTGAAAA G GTTTTAGAAGAGTTGAAAGGAAAAAATCCGTACTTCGAAAAGTACGCTAGC AAAATCGCCGCGGTGCAGCAAAATTCACCAGAAGAATTCCTATCCCGGTTAGATAAT GTGGATAAAG AAAAG AAAAAGCCT AAGTTTGGACTTTCTGAAGTGCAACGTGACTATTCGGAACTTCTC AAACCC AAAGCTCCACTCGGAACCG AAGCATCGCGAGACATTACGCATCGCAAACTGAGTGATGTTATGCGGCTAGAGTTGATTGAAGATAAGTCTGCAGACGACATCAAGCATTTATGGCTGGAATATCATAGGGATAAAGATGTCATAACGGCTGCAATACCAGTTGATCAATTCAACCAAATGATGGAATGTGCAAAGCAGTACCCAGTGTTTATACTTCCTATTCCTCGAAGCGAAGGGTACGAGTTCATAATGCTACAATTTGCAGCTAA CACTATTCATTTCACG CCTTTGTTGAATTACCAGGTCCACAAAGAAAACGCCCCTGAATGTTTAAACATCACCATGTTTACAGAATGTTCTGATAAAGGAATCATACTGATGCGGGG ]
[+] EMBL CNS09QKX [ TTATTAATGGCAGCAATTTCAATCTTCAGTCGCTTCCTTTTACGATCAAAACAGTTTGCATCCTTACGAAGCTTCCACATGTCCTCCGCACG AGAAAG ATCTGAAAA G GTTTTAGAAGAGTTGAAAGGAAAAAATCCGTACTTCGAAAAGTACGCTAGC AAAATCGCCGCGGTGCAGCAAAATTCACCAGAAGAATTCCTATCCCGGTTAGAAAAT GTGGATAAAG AAAAG AAAAAGCCT AAGTTTGGACTTGCTGAAGTGCAACGTGACTATTCGGAACTTCTC AAACCC AAAGCTCCACTCGGAACCG AAGCATCGCGAGACATTACGCATCGCAAACTGAGTGATGTTATGCGGCTGGAGTTGATTGAAGATAAGTCTGCAGACGACATCAAGCATTTATGGCTGGAATATCATAGGGATAAAGATGTCATAACGGCTGCAATACCAGTTGATCAATTCAACCAAATGATGGAATGTGCAAAGCAGTACCCAATGATTATA ]
[+] EMBL CNS09I1E [ TTATTAATGGCAGCAATTTCAATCTTCAGTCGCTTCCTTTTACGATCAAAACAGTTTGCATCCTTACGAAGCTTCCACATGTCCTCCGCACG AGAAAG ATCTGAAAA GCGTTTTAGAAGAGTTGAAAGGAAAAAATCCGTACTTCGAAAAGTACGCTAGC AAAATCGCCGCGGTGCAGCAAAATTCACCAGAAGAATTCCTATCCCGGTTAGAAAAT GTGGATAAAG AAAAG AAAAAGCCT AAGTTTGGACTTGCTGAAGTGCAACGTGACTATTCGGAACTTCTC AAACCC AAAGCTCCACTCGGAACCG AAGCATCGCGAGACATTACGCATCGCAAACTGAGTGATGTTATGCGGCTGGAGTTGATTGAAGATAAGTCTTCAGACGACATCAAGCATTTATGGCTGGAATATCATAGGGATAAAGATGTCATAACGGCTGCAATACCAGTTGATCAATTCAACCAAATGATGGAATGTGCAAAGCAGTACCCAGTGTTTATACTTCCTATTCCTCGAAGCGAAGGGTACGAGTTCATAATGCTACAATTTGCAGCTAA CACTATTCATTTCACG CCTTTGTTAAATTACCAGGTCCACAAAGAAAACGCCCCTGAATGTTTAAACATCACCATGTTTACAGAATGTTCTGATAAAGGAATCATACTGATGCGGGGAGAATATGATACCAAAGTAATCAATGCACAGGAAGCACAGTGTTTAGCAAATCAAGTCCAACTTTATTATTGTCAGAAGAATGTATCTAAATTGCATCTGCTTGAAACGTTTACTAGACATCCGGATAAGTTCAAACACATGGACATCATCGAGGAGTTGAACAATTTGAAAATTTAATTGTTTTTTCTTATGAAGGTACTTAATTGTTATCAGAACATAGCTTCCT GGGAGTCC TGTATTG ]
[+] EMBL CNS08LLP [ CAATCTTCAGTCGCTTCCTTTTACGATCAAAACAGTTTGCATCCTTACGAAGCTTCCACATGTCCTCCGCACG AGAAAG ATCTGAAAA G GTTTTAGAAGAGTTGAAAGGAAAAAATCCGTACTTCGAAAAGTACGCTAGC AAAATCGCCGCGGTGCAGCAAAAGGCACCAGAAGAAGGCCTAGCCCGGGGAGAAAAG GGGGATAAAG AAAAG AAAAAGCCga ]
[+] EMBL CNS096N9 [ GTCGCTTCCTTTTACGATCAAAACAGTTTGCATCCTTACGAAGCTTCCACATGTCCTCCGCACG AGAAAG ATCTGAAAA GCGTTTTAGAAGAGTTGAAAGGAAAAAATCCGTACTTCGAAAAGTACGCTAGC AAAATCGCCGCGGTGCAGCAAAATTCACCAGAAGAATTCCTATCCCGGTTAGAAAAT GTGGATAAAG AAAAG AAAAAGCCT AAGTTTGGACTTGCTGAAGTGCAACGTGACTATTCGGAACTTCTC AAACCC AAAGCTCCACTCGGAACCG AAGCATCGCGAGACATTACGCATCGCAAACTGAGTGATGTTATGCGGCTGGAGTTGATTGAAGATAAGTCTGCAGACGACATCAAGCATTTATGGCTGGAATATCATAGGGATAAAGATGTCATAACGGCTGCAATACCAGTTGATCAATTCAACCAAATGATGGAATGTGCAAAGCAGTACCCAGTGTTTATACTTCCTATTCCTCGAAGCGAAGGGTACGAGTTCATAATGCTACAATTTGCAGCTAA CACTATTCATTTCACG CCTTTGTTAAATTACCAGGTCCACAAAGAAAACGCCCCTGAATGTTTAAACATCACCATGTTTACAGAATGTTCTGATAAAGGAATCATACTGATGCGGGGAGAATATGATACCAAAGTAATCAATGCACAGGAAGCACAGTGTTTAGCAAATCAAGTCCAACTTTATTATTGTCAGAAGAATGTATCTAAATTGCATCTGCTTGAAACGTTTACTAGACATCCGGATAAGTTCAAACACATGGACATCATCGAGGAGTTGAACAATTTGAAAATTTAATTGTTTTTTCTTATGAAGGTACTTAATTGTTATCAGAACATAGCTTCCT GGGAGTCC TGTATTGTTGTTGCAG CCAATATATCTTGCGATAAATATACCGGGGTGCCTTCAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BM612399 [ ccgCTTGCGAAGCTTCCACATGTCCTCCGCACG AGAAAG ATCTGAAAA G GTTTTAGAAGAGTTGAAAGGAAAAAATCCGTACTTCGAAAAGTACGCTAGC AAAATCGCCGCGGTGCAGCAAAATTCACCAGAAGAATTCCTATCCCGGTTAGATAAT GTGGATAAAG AAAAG AAAAAGCCT AAGTTTGGACTTTCTGAAGTGCAACGTGACTATTCGGAACTTCTC AAACCC AAAGCTCCACTCGGAACCG AAGCATCGCGAGACATTACGCATCGCAAACTGAGTGATGTTATGCGGCTAGAGTTGATTGAAGATAAGTCTGCAGACGACATCAAGCATTTATGGCTGGAATATCATAGGGATAAAGATGTCATAACGGCTGCAATACCAGTTGATCAATTCAACCAAATGATGGAATGTGCAAAGCAGTACCCAGTGTTTATACTTCCTATTCCTCGAAGCGAAGGGTACGAGTTCATAATGCTACAATTTGCAGCTAA CACTATTCATTTCACG CCTTTGTTGAATTACCAGGTCCACAAAGAAAACGCCCCTGAATGTTTAAACATCACCATGTTTACAGAATGTTCTGATAAAGGAATCATACTGATGCGGGGAGAATATGATACCAAAGTAATCAATGCACAGG ]
[-] EMBL CNS09I1F [ TACGAAGCTTCCACATGTCCTCCGCACG AGAAAG ATCTGAAAA G GTTTTAGAAGAGTTGAAAGGAAAAAATCCGTACTTCGAAAAGTACGCTAGC AAAATCGCCGCGGTGCAGCAAAATTCACCAGAAGAATTCCTATCCCGGTTAGAAAAT GTGGATAAAG AAAAG AAAAAGCCT AAGTTTGGACTTGCTGAAGTGCAACGTGACTATTCGGAACTTCTC AAACCC AAAGCTCCACTCGGAACCG AAGCATCGCGAGACATTACGCATCGCAAACTGAGTGATGTTATGCGGCTGGAGTTGATTGAAGATAAGTCTGCAGACGACATCAAGCATTTATGGCTGGAATATCATAGGGATAAAGATGTCATAACGGCTGCAATACCAGTTGATCAATTCAACCAAATGATGGAATGTGCAAAGCAGTACCCAGTGTTTATACTTCCTATTCCTCGAAGCGAAGGGTACGAGTTCATAATGCTACAATTTGCAGCTAA CACTATTCATTTCAAA CCTTTGTTAAATTACCAGGTCCACAAAGAAAACGCCCCTGAATGTTTAAACATCACCATGTTTACAGAATGTTCTGATAAAGGAATCATACTGATGCGGGGAGAATATGATACCAAAGTAATCAATGCACAGGAAGCACAGTGTTTAGCAAATCAAGTCCAACTTTATTATTGTCAGAAGAATGTATCTAAATTGCATCTGCTTGAAACGTTTACTAGACATCCGGATAAGTTCAAACACATGGACATCATCGAGGAGTTGAACAATTTGAAAATTTAATTGTTTTTTCTTATGAAGGTACTTAATTGTTATCAGAACATAGCTTCCT GGGAGTCCGTGTATTGTTGTTGCAGCCCAATATATCTTGCGATAAATA ]
[+] EMBL BM650149 [ ccgCTCCGCACG AGAAAG ATCTGAAAA G GTTTTAGAAGAGTTGAAAGGAAAAAATCCGTACTTCGAAAAGTACGCTAGC AAAATCGCCGCGGTGCAGCAAAATTCACCAGAAGAATTCCTATCCCGGTTAGATAAT GTGGATAAAG AAAAG AAAAAGCCT AAGTTTGGACTTTCTGAAGTGCAACGTGACTATTCGGAACTTCTC AAACCC AAAGCTCCACTCGGAACCG AAGCATCGCGAGACATTACGCATCGCAAACTGAGTGATGTTATGCGGCTAGAGTTGATTGAAGATAAGTCTGCAGACGACATCAAGCATTTATGGCTGGAATATCATAGGGATAAAAATGTCATAACGGCTGCAATACCAGTTGATCAATTCAACCAAATGATGGAATGTGCAAAGCAGTACCCAGTGTTTATACTTCCTATTCCTCGAAGCGAAGGGTACGAGTTCATAATGCTACAATTTGCAGCTAA CACTATTCATTTCACG CCTTTGTTGAATTACCAGGTCCACAAAGAAAACGCCCCTGAATGTTTAAACATCACCATGTTTACAGAATGTTCTGATAAAGGAATCATACTGATGCGGGGAGAATATGATACCAAAGTAATCAATGCACAGG ]
[-] EMBL CNS08NJK [ GTTGAAAGGAAAAAATCCGTACTTCGAAAAGTACGCTAGC AAAATCGCCGCGGTGCAGCAAAATTCACCAGAAGAATTCCTATCCCGGTTAGAAAAT GTGGATAAAG AAAAG AAAAAGCCT AAGTTTGGACTTGCTGAAGTGCAACGTGACTATTCGGAACTTCTC AAACCC AAAGCTCCACTCGGAACCG AAGCATCGCGAGACATTACGCATCGCAAACTGAGTGATGTTATGCGGCTGGAGTTGATTGAAGATAAGTCTGCAGACGACATCAAGCATTTATGGCTGGAATATCATAGGGATAAAGATGTCATAACGGCTGCAATACCAGTTGATCAATTCAACCAAATGATGGAATGTGCAAAGCAGTACCCAGTGTTTATACTTCCTATTCCTCGAAGCGAAGGGTACGAGTTCATAATGCTACAATTTGCAGCTAA CACTATTCATTTTAC ]
[+] EMBL CNS08M8D [ TC TAACCC AAAGCTCCACTCGGAACCG TAGCATCGCGAGTCATTACGCATCGCAAACTGAGTGATGTTATGCGGCTGGAGTTGATTGTAGATAAGTCTGCAGACGACATCATGCATTTATGGC ]
[-] EMBL CNS09QKY [ TGCGGCTGGAGTTGATTGAAGATAAGTCTGCAGACGACATCAAGCATTTTTTGCTGGAATATCATAGGGATAAAGATGTCATAACGGCTGCAATACCAGTTGATCAATTCAACCAAATGATGGAATGTGCAAAGCAGTACCCAGTTTTTATACTTCCTATTCCTCGAAGCGAAGGGTACGAGTTCATAATGCTACAATTTGCAGCTAA CACTATTCATTTCACG CCTTTGTTAAATTACCAGGTCCACAAAGAAAACGCCCCTGAATGTTTAAACATCACCATGTTTACAGAATGTTCTGATAAAGGAATCATACTGATGCGGGGAGAATATGATACCAAAGTAATCAATGCACAGGAAGCACAGTGTTTAGCAAATCAAGTCCAACTTTATTATTGTCAGAAGAATGTATCTAAATTGCATCTGCTTGAAACGTTTACTAGACATCCGGATAAGTTCAAACACATGGACATCATCGAGGAGTTGAACAATTTGAAAATTTAATTGTTTTTTCTTATGAAGGTACTTAATTGTTATCAGAACATAGCTTCCT GGGAGTCC TGTATTGTTG TGCAG CCAATATATC TGCGATAA ]
[-] EMBL CNS0972W [ CAGTGTTTAGCAAATCAAGTCCAACTTTATTATTGTCAGAAGAATGTATCTAAATTGCATCTGCTTGAAACGTTTACTAGACATCCGGATAAGTTCAAACACATGGACATCATCGAGGAGTTGAACAATTTGAAAATTTAATTGTTTTTTCTTATGAAGGTACTTAATTGTTATCAGAACATAACTTCCT GGGAGTCC TGTATTGTTGTTGCAG CCAATATATCTTGCGATAAATATACCCGGGGGCCTGCAAAAAGAGAAA ]
consensusID : consensus_10176#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 872 fasta sequence
[CGGCCACGAGGTGAAACATTACGCATCGCAAACTGAGCTGATGTTATGCGGCTGGAGTTGATTGAAGATAAGTCTGCAGACGACATCAAGCATTTATGGCTGGAATATCATAGGGATAAAGATGTCATAACGGCTGCAATACCAGTTGATCAATTCAACCAAATGATGGAATGTGCAAAGCAGTACCCAGTGTTTATACTTCCTATTCCTCGAAGTGAAGGGTACGAGTTCATAATGCTACAATTTGCAGCTAACACTATTCATTTCACGCCTTTGTTGAATTACCAGGTCCACAAAGAAAACGCCCCTGAATGTTTAAACATCACCAT-GTTTACAGAATGTTCTGATAAAGGAATCATACTGATGCGGGGAGAATATGATACCAAAGTAATCAATGCACAGGAAGCACAGTGTTTAGCAAATCAAGTCCAACTTTATTATTGTCAGAAGAATGTATCTAA-ATTGCATCTGCTTGAAACGT-TTACTAGACATCCGGATAAGTTCAAACACATGGA-CATCATCGAGGAGTTGAACAATTTGAAAATTTAATTGT--TTTTTCTTATGAAGGTACTTAA-T-TGTTATCAGAACATAG-CTTC-CT-GGGAGTCCTGTATTGTT-GTTGCAGCCAATATATCTTGCGATAAATATACCGGGGTGCCTGC-AAAATTTTCGTTTGACTCAAGATAGTTAATCGTTTGAAAATGATTTGGAAAAGTATTGTTCATTATCGTTTCATTAGATGGAGTGCCAAAATCAAATCTTCGGTCGGTACTAATTCCATCGATGTTGAAATCTTCATCCTTAAGCAACCCATTTTTTTTTTCCGTCAAG-AAATCGTCCCTGGCAATTAGATCTACAAGAAAGGGGGATTCATC]
[+] EMBL BX469621 [CGGCCACGAGGTGAAACATTACGCATCGCAAACTGAGCTGATGTTATGCGGCTGGAGTTGATTGAAGATAAGTCTGCAGACGACATCAAGCATTTATGGCTGGAATATCATAGGGATAAAGATGTCATAACGGCTGCAATACCAGTTGATCAATTCAACCAAATGATGGAATGTGCAAAGCAGTACCCAGTGTTTATACTTCCTATTCCTCGAAGTGAAGGGTACGAGTTCATAATGCTACAATTTGCAGCTAACACTATTCATTTCACGCCTTTGTTGAATTACCAGGTCCACAAAGAAAACGCCCCTGAATGTTTAAACATCACCAT GTTTACAGAATGTTCTGATAAAGGAATCATACTGATGCGGGGAGAATATGATACCAAAGTAATCAATGCACAGGAAGCACAGTGTTTAGCAAATCAAGTCCAACTTTATTATTGTCAGAAGAATGTATCTAAGATTGCATCTGCTTGAAACGTNTTACTAGACATCCGGATAAGTTCAAACACATGGAGCATCATCGAGGAGTTGAACAATTTGAAAATTTAATTGTAATGNGTCTTATGAAGGTACTTAAGTCTGTTATCAGAACATAGACTTC CTGGGGAGTCCTGTATNGTTGGTCGCAGCCAATATATCTTGCGATAAATATACCGGGGTGC ]
[-] EMBL CNS096NA [ GATAAGTCTGCAGACGACATCAAGCATTTATGGCTGGAATATCATAGGGATAAAGATGTCATAACGGCTGCAATACCAGTTGATCAATTCAACCAAATGATGGAATGTGCAAAGCAGTACCCAGTGTTTATACTTCCTAT ]
[-] EMBL CNS08M8E [ ACGCCTTTGTTAAATTACCAGGTCCACAAAGAAAACGCCCCTGAATGTTTAAACATCACCATAGTTTACAGAATGTTCTGATAAAGGAATCATACTGATGCGGGGAGAATATGATACCAAAGTAATCAATGCACAGGAAGCACAGTGTTTAGCAAATCAAGTCCAACTTTATTATTGTCAGAAGAATGTATCTAA ATTGCATCTGCTTGAAACGT TTACTAGACATCCGGATAAGTTCAAACACATGGA CATCATCGAGGAGTTGAACAATTTGAAAATTTAATTGT TTTTTCTTATGAAGGTACTTAA T TGTTATCAGAACATAG CTTCACT GGGAGTCCTGTATTGTT GTTGCAGCCAATATATCTTGCGATAAATATACCGGGGTGCCTGCTAAAATTTTCGTTTGACTCta ]
[-] EMBL CNS0971U [ ttttATAAAGGAATCATACTGATGCGGGGAGAATATGATACCAAAGTAATCAATGCACAGGAAGCACAGTGTTTAGCAAATCAAGCCCAACTTTATTATTGTCAGAAGAATGTATCTAA ATTGCATCTGCTTGAAACGT TTACTAGACACCCGGATAAGTTCAAACACATGGA CATCATCGAGGAGTTGAACAATTTGAAAATTTAATTGT TTTTTTTTATGAAGGTACTTAA T TGTTATCAGAACATAA CTTC CT GGGGGTCCTGTAT ]
[+] EMBL CNS08L9G [ tttTTTATTATTGTCAGAAGAATGTATCTAA ATTGCATCTGCTTG AACGT TTACTAGACATCCGGATAAGTTCAAACACATGGA CATCATCGAGGAGTTGAACAATTTGAAAATTTAATTGT TTTTTCTTATGAAGGTACTTAA T TGTTATCAGAACATAG CTTC CT GGGAGTCCTGTATTGTT GTTGCAGCCAATATATCTTGCGATAAATATACCGGGGTGCCTGC AAAATTTTCGTTTGACTCAAGATAGTTAATCGTTTGAAAATGATTTGGAAAAGTATTGTTCATTATCGTTTCATTAGATGGAGTGCCAAAATCAAATCTTCGGTCGGTACTAATTCCATCGATGTTGAAATCTTCATCCTTAAGCAACCCATTTTTTTTTTCCGTCAAG AAATCGTCCCTGGCAATTAGATCTACAAGAAAGGGGGATTCATC]
[+] EMBL CNS08D7T [ TATTGTCAGAAGAATGTATCTAA ATTGCATCTGCTTGAAACGT TTACTAGACATCCGGATAAGTTCAAACACATGGA CATCATCGAGGAGTTGAACAATTTGAAAATTTAATTGT TTTTTCTTATGAAGGTACTTAA T TGTTATCAGAACATAG CTTC CT GGGAGTCCTGTATTGTT GTTGCAGCCAATATATCTTGCGATAAATATACCGGGGTGCCTGC AAAATTTTCGTTTGACTCAAGATAGTTAATCGTTTGAAAATGATTTGGAAAAGTATTGTTCATTATCGTTTCATTAGATGGAGTGCCAAAATCAAATCTTCGGTCGGTACTAATTCCATCGATGTTGAAATCTTCATCCTTAAGCAACCCATCCAGTTTTTCCGTCAAGAAAATCGTCCCTGGCAATTAGATCTAAAAAAAAaa ]
[-] EMBL CNS08LLQ [ AGACATCCGGATAAGTTCAAAAACATGGA CATCATCGAGGAGTTGAACAATTTGAAAATTTAATTGT TTTTTCTTATGAAGGTACTTAA T TGTTATCAGAACATAG CTTC CT GGGAGTCCTGTATTGTT GTTGCAGCCAATATTTCTTGCGATAAATATACCGGGGTGCCTGC AAAATTTTCGTTTCACTCAAG ]
consensusID : consensus_10176#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 294 fasta sequence
[GCACAGGAAGCACAGTTGTTTAGCAAATCAAGTCCAAGCTTTTATTATTTGTCAGAAGAATGTATCTAAATTGCATCTGCTTGAAACGTTTACTAGACATCCGGATAAGTTCAAACACATGGACATCATCGAGGAGTTGAACAATTTGAAAATTTAATTGTTTTTTCTTATGAAGGTACTTAATTGTTATCAGAACATAGCTTCCTGGGAGTCCTGTATTGTTGTTGCAGCCAATATATCTTGCGATAAATATACCGGGGTGCCTGCAAAATTTTCGTTTAGAAAAATAAATAC]
[-] EMBL CNS08VZ7 [GCACAGGAAGCACAGTTGTTTAGCAAATCAAGTCCAAGCTTTTATTATTTGTCAGAAGAATGTATCTAAATTGCATCTGCTTGAAACGTTTACTAGACATCCGGATAAGTTCAAACACATGGACATCATCGAGGAGTTGAACAATTTGAAAATTTAATTGTTTTTTCTTATGAAGGTACTTAATTGTTATCAGAACATAGCTTCCTGGGAGTCCTGTATTGTTGTTGCAGCCAATATATCTTGCGATAAATATACCGGGGTGCCTGCAAAATTTTCGTTTAGAAAAATAAATAC]
[-] EMBL CNS08N4W [ ATAAGTTCAAACACATGGACATCATCGAGGAGTTGAACAATTTGAAAATTTAATTGTTTTTTCTTATGAAGGTACTTAATTGTTATCAGAACATAGCTTCCTGGGAGTCCTGTATTGTTGTTGCAGCCAATATATCTTGCGATAAATATACCGGGG GCCTG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10176#1 ------------------------------------------------------------
consensus_10176#2 ------------------------------------------------------------
consensus_10176#0 CCGCCCACGCCGGTACAAAACGTAAAACCTAGAAGTTTATTAATGGCAGCAATTTCAATC 60
consensus_10176#1 ------------------------------------------------------------
consensus_10176#2 ------------------------------------------------------------
consensus_10176#0 TTCAGTCGCTTCCTTTTACGATCAAAACAGTTTGCATCCTTACGAAGCTTCCACATGTCC 120
consensus_10176#1 ------------------------------------------------------------
consensus_10176#2 ------------------------------------------------------------
consensus_10176#0 TCCGCACGAGAAAGATCTGAAAAGGTTTTAGAAGAGTTGAAAGGAAAAAATCCGTACTTC 180
consensus_10176#1 ------------------------------------------------------------
consensus_10176#2 ------------------------------------------------------------
consensus_10176#0 GAAAAGTACGCTAGCAAAATCGCCGCGGTGCAGCAAAATTCACCAGAAGAATTCCTATCC 240
consensus_10176#1 ------------------------------------------------------------
consensus_10176#2 ------------------------------------------------------------
consensus_10176#0 CGGTTAGAAAATGTGGATAAAGAAAAGAAAAAGCCTAAGTTTGGACTTGCTGAAGTGCAA 300
consensus_10176#1 -------------------------------------------CGGCCACGAGGTGAAAC 17
consensus_10176#2 ------------------------------------------------------------
consensus_10176#0 CGTGACTATTCGGAACTTCTCAAACCCAAAGCTCCACTCGGAACCGAAGCATCGCGAGAC 360
consensus_10176#1 ATTACGCATCGCAAACTGAGCTGATGTTATGCGGCTGGAGTTGATTGAAGATAAGTCTGC 77
consensus_10176#2 ------------------------------------------------------------
consensus_10176#0 ATTACGCATCGCAAACTGAG-TGATGTTATGCGGCTGGAGTTGATTGAAGATAAGTCTGC 419
consensus_10176#1 AGACGACATCAAGCATTTATGGCTGGAATATCATAGGGATAAAGATGTCATAACGGCTGC 137
consensus_10176#2 ------------------------------------------------------------
consensus_10176#0 AGACGACATCAAGCATTTATGGCTGGAATATCATAGGGATAAAGATGTCATAACGGCTGC 479
consensus_10176#1 AATACCAGTTGATCAATTCAACCAAATGATGGAATGTGCAAAGCAGTACCCAGTGTTTAT 197
consensus_10176#2 ------------------------------------------------------------
consensus_10176#0 AATACCAGTTGATCAATTCAACCAAATGATGGAATGTGCAAAGCAGTACCCAGTGTTTAT 539
consensus_10176#1 ACTTCCTATTCCTCGAAGTGAAGGGTACGAGTTCATAATGCTACAATTTGCAGCTAACAC 257
consensus_10176#2 ------------------------------------------------------------
consensus_10176#0 ACTTCCTATTCCTCGAAGCGAAGGGTACGAGTTCATAATGCTACAATTTGCAGCTAACAC 599
consensus_10176#1 TATTCATTTCACGCCTTTGTTGAATTACCAGGTCCACAAAGAAAACGCCCCTGAATGTTT 317
consensus_10176#2 ------------------------------------------------------------
consensus_10176#0 TATTCATTTCACGCCTTTGTTAAATTACCAGGTCCACAAAGAAAACGCCCCTGAATGTTT 659
consensus_10176#1 AAACATCACCATGTTTACAGAATGTTCTGATAAAGGAATCATACTGATGCGGGGAGAATA 377
consensus_10176#2 ------------------------------------------------------------
consensus_10176#0 AAACATCACCATGTTTACAGAATGTTCTGATAAAGGAATCATACTGATGCGGGGAGAATA 719
consensus_10176#1 TGATACCAAAGTAATCAATGCACAGGAAGCACAGT-GTTTAGCAAATCAAGTCCAA--CT 434
consensus_10176#2 -------------------GCACAGGAAGCACAGTTGTTTAGCAAATCAAGTCCAAGCTT 41
consensus_10176#0 TGATACCAAAGTAATCAATGCACAGGAAGCACAGT-GTTTAGCAAATCAAGTCCAA--CT 776
**************** ******************** *
consensus_10176#1 TTATTATT-GTCAGAAGAATGTATCTAAATTGCATCTGCTTGAAACGTTTACTAGACATC 493
consensus_10176#2 TTATTATTTGTCAGAAGAATGTATCTAAATTGCATCTGCTTGAAACGTTTACTAGACATC 101
consensus_10176#0 TTATTATT-GTCAGAAGAATGTATCTAAATTGCATCTGCTTGAAACGTTTACTAGACATC 835
******** ***************************************************
consensus_10176#1 CGGATAAGTTCAAACACATGGACATCATCGAGGAGTTGAACAATTTGAAAATTTAATTGT 553
consensus_10176#2 CGGATAAGTTCAAACACATGGACATCATCGAGGAGTTGAACAATTTGAAAATTTAATTGT 161
consensus_10176#0 CGGATAAGTTCAAACACATGGACATCATCGAGGAGTTGAACAATTTGAAAATTTAATTGT 895
************************************************************
consensus_10176#1 TTTTTCTTATGAAGGTACTTAATTGTTATCAGAACATAGCTTCCTGGGAGTCCTGTATTG 613
consensus_10176#2 TTTTTCTTATGAAGGTACTTAATTGTTATCAGAACATAGCTTCCTGGGAGTCCTGTATTG 221
consensus_10176#0 TTTTTCTTATGAAGGTACTTAATTGTTATCAGAACATAGCTTCCTGGGAGTCCTGTATTG 955
************************************************************
consensus_10176#1 TTGTTGCAGCCAATATATCTTGCGATAAATATACCGGGGTGCCTGCAAAATTTTCGTTTG 673
consensus_10176#2 TTGTTGCAGCCAATATATCTTGCGATAAATATACCGGGGTGCCTGCAAAATTTTCGTTTA 281
consensus_10176#0 TTGTTGCAGCCAATATATCTTGCGATAAATATACCGGGGTGCCTTCAAAAAAAAAAAAAA 1015
******************************************** *****
consensus_10176#1 ACTCAAGATAGTTAATCGTTTGAAAATGATTTGGAAAAGTATTGTTCATTATCGTTTCAT 733
consensus_10176#2 GA--AAAATAAATAC--------------------------------------------- 294
consensus_10176#0 AAAAAAAA---------------------------------------------------- 1023
** *
consensus_10176#1 TAGATGGAGTGCCAAAATCAAATCTTCGGTCGGTACTAATTCCATCGATGTTGAAATCTT 793
consensus_10176#2 ------------------------------------------------------------
consensus_10176#0 ------------------------------------------------------------
consensus_10176#1 CATCCTTAAGCAACCCATTTTTTTTTTCCGTCAAGAAATCGTCCCTGGCAATTAGATCTA 853
consensus_10176#2 ------------------------------------------------------------
consensus_10176#0 ------------------------------------------------------------
consensus_10176#1 CAAGAAAGGGGGATTCATC 872
consensus_10176#2 -------------------
consensus_10176#0 -------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||