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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10342#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 2082 fasta sequence
[CCGCCCACGCGTCCGCAGTTCTCCTGTTTCGAGTGCTATAATGTGCTGGTTACGCGCCGTATCACAAATAAGTGTAATTTTTTTAGCCTGTACCAACGGAGGACAGCCATCCTACAGGAGTCAGCCAATTTACGGAAATAAACAACGCTACTACGGAAATCAGCAATACTACTACGTAAAACCACTACAACCCGAATACAAATGCATTGAGAAAAATCTGCAGTACGACTGCGTGTTCTACAATGTGCACATTGACATGCAATCGCAAGACGTATACTTTGGCTTTGATGATATAACACTAAACAACCAGAAGAATGTTACCTTCAAAAACTCTACCATGCGCAAACTGCCCGCTGCTTCACTCGCCTCCTTCCGCCAGGTTGAGGTGCTCAATCTGAACGGCCTGCAGATAGAGGAGATCGATACGAACGCGTTCGCTTACGCGCACACTATTCAGAAGCTGTACATGGGATTCAATGCGATTCGATATTTGCCACCACACGTGTTTCAGAACGTCCCATCGCTCACGGTGCTTGTGCTGGAACGGAACGATTTAACCAGCCTGCCACGCGGAATCTTCCACAACACACCCAAGCTCACCATGCTGTCGATGTCAAACAACAACCTGGAGCGCATCGAAGACGAAACTTTCCAAGCGACTACAGCGCTTCAAAATCTGCAACTGTCCAGCAACAGGCTTACGCATGTTGACCTTTCTCTCATTCCCAGTCTCTTCCACGTCAACGTCAGTTACAACCTGCTCTCTACGCTTGCCATACCGATCGCGGTCGAAGAGCTAGACGCATCGCACAATAGCATCAACGCCGTACGCGGGCCCGTCAACGTGGAGTTGACCATTCTGAAGCTGCAACACAACAACTTGACTGACACTGCCTGGCTGCTGAACTATCCCGGACTGGTTGACGTGGATCTTTCCTACAACCAGTTGGAGAAGATAACTTACCAACACTTTGTCAAAATGCAGCGCTTGGAGCGACTGTACGTCTCCAACAACCACCTTGTGGCGCTCAATCTTTACAGTCAACCCATCCCAACGCTCAAAGTGCTCGATCTGTCGCACAACCATCTGCTGCACGTGGAACGTAACCAGCCGCAGTTTGATAGGGTGGAGTACCTTTACCTTGACCACAACTCCATCGTGACGCTTAAGCTTAGCACCAGTCATACGCTAAAGAATCTTACACTATCGCATAATGACTGGGATTGTAACAGTTTACGTGCACTTTTCAGAAACGTAGCCCATCCTGCAGTACACGATGCTGACCAGCACTGCAAGATCGACTACCAACTCGAGCAGGGTCTCTGCTGCAAAGAAAGTGACAAGCCGTATCTGGACCGGCTATTACAGTACATTGCCCTGACGAGCGTGGTGGAGAAGTTGCAGCGTGCACAAGGACGCTGCAGTGCCACAGATACCATCAACAGCGTGCAAAGTCTGTCCCACTACATCACACAGCAGGGTGATGTGCCACTGCAGGGTAACGAACAGCTCGAGGCCGAAGTCAACGAGCTGAGGGCTGAGGTGCAGCAGCTAACCAACGAGCAGATACAACAGGAGCAGCTGCTGCAGGGGCTACACGCCGAGATCGATACCAATCTGCGACGGTACCGCCTGCCGAAGGATGGACTAGCGC-GCTCGAGCGATAATCTAAATAAAGTGTTCACCCATCTGAAAGAGCGGCACGCGTTTAAGTTGCGCGAAACGCAGGCACGCCGCACGGAGGCGAATGCTAAGCAGAAGGAAACGGAGGACCTGGAACAGGAAAACATTGCGCTCGAGAAGCAGTTGGATAATAAGAAGGCAAAGCAGGCTGAGTTGAGACAGGAGACGTCGCTGAAGCGCCAAAAAGTGAAGCAATTAGAGGCCAAGAAGAACCGCAAT-CCAGATACGCGTCGCGTTACAAAGTAGTAGGCAAAGCACCTGTGTGTGTATGATTTTACTTGATCTAAGCATGTAACGGAAAT-------ATTTCGAATGCCATTTTTACAAAATAAAAAGACATAACTTTTTCAGTTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTCCCCGGGCG]
[+] EMBL BM591790 [CCGCCCACGCGTCCGCAGTTCTCCTGTTTCGAGTGCTATAATGTGCTGGTTACGCGCCGTATCACAAATAAGTGTAATTTTTTTAGCCTGTACCAACGGAGGACAGCCATCCTACAGGAGTCAGCCAATTTACGGAAATAAACAACGCTACTACGGAAATCAGCAATACTACTACGTAAAACCACTACAACCCGAATACAAATGCATTGAGAAAAATCTGCAGTACGACTGCGTGTTCTACAATGTGCACATTGACATGCAATCGCAAGACGTATACTTTGGCTTTGATGATATAACACTAAACAACCAGAAGAATGTTACCTTCAAAAACTCTACCATGCGCAAACTGCCCGCTGCTTCACTCGCCTCCTTCCGCCAGGTTGAGGTGCTCAATCTGAACGGCCTGCAGATAGAGGAGATCGATACGAACGCGTTCGCTTACGCGCACACTATTCAGAAGCTGTACATGGGATTCAATGCGATTCGATATTTGCCACCACACGTGTTTCAGAACGTCCCATCGCTCACGGTGCTTGTGCTGGAACGGAACGATTTAACCAGCCTGCCACGCGGAATCTTCCACAACACACCCAAGCTCACCATGCTGTCGATGTCAAACAACAACCTGGAGCGCATCGAAGACGAAACTTTCCAAGCGACTACA ]
[+] EMBL BM597156 [ ccGGTGCTCAATCTGAACGGCCTGCAGATAGAGCAGATCGATACGAACGCGTTCGCTTACGCGCACACTATTCAGAAGCTGTACATGGGATTCAATGCGATTCGATATTTGCCACCGTACGTGTTTCAGAACGTCCCACTGCTCACGGTGCTTGTGCTGGAACGGAACGATTTAACCAGCCTGCCACGCGGAATCTTCCACAACACACCCAAGCTCAGCATGCTGTCGATGTCAAACAACAACCTGGAGCGCATCGAAGACGACACTTTCCAAGCGACTACAGCGCTTCAAAATCTGCAACTGTCCAGCAACAGGCTTACGCATGTTGACCTTTCTCTCATTCCCAGTCTCTTCCACGTCAACGTCAGTTACAACCTGCTCTCTACGCTTGCCATACCGATCGCGGTCGAAGAGCTAGACGCATCGCACAATAGCATCAACGCCGTACGCGGGCCCGTCAACGTGGAGTTGACCATTCTGAAGCTGCAACACAACAACTTGACTGACACTGCCTGGCTGCTGAACTATCCCGGACTGGTTGACGTGGATCTTTCCTACAACCAGTTGGAGAAGATAACTTACCAACACTTTGTCAAAATGCAGCGCTTGGAGCGACTGTACGTCTCCAACAACCACCTTGTGGCGCTCAATCTTTA ]
[+] EMBL BX606657 [ ATACCGATTGCGGTCGAAGAGCTAGACGCATCGCACAATAGCATCAACGCCGTACGCGGGCCCGTCAACGTGGAGTTGACCATTCTGAAGCTGCAACACAACAACTTGACTGACACTGCCTGGCTGCTGAACTATCCCGGACTGGTTGACGTGGATCTTTCCTACAACCAGTTGGAGAAGATAACTTACCAACACTTTGTCAAAATGCAGCGCTTGGAGCGACTGTACGTCTCCAACAACCACCTTGTGGCGCTCAATCTTTACAGTCAACCCATCCCAACGCTCAAAGTGCTCGATCTGTCGCACAACCATCTGCTGCACGTGGAACGTAACCAGCCGCAGTTTGATAGGGTGGAGTACCTTTACCTTGACCACAACTCCATCGTGACGCTTAAGCTTAGCACCAGTCATACGCTAAAGAATCTTACACTATCGCATAATGACTGGGATTGTAACAGTTTACGTGCACTTTTCAGAAACGTAGCCCATCCTGCAGTACACGATGCTGACCAGCACTGCAAGATCGACTACCAACTCGAGCAGGGTCTCTGCTGCAAAGAAAGTGACAAGCCGTATCTGGACCGGCTATTACAGTACATTGCCCTGACGAGCGTGGTGGAGAAGTTGCAGCGTGCACAAGGACGCTGCAG ]
[+] EMBL BX604871 [ GAAGCTGCAACACAACAACTTGACTGACACTGCCTGGCTGCTGAACTATCCCGGACTGGTTGACGTGGATCTTTCCTACAACCAGTTGGAGAAGATAAC TACCAACACTTTGTCAAAATGCAGCGCTTGGAGCGACTGTACGTCTCCAACAACCACCTTGTGGCGCTCAATCTTTACAGTCAACCCATCCCAACGCTCAAAGTGCTCGATCTGTCGCACAACCATCTGCTGCACGTGGAACGTAACCAGCCGCAGTTTGATAGGGTGGAGTACCTTTACCTTGACCACAACTCCATCGTGACGCTTAAGCTTAGCACCAGTCATACGCTAAAGAATCTTACACTATCGCATAATGACTGGGATTGTAACAGTTTACGTGCACTTTTCAGAAACGTAGCCCATCCTGCAGTACACGATGCTGACCAGCACTGCAAGATCGACTACCAACTCGAGCAGGGTCTCTGCTGCAAAGAAAGTGACAAGCCGTATCTGGACCGGCTATTACAGTACATTGCCCTGACGAGCGTGGTGGAGAAGTTGCAGCGTGCACAAGGACGCTGCAGTGCCACAGATACCATCAACAGCGTGCAAAGTCTGTCCCACTACATCACACAGCAGGGTGATGTGCCACTGCAGGGTAACGAACAGCTCGAGGCCGAAGTCAACGAGCTG ]
[+] EMBL BX611042 [ GGATCTTTCCTACAACCAGTTGGAGAAGATAACTTACCAACACTTTGTCAAAATGCAGCGCTTGGAGCGACTGTACGTCTCCAACAACCACCTTGTGGCGCTCAATCTTTACAGTCAACCCATCCCAACGCTCAAAGTGCTCGATCTGTCGCACAACCATCTGCTGCACGTGGAACGTAACCAGCCGCAG TTGATAGGGTGGAGTACCTTTACCTTGACCACAACTCCATCGTGACGCTTAAGCTTAGCACCAGTCATACGCTAAAGAATCTTACACTATCGCATAATGACTGGGATTGTAACAGTTTACGTGCACTTTTCAGAAACGTAGCCCATCCTGCAGTACACGATGCTGACCAGCACTGCAAGATCGACTACCAACTCTAGCAGGGTCTCTGCTGCAAAGAAAGTGACAAGCCGTATCTGGACCGGCTATTACAGTACATTGCCCTGACGAGCGTGGTGGAGAAGTTGCAGCGTGCACAAGGACGCTGCAGTGCCACAGATACCATCAACAGCGTGCAAAGTCTGTCCCACTACATCACACAGCAGGGTGATGTGCCACTGCAGGGTAACGAACAGC ]
[+] EMBL BX613253 [ GTCAAAATGCAGCGCTTGGAGCTACTGTACTTCTCCAACAACCACCTTGTGGCGCTCAATCTTTACAGTCAACCCATCCCAACGCTCAAAGTGCTCGATCTGTCGCACAACCATCTGCTGCACGTGGAACGTAACTAGCCGCAGTTTGATAGGGTGGAGTACCTTTACCTTGACCACAACTCCATCGTGACGCTTAAGCTTAGCACCAGTTATACGCTAAAGAATCTTACACTATCGCATAATGACTGGGATTGTAACAGTTTACGTGCACTTTTCAGAAACGTAGCCCATCCTGCAGTACACGATGCTGACCAGCACTGCAAGATCGACTACCAACTCGAGCAGGGTCTCTGCTGCAAAGAAAGTGACAAGCCGTATCTGGACCGGCTATTACAGTACATTGCCCTGACGAGCGTGGTGGAGAAGTTGCAGCGTGCACAAGGACGCTGCAGTGCCACAGATACCATCAACAGCGTGCAAAGTCTGTCCCACTACATCACACAGCAGGGTGATGTGCCACTGCAGGGTAACGAACAGCTCGAGGCCGAAGTCAACGAGCTGAGGGCTGAGGTGCAGCAGCTAACCAACGAGCAGATACAACAGGAGCAGCTGCTGCAGGGGCTACACGCCGAGATCGATACCAATCTGCGACGGTACCGCCTGCCGAAGGATGGACTAGCGC GCTCGAGCGATAATCTAAATAAAGTGTTCACCCATCTGAAAGAGCGGCACGCGTTTAAGTTGCGCGAAACGCAGGCACGCCGCACGGAGGCGAATGCTAAGCAGAAGGAAACGGAGGACCTGGAACAGGAAAACATTGCGCTCGAGAAGCA ]
[+] EMBL BX605259 [ CCATCCCAACGCTCAAAGTGCTCGATCTGTCGCACAACCATCTGCTGCACGTGGAACGTAACCAGCCGCAGTTTGATAGGGTGGAGTACCTTTACCTTGACCACAACTCCATCGTGACGCTTAAGCTTAGCACCAGTCATACGCTAAAGAATCTTACACTATCGCATAATGACTGGGATTGTAACAGTTTACGTGCACTTTTCAGAAACGTAGCCCATCCTGCAGTACACGATGCTGACCAGCACTGCAAGATCGACTACCAACTCGAGCAGGGTCTCTGCTGCAAAGAAAGTGACAAGCCGTATCTGGACCGGCTATTACAGTACATTGCCCTGACGAGCGTGGTGGAGAAGTTGCAGCGTGCACAAGGACGCTGCAGTGCCACAGATACCATCAACAGCGTGCAAAGTCTGTCCCACTACATCACACAGCAGGGTGATGTGCCACTGCAGGGTAACGAACAGCTCGAGGCCGAAGTCAACGAGCTGAGGGCTGAGGTGCAGCAGCTAACCAACGAGCAGATACAACAGGAGCAGCTGCTGCAGGGGCTACACGCCGAGATCGATACCAATCTGCGACGGTACCGCCTGCCGAAGGATGGACTAGC ]
[+] EMBL BX611997 [ CGTGGAACGTAACCAGCCGCAGTTTGATAGGGTGGAGTACCTTTACCTTGACCACAACTCCATCGTGACGCTTAAGCTTAGCACCAGTCATACGCTAAAGAATCTTACACTATCGCATAATGACTGGGATTGTAACAGTTTACGTGCACTTTTCAGAAACGTAGCCCATCCTGCAGTACACGATGCTGACCAGCACTGCAAGATCGACTACCAACTCGAGCAGGGTCTCTGCTGCAAAGAAAGTGACAAGCCGTATCTGGACCGGCTATTACAGTACATTGCCCTGACGAGCGTGGTGGAGAAGTTGCAGCGTGCACAAGGACGCTGCAGTGCCACAGATACCATCAACAGCGTGCAAAGTCTGTCCCACTACATCACACAGCAGGGTGATGTGCCACTGCAGGGTAACGAACAGCTCGAGGCCGAAGTCAACGAGCTGAGGGCTGAGGTGCAGCAGCTAACCAACGAGCAGATACAACAGGAGCAGCTGCTGCAGGGGCTACACGCCGAGATTGATACCAATCTGCGACGGTACCGCCTGCCGAAGGATGGACTAGCGC GCTCGAGCGATAATCTAAATAAAGTGTTCACCCATCTGAAAGAGCGGCACGCGTTTAAGTTGCGCGAAACGCAGGCACGCCGCACGG ]
[+] EMBL CNS08SQZ [ GCTTAAGCTTAGCACCCATCATACGCTGAACACTCTTACACTATCGCATAATGACTGGGATTGTAACAGTTTACGTGCACTTTTCAGAAACGTAGCCCAACCTGTGGTAGACGATGCTGACCAGCATTGCAAGATCGACTACCAACTCGAGCACGGTCTCTGCTGCAAAGAAAGTGACAAGCCGTATCTGGACCGGCTATTACAGTACATCGCCCTGTCGAGCGTGTTGGAGAAACAGCAGCGTGCACAAGGACGCTGCAGTGCCACAGATACCATCAACAGCGCGCAAAGTCTGTCTCACTACATCACTCAGCAGGGTGATGTGCCACTGCAGGGTAACGAACAGCTCGAGGCTGAAGTGAACGAGCTGAGGGATGAGGTGCAGAAGCTAGCCAACGAGCAGATACAACAGGAGCAGCTGCTGCAGGGGCTACACGCCGAGATCGATACCAATCTGCGACGGTACCGCCTGCCCAAGGATGGACTAGCGC GCTCGAGCGATAATCTAAATAAAGTGTTCACCCATCTGAAGGAGCGGCACGCTTTTAAGTTGGGCGAAACGCAGGCACGCCGCACGGAGGCGGATGCTAAGCAGAAGGAAACGGAGGACCTGGAACA GAAAACATTGCGCTCGAGAAGCAGTTGGATAATAAGAGGGCAAAGCAGGCTGAGTTGAGACAGGAGACGTCGCTGAAGCGCCAAAAAGTGAAGCAATTAGAGGCCAAGAAGAACCGCAAT CCAGATACGCGTCGGTTTACAAAGTAGTAGGCAAAGCACCTGTGTGTGTATGATTTTACTTGATCTAAGCATGTAACGGAAAT ATTTCGAATGCCATTTTTACAAAATAAAAAGACATAAC TTTTCAGTTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTCCCCGGGCG]
[-] EMBL CNS08SR0 [ GTAACAGTTTACGTGCACTTTTCAGAAACGTAGCCCAACCTGTGGTAGACGATGCTGACCAGCATTGCAAGATCGACTACCAAAACGAGCACGGTTTCTGCTGCAAAGAAAGTGACAAGCCGTTTCTGGACCGGCTATTACAGTACATCGCCCTGTCGAGCGTGTTGGAGAAAAAGCAGCGTGCACAAGGACGCTGCAGTGCCACAGATACCATCAACAGCGCGCAAAATTTTTCTCACTACATCACTCAGCAGGGTGATGTGCCACTGCAGGGTAACGAACAGCTCGAGGCTGAAGTGAACGAGCTGAGGGATGAGGTGCAGAAGCTAGCCAACGAGCAGATACAACAGGAGCAGCTGCTGCAGGGGCTACACGCCGAGATCGATACCAATCTGCGACGGTACCGCCTGCCCAAGGATGGACTAGCGC GCTCGAGCGATAATCTAAATAAAGTGTTCACCCATCTGAAGGAGCGGCACGCGTTTAAGTTGGGCGAAACGCAGGCACCCCGCACGGAGGCGGATGCTAAGCAGAAGGAAACGGAGGACCTGGGACAGGAAAACATTGCGCTCGAGAAGCAGTTGGATAATAAGAGGGCAAAGCAGGCTGAGTTGAGACAGGAGACGTCGCTGAAGCGCCAAAAAGTGAAGCAATTAGAGGCCAAGAAGAACCGCAAT CCAGATACGCGTCGCGTTACAAAGTAGTAGGCAAAGCACCTGTGTGTGTATGATTTTACTTGATCTAAGCATGTAACGGAAAT ATTTCGAATGCCATTTTTACAAAATAAAAAGACATAACTT ]
[+] EMBL BX611371 [ CAGTTTACGTGCACTTTTCAGAAACGTAGCCCATCCTGCAGTACACGATGCTGACCAGCACTGCAAGATCGACTACCAACTCGAGCAGGGTCTCTGCTGCAAAGAAAGTGACAAGCCGTATCTGGACCGGCTATTACAGTACATTGCCCTGACGAGCGTGGTGGAGAAGTTGCAGCGTGCACAAGGACGCTGCAGTGCCACAGATACCATCAACAGCGTGCAAAGTCTGTCCCACTACATCACACAGCAGGGTGATGTGCCACTGCAGGGTAACGAACAGCTCGAGGCCGAAGTCAACGAGCTGAGGGCTGAGGTGCAGCAGCTAACCAACGAGCAGATACAACAGGAGCAGCTGCTGCAGGGGCTACACGCCGAGATCGATACCAATCTGCGACGGTACCGCCTGCCGAAGGATGGACTAGCGC GCTCGAGCGATAATCTAAATAAAGTGTTCACCCATCTGAAAGAGCGGCACGCGTTTAAGTTGCGCGAAACGCAGGCACGCCGCACGGAGGCGAATGCTAAGCAGAAAGAAACGGAGGACCTGGAACAGGAAAACATTGCGCTCGAGAAGCAGTTGGATAATAAGAAGGCAAAGCAGGCTGAGTTGAGACAGGA ]
[+] EMBL AGA282867 [ GACCAGCACTGCAAGATCGACTACCAACTCGAGCAGGGTCTCTGCTGCAAAGAAAGTGACAAGCCGTATCTGGACCGGCTATTACAGTACATTGCCCTGACGAGCGTGGTGGAGAAGTTGCAGCGTGCACAAGGACGCTGCAGTGCCACAGATACCATCAACAGCGTGCAAAGTCTGTCCCACTACATCACACAGCAGGGTGATGTGCCACTGCAGGGTAACGDACAGCTCGAGGCCGAAGTCAACGAGCTGAGGGCTGAGGT ]
[+] EMBL BX608503 [ ACTACCAACTCGAGCAGGGTCTCTGCTGCAAAGAAAGTGACAAGCCGTATCTGGACCGGCTATTACAGTACATTGCCCTGACGAGCGTGGTGGAGAAGTTGCAGCGTGCACAAGGACGCTGCAGTGCCACAGATACCATCAACAGCGTGCAAAGTCTGTCCCACTACATCACACAGCAGGGTGATGTGCCACTGCAGGGTAACGAACAGCTCGAGGCCGAAGTCAACGAGCTGAGGGCTGAGGTGCAGCAGCTAACCAACGAGCAGATACAACAGGAGCAGCTGCTGCAGGGGCTACACGCCGAGATCGATACCAATCTGCGACGGTACCGCCTGCCGAAGGATGGACTAGCGCTGCTCGAGCGATAATCTAAATAAAGTGTTCACCCATCTGAAAGAGCGGCACGCGTTTAAGTTGCGCGAAACGCAGGCACGCCGCACGG ]
[+] EMBL BX617921 [ GGGTAACGAACAGCTCGAGGCCGAAGTCAACGAGCTGAGGGCTGAGGTGCAGCAGCTAACCAACGAGCAGAAACAACAGGAGCAGCTGCCGCAGGGGCTACACGCCGAGATCGATACCAATCTGCGACGGTACCGCCTGCCGAAGGATGGACTAGCGC GCTCGAGCGATA ]
[-] EMBL AGA281245 [ tacCAACAGGAGCAGCTGCTGCAGGGGCTACACGCCGAGATCGATACCAATCTGCGACGGTACCGCCTGCCGAAGGATGGACTAGCGC GCTCGAGCGATAATCTAAATAAAGTGTTCACCCATCTGAAAGAGCGGCACGCGTTTAAGTTGCGCGAAACGCAGGCACGCCGCACGGAGGCGAATGCTAAGCAGAAGGAAACGGAGGACCTGGAACAGGAAAACATTGCGCTCGAGAAGCAGTTGGATAATAAGAAGGCAAAGCAGGCTGAGTTGAGACAGGAGACGTCGCAGAAGCGCCAAAAAGTGAAGCAATTAGAGGCCAAGAAGAACCGCAATCCCAGATACGCGTCGCGTTACAAAGTAGTATGCAGAGCACCTGTGTGTGTATGATGTWACTTGGGCCAAGCATGTAACGGAAATATTCTAAATTTCGAATGCTATTTTTACAAAATAAAAAGACATAACTTTTTCAGTTGCAAACGAAAAAAAAAAAAA ]
[-] EMBL AGA280773 [ CGCTCGAGAAGCAGTTGGATAATAAGAAGGCAAAGCAGGCTGAGTTGAGACAGGAGACGTCGCAGAAGCGCCAAAAAGTGAAGCAATTAGAGGCCAAGAAGAACCGCAAT CCAGATACGCGTCGCGTTACAAAGTAGTATGCAGAGCACCTGTGTGTGTATGATGTTACTTGGGCCAAGCATGTAACGGAAATATTCTAAATTTCGAATGCTATTTTTACAAAATAAAAAGACATAACTTTTTCAGTTGCAAAAAAAA ]
consensusID : consensus_10342#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1088 fasta sequence
[CCGCCAGCCTCTGCCGATCGCACATTATCAGCATTGCGCGAGTGGAAGACCTCTCGCACATCTATACACACGCACTCTCTCCCTCTCTCTCTATTTATCTCTCTCACACATTCTCGGTGGTATTTGCTGAGAACAGTTCGTGCTAATACAAGTAGGTTTGTCTCCCTTTTACCCCATCACTACACTTTTCGGAATCTCAACAGTAAGAGATGTCTCCAAACACCTGTCCCAACCAATGATGTTGGATCGGTCCCAGCTTGTACTGTCGACATTTGCCCTCGAAAATCACCCCAGACTGTAACGCCGTTATCACTGGGAATTCCCGTAACGAATTCATCTTTCAGTGTGCTACGCTAGTTCTACCGCTGGAATGATTGCTCAGTTTCAATCCATCAGTCGCGGAAGAAACACAGTTTTCGAGCTTTTAGTACCACAATGTGCGGGTTACGCGCCGTATCACTAATCAGTGTGATTTTCTTCACTTGTGGTAGTGTTGCAGCTGTTGAGGGCAATAATTTTTGGTATCCGGAAGAGCAGCCTGTTGCGACCACCAAACCTTC-TTTCCCT-GGGAACGGATACTACAACTATGGAAGTCAGCCAGCCAACGAAGGTCACATAACCTACACAAGAGACACAAACTTCGGAGGCCAGTCAGCCAACGGAAATTTGCCAGCCAACGGAGGTCCAACCTACAGAAGTGAGACAAATTTCGGAGGTCAGTCCTCCAACGGTGGTCTGCTAGCTAACGGTGGTCTGCTAGCCAACGGAGGTCTTCCAGCCAACGGAGGTGTTCCAGCCAACGGAGGACTGCCAGCCAACAGAGGGCAGCTGCCGTACGGAACTTCAACCCATATAGGTCAGACAATCTACAGAAGTCAGCCAAATTACGGAGGTCAGCAACGCTACAACGTAAAACCACGACAGCCCGAATACAAATGCATTGACAGCAATCTGCAGTACGACTGTGTGTTCTACGATGTGCACATTGACATGCAAACGCAAGACGTATACTTTGGCTTTGAGGATATAACACTAAACAACCAGAAGATTGTTACCTTCAAAAACTCTACCATGCGCAAACTGCCCGC]
[+] EMBL BM657506 [CCGCCAGCCTCTGCCGATCGCACATTATCAGCATTGCGCGAGTGGAAGACCTCTCGCACATCTATACACACGCACTCTCTCCCTCTCTCTCTATTTATCTCTCTCACACATTCTCGGTGGTATTTGCTGAGAACAGTTCGTGCTAATACAAGTAGGTTTGTCTCCCTTTTACCCCATCACTACACTTTTCGGAATCTCAACAGTAAGAGATGTCTCCAAACACCTGTCCCAACCAATGATGTTGGATCGGTCCCAGCTTGTACTGTCGACATTTGCCCTCGAAAATCACCCCAGACTGTAACGCCGTTATCACTGGGAATTCCCGTAACGAATTCATCTTTCAGTGTGCTACGCTAGTTCTACCGCTGGAATGATTGCTCAGTTTCAATCCATCAGTCGCGGAAGAAACACAGTTTTCGAGCTTTTAGTACCACAATGTGCGGGTTACGCGCCGTATCACTAATCAGTGTGATTTTCTTCACTTGTGGTAGTGTTGCAGCTGTTGAGGGCAATAATTTTTGGTATCCGGAAAAGCAGCCTGTTGCGACCACCAAACCTTCTTTTCCCTGGGGAAC ]
[+] EMBL BM596293 [ cCGGAAGAAACACAGTTTTCGAGCTTTTAGTACCACAATGTGCGGGTTACGCGCCGTATCACTAATCAGTGTGATTTTCTTCACTTGTGGTAGTGTTGCAGCTGTTGAGGGCAATAATTTTTGGTATCCGGAAGAGCAGCCTGTTGCGACCACCAAACCTTC TTTCCCT GGGAACGGATACTACAACTATGGAAGTCAGCCAGCCAACGAAGGTCACATAACCTACACAAGAGACACAAACTTCGGAGGCCAGTCAGCCAACGGAAATTTGCCAGCCAACGGAGGTCCAACCTACAGAAGTGAGACAAATTTCGGAGGTCAGTCCTCCAACGGTGGTCTGCTAGCTAACGGTGGTCTGCTAGCCAACGGAGGTCTTCCAGCCAACGGAGGTGTTCCAGCCAACGGAGGACTGCCAGCCAACAGAGGGCAGCTGCCGTACGGAACTTCAACCCATATAGGTCAGACAATCTACAGAAGTCAGCCAAATTACGGAGGTCAGCAACGCTACAACGTAAAACCACGACAGCCCGAATACAAATGCATTGACAGCAATCTGCAGTACGACTGTGTGTTCTACGATGTGCACATTGACATGCAAACGC ]
[+] EMBL BM649444 [ ccGAAGAAACACAGTTTTCGAGCTTTTAGTACCACAATGTGCGGGTTACGCGCCGTATCACTAATCAGTGTGATTTTCTTCACTTGTGGTAGTGTTGCAGCTGTTGAGGGCAATAATTTTTGGTATCCGGAAGAGCAGCCTGTTGCGACCACCAAACCTTC TTTCCCT GGGAACGGATACTACAACTATGGAAGTCAGCCAGCCAACGAAGGTCACATAACCTACACAAGAGACACAAACTTCGGAGGCCAGTCAGCCAACGGAAATTTGCCAGCCAACGGAGGTCCAACCTACAGAAGTGAGACAAATTTCGGAGGTCAGTCCTCCAACGGTGGTCTGCTAGCTAACGGTGGTCTGCTAGCCAACGGAGGTCTTCCAGCCAACGGAGGTGTTCCAGCCAACGGAGGACTGCCAGCCAACAGAGGGCAGCTGCCGTACGGAACTTCAACCCATATAGGTCAGACAATCTACAGAAGTCAGCCAAATTACGGAGGTCAGCAACGCTACAACGTAAAACCACGACAGCCCGAATACAAATGCATTGACAGCAATCTGCAGTACGACTGTGTGTTCTACGATGTGCACATTGACATGCAAACGCAAGACGTATACTTTGGCTTTGAGGATATAACACTAAACAACCAGAAGATTGTTACCTTCAAAAACTC ]
[+] EMBL BM619601 [ ccGAAGAAACACAGTTTTCGAGCTTTTAGTACCACAATGTGCGGGTTACGCGCCGTATCACTAATCAGTGTGATTTTCTTCACTTGTGGTAGTGTTGCAGCTGTTGAGGGCAATAATTTTTGGTATCCGGAAGAGCAGCCTGTTGCGACCACCAAACCTTC TTTCCCT GGGAACGGATACTACAACTATGGAAGTCAGCCAGCCAACGAAGGTCACATAACCTACACAAGAGACACAAACTTCGGAGGCCAGTCAGCCAACGGAAATTTGCCAGCCAACGGAGGTCCAACCTACAGAAGTGAGACAAATTTCGGAGGTCAGTCCTCCAACGGTGGTCTGCTAGCTAACGGTGGTCTGCTAGCCAACGGAGGTCTTCCAGCCAACGGAGGTGTTCCAGCCAACGGAGGACTGCCAGCCAACAGAGGGCAGCTGCCGTACGGAACTTCAACCCATATAGGTCAGACAATCTACAGAAGTCAGCCAAATTACGGAGGTCAGCAACGCTACAACGTAAAACCACGACAGCCCGAA ]
[+] EMBL BM597797 [ ccgGAAACACAGTTTTCGAGCTTTTAGTACCACAATGTGCGGGTTACGCGCCGTATCACTAATCAGTGTGATTTTCTTCACTTGTGGTAGTGTTGCAGCTGTTGAGGGCAATAATTTTTGGTATCCGGAAGAGCAGCCTGTTGCGACCACCAAACCTTC TTTCCCT GGGAACGGATACTACAACTATGGAAGTCAGCCAGCCAACGAAGGTCACATAACCTACACAAGAGACACAAACTTCGGAGGCCAGTCAGCCAACGGAAATTTGCCAGCCAACGGAGGTCCAACCTACAGAAGTGAGACAAATTTCGGAGGTCAGTCCTCCAACGGTGGTCTGCTAGCTAACGGTGGTCTGCTAGCCAACGGAGGTCTTCCAGCCAACGGAGGTGTTCCAGCCAACGGAGGACTGCCAGCCAACAGAGGGCAGCTGCCGTACGGAACTTCAACCCATATAGGTCAGACAATCTACAGAAGTCAGCCAAATTACGGAGGTCAGCAACGCTACAACGTAAAACCACGACAGCCCGAATACGAATGCATTGACAGCAATCTGCAGTACGACTGTGTGTTCTACGATGTGCACATTGACATGCAAACGCAAGACGTATACTTTGGCTTTGAGGATATAACACTAAACAACCAGAAGATTGTTACCTTCAAAAACTCTACCATGCGCAAACTGCCCGC]
consensusID : consensus_10342#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 768 fasta sequence
[CCGCCCACCCGTCGCGG-AAGAAACACAGTTTTCGAGCATTGAGTACCACAATGTGCTGGTTACACGCCGTATCACTAATCAGTGTGATTTTCTTCACATGTGGTAGTGTTGCAGCTGTTGGGGGCAATAATTATTGGTATACGGAAGAGCAGCCTGTTGCGACCACCAAACCTTCTTTCCATGTGAACGGATACAACATCTACGGAAGTCAGCCAGCCAACGGTGGTCTGCCAGCCAACGGAGGTCCAACGTACAGAAGTGAGACAAACTTTGGAGGTCAGCCAGCCAACGGTGGTCTGCCAGCCAACGGTGGTCTGCCAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTGCTAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTTCCAGCCAAGAGAGGGCAGCTGCCGTACGGAACTCCAACCCATATAGGTCAAACAATCTACAGAAGTCAGCCAAATTACGGAGGTCAGCAACGCTACAACGCAAGACCACGACAGCTAGAATACAAATGCA-TTGA-GGGTAATCTGCAGTACGACTGTGTGTTCTACGATGTGCACATT--GACATGCAAACGCAAG-ACGTATACTTT--GGCTTTGAGGATA-TAACACTAAA-CAA-CCAG-AAGATT-GTTA-CC-TTC--AAAAAC-TCT-ACCAT--GCG-CAAACT--GCCCGCTG---CTTTACT-CG-CCTCCTT--CCGCCA--GGTT--G-AGGTGCT-CAA-TC-TG-AAC--GGCCTGCCAGAAATAAAAGCCAGAATTCCGATTACCGAAACCCGCGGTTTTCCCC]
[+] EMBL BM656401 [CCGCCCACGCGTC CGGAAAGAAACACAGTTTTCGAGCATTGAGTACCACAATGTGCTGGTTACACGCCGTATCACTAATCAGTGTGATTTTCTTCACATGTGGTAGTGTTGCAGCTGTTGGGGGCAATAATTATTGGTATACGGAAGAGCAGCCTGTTGCGACCACCAAACCTTCTTTCCATGTGAACGGATACAACATCTACGGAAGTCAGCCAGCCAACGGTGGTCTGCCAGCCAACGGAGGTCCAACGTACAGAAGTGAGACAAACTTTGGAGGTCAGCCAGCCAACGGTGGTCTGCCAGCCAACGGTGGTCTGCCAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTGCTAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTTCCAGCCAAGAGAGGGCAGCTGCCGTACGGAACTCCAACCCATATAGGTCAAACAATCTACAGAAGTCAGCCAAATTACGGAGGTCAGCAACGCTACAACGCAAGACCACGACAGCTAGAATACAAATGCA TTGA GGGTAATCTGCAGTACGACTGTGTGTTCTACGATGTGCACATT GACATGCAAACGCAAG ACGTATACTTT GGCTTTGAGGATA TAACACTAAA CAA CCAG AAGATT GTTA CC TTC AAAAAC TCT ACCAT GCG CAAACT GCCCGCTG CTTTACT CG CCTCCTT CCGCCA GG ]
[+] EMBL BM657849 [ CCGGTCGCGG AAGAAACACAGTTTTCGAGCTTTGAGTACCACAATGTCCTGGTTACGCGCCGTATCACTAATCAGTGTGATTTTCTTCACATGTGGTAGTGTTGCAGCTGTTGGGGGCAATAATTATTGGTATACGGAAGAGCAGCCTGTTGCGACCACCAAACCTTCTTTCCATGTGAACGGATACAACATCTACGGAAGTCAGCCAGCCAACGGTGGTCTGCCAGCCAACGGAGGTCCAACGTACAGAAGTGAGACAAACTTTGGAGGTCAGCCAGCCAACGGTGGTCTGCCAGCCAACGGTGGTCTGCCAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTGCTAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTGCCAGCCAACAGAGGGCAGCTGCCGTACGGAACTCCAACCCATATAGGTCAGACAATCTACAGAAGTCAGCCAAATTACGGAGGTCAGCAACGCTACAACGCAAGACCACGACAGCTAGAATACAAATGCATTTGAGGGGTAATCTGCAGTACGACTGTGTGTTCTACGATGTGCACATTTGGACATGCAAACGCAAGAACGTATACTTTTGGGTTTTGAGGATATTAACACTAAACCAACCCAGAAAAATTGGTTACCC TTCCAAAAAACTTCTAACCATTGGCGCCAAACTTGGCCCGCTGTGTTTTTATTCCGCCCTCCTTTCCCCCCAAGGGTTTGGAAGGGGCTCCAATTCTTGAAACTTGCCCTGCCAGAAATAAAAGCCAGAATTCCGATTACCGAAACCCGCGGTTTTCCCC]
[+] EMBL BM615628 [ CCGGTCGCGG AAGAAACACAGTTTTCGAGCTTTGAGTACCACAATGTGCTGGTTACGCGCCGTATCACTAATCAGTGTGATTTTCTTCACATGTGGTAGTGTTGCAGCTGTTGGGGGCAATAATTATTGGTATACGGAAGAGCAGCCTGTTGCGACCACCAAACCTTCTTTCCATGTGAACGGATACAACATCTACGGAAGTCAGCCAGCCAACGGTGGTCTGCCAGCCAACGGAGGTCCAACGTACAGAAGTGAGACAAACTTTGGAGGTCAGCCAGCCAACGGTGGTCTGCCAGCCAACGGTGGTCTGCCAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTGCTAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTGCCAGCCAACAGAGGGCAGCTGCCGTACGGAACTCCAACCCATATAGGTCAGACAATCTACAGAAGTCAGCCAAATTACGGAGGTCAGCAACGCTACAACGCAAGACCACGACAGCTAGAATACAAATGCA TTGA GGGTAATCTGCAGTACGACTGTGTGTTCTACGATGTGCACATT GACATGCAAACGCAAG ACGTATACTTT GGCTTTGAGGATA TAACACTAAA CAA CCAG AAGATT GTTA CC TTC AAAAAC TCT ACCAT GCG CAAACT GCCCGCTG CTTTACT CG CCTCCTT CCGCCA GGTT G AGGTGCT CAA TC TG AAC GGCCTGC ]
[+] EMBL BM580047 [ CCG CGAGA AAGAAACACAGTTTTCGAGCATTGAGTACCACAATGTGCTGGTTACACGCCGTATCACTAATCAGTGTGATTTTCTTCACATGTGGTAGTGTTGCAGCTGTTGGGGGCAATAATTATTGGTATACGGAAGAGCAGCCTGTTGCGACCACCAAACCTTCTTTCCATGTGAACGGATACAACATCTACGGAAGTCAGCCAGCCAACGGTGGTCTGCCAGCCAACGGAGGTCCAACGTACAGAAGTGAGACAAACTTTGGAGGTCAGCCAGCCAACGGTGGTCTGCCAGCCAACGGTGGTCTGCCAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTGCTAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTTCCAGCCAAGAGAGGGCAGCTGCCGTACGGAACTCCAACCCATATAGGTCAAACAATCTACAGAAGTCAGCCAAATTACGGAGGTCAGCAACGCTACAACGCAAGACCACGACAGCTAGAATACAAATGCA TTGA GGGTAATCTGCAGTACGACTGTGTGTTCTACGATGTGCACATT GACATGCAAACGCAAG ACGTATACTTT GGCTTTGAGGATA TAACACTAAA CAA CCAG AAGATT GGTA CCTTTC AAAAAC TC ]
[+] EMBL BM617537 [ CCG CGAGA AAGAAACACAGTTTTCGAGCATTGAGTACCACAATGTGCTGGTTACACGCCGTATCACTAATCAGTGTGATTTTCTTCACATGTGGTAGTGTTGCAGCTGTTGGGGGCAATAATTATTGGTATACGGAAGAGCAGCCTGTTGCGACCACCAAACCTTCTTTCCATGTGAACGGATACAACATCTACGGAAGTCAGCCAGCCAACGGTGGTCTGCCAGCCAACGGAGGTCCAACGTACAGAAGTGAGACAAACTTTGGAGGTCAGCCAGCCAACGGTGGTCTGCCAGCCAACGGTGGTCTGCCAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTGCTAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTTCCAGCCAAGAGAGGGCAGCTGCCGTACGGAACTCCAACCCATATAGGTCAAACAATCTACAGAAGTCAGCCAAATTACGGAGGTCAGCAACGCTACAACGC ]
[+] EMBL BM614599 [ cCGCGG AAGAAACACAGTTTTCGAGCTTTGAGTACCACAATGTGCTGGTTACGCGCCGTATCACTAATCAGTGTGATTTTCTTCACATGTGGTAGTGTTGCAGCTGTTGGGGGCAATAATTATTGGTATACGGAAGAGCAGCCTGTTGCGACCACCAAACCTTCTTTCCATGTGAACGGATACAACATCTACGGAAGTCAGCCAGCCAACGGTGGTCTGCCAGCCAACGGAGGTCCAACGTACAGAAGTGAGACAAACTTTGGAGGTCAGCCAGCCAACGGTGGTCTGCCAGCCAACGGTGGTCTGCCAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTGCTAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTGCCAGCCAACAGAGGGCAGCTGCCGTACGGAACTCCAACCCATATAGGTCAGACAATCTACAGAAGTCAGCCAAATTACGGAGGTCAGCAACGCTACAACGCAAGACCACGACAGCTAGAATACAAATGCA TTGA GGGTAATCTGCAGTACGACTGTGTGTTCTACGATGTGCACATT GACATGCAAACGCAAG ACGTATACTTT GGCTTTGAGGATA TAACACTAAA CAA CCAG AAGATT GTTA CC TTC AAAAAC TCT ACCAT GCG CAAACT GCCCGCTG CTTTACT CG C ]
[+] EMBL BX607177 [ AAACACAGTTTTCGAGCATTGAGTACCACAATGTGCTGGTTACACGCCGTATCACTAATCAGTGTGATTTTCTTCACATGTGGTAGTGTTGCAGCTGTTGGGGGCAATAATTATTGGTATACGGAAGAGCAGCCTGTTGCGACCACCAAACCTTCTTTCCATGTGAACGGATACAACATCTACGGAAGTCAGCCAGCCAACGGTGGTCTGCCAGCCAACGGAGGTCCAACGTACAGAAGTGAGACAAACTTTGGAGGTCAGCCAGCCAACGGTGGTCTGCCAGCCAACGGTGGTCTGCCAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTGCTAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTTCCAGCCAAGAGAGGGCAGCTGCCGTACGGAACTCCAACCCATATAGGTCAAACAATCTACAGAAGTCAGCCAAATTACGGAGGTCAGCAACGCTACAACGCAAGACCACGACAGCTAGAATACAAATGCA TTGA GGGTAATCTGCAGTACGACTGTGTGTTCTACGATGTGCACATT GACATGCAAACGCAAG ACGTATACTTT GGCTTTGAGGATA TAACACTAAA CAA CCAG AAGATT GTTA CC TTC AAAAAC TCT ACCAT GCG CAAACT GCCCGCTG CTTTACT CG CCTCCTT CCGCCA GGTT G AGGTGCT CAA TC TG AAC GGCCTGCag ]
[+] EMBL BM622851 [ ccgAGTTTTCGAGCTTTGAGTACCACAATGTGCTGGTTACGCGCCGTATCACTAATCAGTGTGATTTTCTTCACATGTGGTAGTGTTGCAGCTGTTGGGGGCAATAATTATTGGTATACGGAAGAGCAGCCTGTTGCGACCACCAAACCTTCTTTCCATGTGAACGGATACAACATCTACGGAAGTCAGCCAGCCAACGGTGGTCTGCCAGCCAACGGAGGTCCAACGTACAGAAGTGAGACAAACTTTGGAGGTCAGCCAGCCAACGGTGGTCTGCCAGCCAACGGTGGTCTGCCAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTGCTAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTGCCAGCCAACAGAGGGCAGCTGCCGTACGGAACTCCAACCCATATAGGTCAGACAATCTACAGAAGTCAGCCAAATTACGGAGGTCAGCAACGCTACAACGCAAGACCACGACAGCTAGAATACAAATGCA TTGA GGGTAATCTGCAGTACGACTGTGTGTTCTACGATGTGCACATT GACATGCAAACGCAAG ACGTATACTTT GGCTTTGAGGATA TAACACTAAA CAA CCAG AAGATT GTTA CCTTTC AAAAAC TCT ACCAT GCG CAAACT GCCCGCTG CTTTAC ]
[+] EMBL BM645773 [ tCCTGTTGCGACCACCGAACCTTCTTTCCATGCGAACGGATACGACATCTACGGAAGTCACCCAGCCAACGGTGGTCTGCCAGCCGACGGAGGTCCAACGTACAGAAGTGAGACAAACTTTGGAGGTCAGCCAGCCAACGGTGGTCTGCCAGCCAACGGTGGTCTGCCAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTGCTAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTTCCAGCCAAGAGAGGG ]
[+] EMBL AGA282397 [ AAACCTTCTTTCCATGTGAACGGATACAACATCTACGGAAGTCAGCCAGCCAACGGTGGTCTGCCAGCCAACGGAGGTCCAACGTACAGAAGTGAGACAAACTTTGGAGGTCAGCCAGCCAACGGTGGTCTGCCAGCCAACGGTGGTCTGCCAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTGCTAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTTCCAGCCAAGAGAGGGCAGCTGCCGTACGGAACTCCAACCCATATAGGTCAAACAATCTACAGAAGTCAGCCAAATTACGGAGGTCAGCAACGCTACAACGCAAGACCACGACAGCTAGAATACAAATGCA TTGA GGGTAATCTGCAGTACGACTGTGTGTTCTACGATGTGCACATT GACATGCAAACGCAAG ACGTATACTTT GGCTTTGAGGATA TAACACT ]
consensusID : consensus_10342#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 532 fasta sequence
[CAATAATTATTGGTATACGGAAGAGCAGCCTGTTGCGACCACCAAACCTTCTTTCCCTGGGAACGGATACTACAACTATGGAAGTCAGCCAGCCAACGAAGGTCACATAACCTACCCAAGAGACACAAACTTCGGAGGCCGGTCAGCCAACGGAAATTTGCCAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTGCTAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTGCCAGCCAACAGAGGGCAACTGCCGTACGGAACTCCAACCCATATAGGTCAGACAATCTACAGAAGTCAGCCAAATTACGGAGGTCAGCAACGCTACAACGTAAAACCACGACAGCCCGAATACAAATGCATTGACAGCAATCTGCAGTACGACTGTGTGTTCTACGATGTGCACATTGACATGCAAACGCAAGACGTATACTTTGGCTTTGAGGATATAACACTAAACAACCAGAAGATTGTTACCTCCAAAAACTCTACCATGCGCAAACTGCCCGCTGCTTTACTCGACTCCTTCCGC]
[-] EMBL AF283271 [CAATAATTATTGGTATACGGAAGAGCAGCCTGTTGCGACCACCAAACCTTCTTTCCCTGGGAACGGATACTACAACTATGGAAGTCAGCCAGCCAACGAAGGTCACATAACCTACCCAAGAGACACAAACTTCGGAGGCCGGTCAGCCAACGGAAATTTGCCAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTGCTAGCCAACGGAGGTCTGCCAGCCAACGGAGGTCTGCCAGCCAACAGAGGGCAACTGCCGTACGGAACTCCAACCCATATAGGTCAGACAATCTACAGAAGTCAGCCAAATTACGGAGGTCAGCAACGCTACAACGTAAAACCACGACAGCCCGAATACAAATGCATTGACAGCAATCTGCAGTACGACTGTGTGTTCTACGATGTGCACATTGACATGCAAACGCAAGACGTATACTTTGGCTTTGAGGATATAACACTAAACAACCAGAAGATTGTTACCTCCAAAAACTCTACCATGCGCAAACTGCCCGCTGCTTTACTCGACTCCTTCCGC]
consensusID : consensus_10342#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 471 fasta sequence
[CAAGAATCCCCCGAGGTTAACATCTGCTGCACGTGGAACGTAACCAGCCGCAGTTTGATAGGGTGGAGTACCTTTACCTTGACCACAACTCCATCGTGACGCTTAAGCTTAGCACCAGTCATACGCTAAAGAATCTTACACTATCGCATAATGACTGGGATTGTAACAGTTTACGTGCACTTTTCAGAAACGTAGCCCATCCTGCAGTACACGATGCTGACCAGCACTGCAAGATCGACTACCAACTCGAGCAGGGTCTCTGCTGCAAAGAAAGTGACAAGCCGTATCTGGACCGGCTATTACAGTACATTGCCCTGACGAGCGTGGTGGAGAAGTTGCAGCGTGCACAAGGACGCTGCCAGTGCCACAGATACCATCAACAGCGTGCAAACGTCTGTCCCACTACATCACACAGCAGGNTGATGTGCCACTGCANCGGTAACGAACAGCTCGAGGCCGAAGNTCAACGAC]
[+] EMBL AL929945 [CAAGAATCCCCCGAGGTTAACATCTGCTGCACGTGGAACGTAACCAGCCGCAGTTTGATAGGGTGGAGTACCTTTACCTTGACCACAACTCCATCGTGACGCTTAAGCTTAGCACCAGTCATACGCTAAAGAATCTTACACTATCGCATAATGACTGGGATTGTAACAGTTTACGTGCACTTTTCAGAAACGTAGCCCATCCTGCAGTACACGATGCTGACCAGCACTGCAAGATCGACTACCAACTCGAGCAGGGTCTCTGCTGCAAAGAAAGTGACAAGCCGTATCTGGACCGGCTATTACAGTACATTGCCCTGACGAGCGTGGTGGAGAAGTTGCAGCGTGCACAAGGACGCTGCCAGTGCCACAGATACCATCAACAGCGTGCAAACGTCTGTCCCACTACATCACACAGCAGGNTGATGTGCCACTGCANCGGTAACGAACAGCTCGAGGCCGAAGNTCAACGAC]
[+] EMBL BX602918 [ TACCTTTACCTTGACCACAACTCCATCGTGACGCTTAAGCTTAGCACCAGTCATACGCTAAAGAATCTTACACTATCGCATAATGACTGGGATTGTAACAGTTTACGTGCACTTTTCAGAAACGTAGCCCATCCTGCAGTACACGATGCTGACCAGCACTGCAAGATCGACTACCAACTCGAGCAGGGTCTCTGCTGCAGAGAAAGTGACAAGCCGTATCTGGACCGGCTATTACAGTACATTGCCCTGACGAGCGTGGTGG ]
[+] EMBL BX610186 [ CGAGCAGGGTCTCTGCTGCAAAGAAAGTGGAAAGCCGTATCTGGACCGGCTATTACAGTACATTGCCCTGACGAGCGTGGTGGAGAAGTTGCAGCGGGCACAAGGACGCT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10342#1 ------------------------------------------------------------
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ------------------------------------------------------------
consensus_10342#0 CCGCCCACGCGTCCGCAGTTCTCCTGTTTCGAGTGCTATAATGTGCTGGTTACGCGCCGT 60
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 ------------------------------------------------------------
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ------------------------------------------------------------
consensus_10342#0 ATCACAAATAAGTGTAATTTTTTTAGCCTGTACCAACGGAGGACAGCCATCCTACAGGAG 120
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 ------------------------------------------------------------
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ------------------------------------------------------------
consensus_10342#0 TCAGCCAATTTACGGAAATAAACAACGCTACTACGGAAATCAGCAATACTACTACGTAAA 180
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 ------------------------------------------------------------
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ------------------------------------------------------------
consensus_10342#0 ACCACTACAACCCGAATACAAATGCATTGAGAAAAATCTGCAGTACGACTGCGTGTTCTA 240
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 ------------------------------------------------------------
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ------------------------------------------------------------
consensus_10342#0 CAATGTGCACATTGACATGCAATCGCAAGACGTATACTTTGGCTTTGATGATATAACACT 300
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 ------------------------------------------------------------
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ------------------------------------------------------------
consensus_10342#0 AAACAACCAGAAGAATGTTACCTTCAAAAACTCTACCATGCGCAAACTGCCCGCTGCTTC 360
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 ------------------------------------------------------------
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ------------------------------------------------------------
consensus_10342#0 ACTCGCCTCCTTCCGCCAGGTTGAGGTGCTCAATCTGAACGGCCTGCAGATAGAGGAGAT 420
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 ------------------------------------------------------------
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ------------------------------------------------------------
consensus_10342#0 CGATACGAACGCGTTCGCTTACGCGCACACTATTCAGAAGCTGTACATGGGATTCAATGC 480
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 ---------------------------------------------------CCGCCAGCC 9
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ------------------------------------------------------------
consensus_10342#0 GATTCGATATTTGCCACCACACGTGTTTCAGAACGTCCCATCGCTCACGGTGCTTGTGCT 540
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 TCTGCCGATCGCACATTATCAGCATTGCGCGAGTGGAAGACCTCTCGCACATCTATACAC 69
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ------------------------------------------------------------
consensus_10342#0 GGAACGGAACGATTTAACCAGCCTGCCACGCGGAATCTTCCACAACACACCCAAGCTCAC 600
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 ACGCACTCTCTCCCTCTCTCTCTATTTATCTCTCTCACACATTCTCGGTGGTATTTGCTG 129
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ------------------------------------------------------------
consensus_10342#0 CATGCTGTCGATGTCAAACAACAACCTGGAGCGCATCGAAGACGAAACTTTCCAAGCGAC 660
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 AGAACAGTTCGTGCTAATACAAGTAGGTTTGTCTCCCTTTTACCCCATCACTACACTTTT 189
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ------------------------------------------------------------
consensus_10342#0 TACAGCGCTTCAAAATCTGCAACTGTCCAGCAACAGGCTTACGCATGTTGACCTTTCTCT 720
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 CGGAATCTCAACAGTAAGAGATGTCTCCAAACACCTGTCCCAACCAATGATGTTGGATCG 249
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ------------------------------------------------------------
consensus_10342#0 CATTCCCAGTCTCTTCCACGTCAACGTCAGTTACAACCTGCTCTCTACGCTTGCCATACC 780
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 GTCCCAGCTTGTACTGTCGACATTTGCCCTCGAAAATCACCCCAGACTGTAACGCCGTTA 309
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ------------------------------------------------------------
consensus_10342#0 GATCGCGGTCGAAGAGCTAGACGCATCGCACAATAGCATCAACGCCGTACGCGGGCCCGT 840
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 TCACTGGGAATTCCCGTAACGAATTCATCTTTCAGTGTGCTACGCTAGTTCTACCGCTGG 369
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ------------------------------------------------------------
consensus_10342#0 CAACGTGGAGTTGACCATTCTGAAGCTGCAACACAACAACTTGACTGACACTGCCTGGCT 900
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 AATGATTGCTCAGTTTCAATCCATCAGTCGCGGAAGAAACACAGTTTTCGAGCTTTTAGT 429
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ----------------CCGCCCACCCGTCGCGGAAGAAACACAGTTTTCGAGCATTGAGT 44
consensus_10342#0 GCTGAACTATCCCGGACTGGTTGACGTGGATCTTTCCTACAACCAGTTGGAGAAGATAAC 960
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 ACCACAATGTGCGGGTTACGCGCCGTATCACTAATCAGTGTGATTTTCTTCACTTGTGGT 489
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ACCACAATGTGCTGGTTACACGCCGTATCACTAATCAGTGTGATTTTCTTCACATGTGGT 104
consensus_10342#0 TTACCAACACTTTGTCAAAATGCAGCGCTTGGAGCGACTGTACGTCTCCAACAACCACCT 1020
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 AGTGTTGCAGCTGTTGAGGGCAATAATTTTTGGTATCCGGAAGAGCAGCCTGTTGCGACC 549
consensus_10342#3 --------------------CAATAATTATTGGTATACGGAAGAGCAGCCTGTTGCGACC 40
consensus_10342#2 AGTGTTGCAGCTGTTGGGGGCAATAATTATTGGTATACGGAAGAGCAGCCTGTTGCGACC 164
consensus_10342#0 TGTGGCGCTCAATCTTTACAGTCAACCCATCCCAACGCTCAAAGTGCTCGATCTGTCGCA 1080
consensus_10342#4 ---------------------------------------CAAGAATCCCCCGAGGTT--- 18
** * *
consensus_10342#1 ACCAAACCTTCTTTCCCTGGGAACGGAT--ACTACAACTATGGAAGTCAGCCAGCCAACG 607
consensus_10342#3 ACCAAACCTTCTTTCCCTGGGAACGGAT--ACTACAACTATGGAAGTCAGCCAGCCAACG 98
consensus_10342#2 ACCAAACCTTCTTTCCATGTGAACGGAT--ACAACATCTACGGAAGTCAGCCAGCCAACG 222
consensus_10342#0 CAACCATCTGCTGCACGTGGAACGTAACCAGCCGCAGTTTGATAGGGTGGAGTACCTTTA 1140
consensus_10342#4 --AACATCTGCTGCACGTGGAACGTAACCAGCCGCAGTTTGATAGGGTGGAGTACCTTTA 76
* ** ** * ** * * * ** * * * * **
consensus_10342#1 AAGGTCACATAACCTACACAAGAGACACAAACTTCGGAGGCCAGTCAGCCAACGGAAATT 667
consensus_10342#3 AAGGTCACATAACCTACCCAAGAGACACAAACTTCGGAGGCCGGTCAGCCAACGGAAATT 158
consensus_10342#2 GTGGTCTGCCAGCCAAC---GGAGGTCCAACGTACAGAAGTGAGACAAACTTTGGAGGTC 279
consensus_10342#0 CCTTGACCACAACTCCATCGTGACGCTTAAGCTTAGCA--CCAGTCATACGCTAAAGAAT 1198
consensus_10342#4 CCTTGACCACAACTCCATCGTGACGCTTAAGCTTAGCA--CCAGTCATACGCTAAAGAAT 134
* * ** ** * * * ** * *
consensus_10342#1 TGCCAGCCAACGGAGGTCCAACCTACAGAAGTGAGACAAATTTCGGAGGTCAGTCCTCCA 727
consensus_10342#3 TGCCAGCCAACGGAGGTC------------------------------------------ 176
consensus_10342#2 AGCCAGCCAACGGTGGTCT---------------------------------GCCAGCCA 306
consensus_10342#0 CTTACACTATCGCATAATG----------------------------------------A 1218
consensus_10342#4 CTTACACTATCGCATAATG----------------------------------------A 154
* * **
consensus_10342#1 ACGGTGGTCTGCTAGCTAACGGTGGTCTGCTAGCCAACGGAG---GTCTTCCAGCCAACG 784
consensus_10342#3 ---------TGCCAGCCAACGGAGGTCTGCTAGCCAACGGAG---GTCTGCCAGCCAACG 224
consensus_10342#2 ACGGTGGTCTGCCAGCCAACGGAGGTCTGCCAGCCAACGGAG---GTCTGCTAGCCAACG 363
consensus_10342#0 CTGGGATTGTAACAGTTTACGTGCACTTTTCAGA-AACGTAGCCCATCCTGCAGTACACG 1277
consensus_10342#4 CTGGGATTGTAACAGTTTACGTGCACTTTTCAGA-AACGTAGCCCATCCTGCAGTACACG 213
* ** *** * ** **** ** ** ** ***
consensus_10342#1 GAGGTGTTC--CAGCCAACGGAGGACTGCCAGCCAACAGAGGGCAGCTGCCGTACGGAAC 842
consensus_10342#3 GAGGT--------------------CTGCCAGCCAACAGAGGGCAACTGCCGTACGGAAC 264
consensus_10342#2 GAGGTCTGC--CAGCCAACGGAGGTCTTCCAGCCAAGAGAGGGCAGCTGCCGTACGGAAC 421
consensus_10342#0 ATGCTGACCAGCACTGCAAGATCGACTACCAACTCGAGCAGGGTCTCTGCTGCAAAGAAA 1337
consensus_10342#4 ATGCTGACCAGCACTGCAAGATCGACTACCAACTCGAGCAGGGTCTCTGCTGCAAAGAAA 273
* * ** *** * **** **** * * ***
consensus_10342#1 TT--CAACCCATATA-GGTCAGACAATCTACAGAAGTCAGCCAAATTACGGAGGTCAGCA 899
consensus_10342#3 TC--CAACCCATATA-GGTCAGACAATCTACAGAAGTCAGCCAAATTACGGAGGTCAGCA 321
consensus_10342#2 TC--CAACCCATATA-GGTCAAACAATCTACAGAAGTCAGCCAAATTACGGAGGTCAGCA 478
consensus_10342#0 GTGACAAGCCGTATCTGGACCGGCTAT-TACAGTACATTGCCCTGACGAGCGTGGTGGAG 1396
consensus_10342#4 GTGACAAGCCGTATCTGGACCGGCTAT-TACAGTACATTGCCCTGACGAGCGTGGTGGAG 332
*** ** *** ** * * ** ***** * *** * * *
consensus_10342#1 ACGCTACAACGTAAAACCACGACAGCCCGAATACAA-ATGCATTGACAGCAATCTGCAGT 958
consensus_10342#3 ACGCTACAACGTAAAACCACGACAGCCCGAATACAA-ATGCATTGACAGCAATCTGCAGT 380
consensus_10342#2 ACGCTACAACGCAAGACCACGACAGCTAGAATACAA-ATGCATTGAGGGTAATCTGCAGT 537
consensus_10342#0 AAGTTGCAGCGTGC-ACAAGGACGCTGC-AGTGCCACAGATACCATCAACAGCGTGCAA- 1453
consensus_10342#4 AAGTTGCAGCGTGC-ACAAGGACGCTGCCAGTGCCACAGATACCATCAACAGCGTGCAA- 390
* * * ** ** ** * *** * * * * * * * ****
consensus_10342#1 ACGACTGTGT-GTTCTACGATGT-GCACATTGACATGCAAACGCAA----GACGTATACT 1012
consensus_10342#3 ACGACTGTGT-GTTCTACGATGT-GCACATTGACATGCAAACGCAA----GACGTATACT 434
consensus_10342#2 ACGACTGTGT-GTTCTACGATGT-GCACATTGACATGCAAACGCAA----GACGTATACT 591
consensus_10342#0 A-GTCTGTCCCACTACATCACACAGCAGGGTGATGTGCCACTGCAG-GGTAACGAACAGC 1511
consensus_10342#4 ACGTCTGTCCCACTACATCACACAGCAGGNTGATGTGCCACTGCANCGGTAACGAACAGC 450
* * **** * * * *** *** *** * *** *** * *
consensus_10342#1 TTGGCTTTGAGGATATAACACTAAACAACCAGAAGATTGTTACCTTCAAAAACTCTACCA 1072
consensus_10342#3 TTGGCTTTGAGGATATAACACTAAACAACCAGAAGATTGTTACCTCCAAAAACTCTACCA 494
consensus_10342#2 TTGGCTTTGAGGATATAACACTAAACAACCAGAAGATTGTTACCTTCAAAAACTCTACCA 651
consensus_10342#0 TCGAGGCCGAAGT-CAACGAGCTGAGGGCTGAGGTGCAGCAGCTAACCAACGAGCAGATA 1570
consensus_10342#4 TCGAGGCCGAAGNTCAACGAC--------------------------------------- 471
* * ** * * *
consensus_10342#1 TGCGCAAACTGCCCGC-------------------------------------------- 1088
consensus_10342#3 TGCGCAAACTGCCCGCTGCTTTACTCGACTCCTTCCGC---------------------- 532
consensus_10342#2 TGCGCAAACTGCCCGCTGCTTTACTCGCCTCCTTCCGCCAGGTTGAGGTGCTCAATCTGA 711
consensus_10342#0 CAACAGGAGCAGCTGCTGCAGGGGCTACACGCCGAGATCGATACCAATCTGCGACGGTAC 1630
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 ------------------------------------------------------------
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ACGGCCTGCCAGAAATAAAAGCCAGAATTCCGATTACCGAAACCCGCGGTTTTCCCC--- 768
consensus_10342#0 CGCCTGCCGAAGGATGGACTAGCGCGCTCGAGCGATAATCTAAATAAAGTGTTCACCCAT 1690
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 ------------------------------------------------------------
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ------------------------------------------------------------
consensus_10342#0 CTGAAAGAGCGGCACGCGTTTAAGTTGCGCGAAACGCAGGCACGCCGCACGGAGGCGAAT 1750
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 ------------------------------------------------------------
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ------------------------------------------------------------
consensus_10342#0 GCTAAGCAGAAGGAAACGGAGGACCTGGAACAGGAAAACATTGCGCTCGAGAAGCAGTTG 1810
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 ------------------------------------------------------------
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ------------------------------------------------------------
consensus_10342#0 GATAATAAGAAGGCAAAGCAGGCTGAGTTGAGACAGGAGACGTCGCTGAAGCGCCAAAAA 1870
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 ------------------------------------------------------------
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ------------------------------------------------------------
consensus_10342#0 GTGAAGCAATTAGAGGCCAAGAAGAACCGCAATCCAGATACGCGTCGCGTTACAAAGTAG 1930
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 ------------------------------------------------------------
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ------------------------------------------------------------
consensus_10342#0 TAGGCAAAGCACCTGTGTGTGTATGATTTTACTTGATCTAAGCATGTAACGGAAATATTT 1990
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 ------------------------------------------------------------
consensus_10342#3 ------------------------------------------------------------
consensus_10342#2 ------------------------------------------------------------
consensus_10342#0 CGAATGCCATTTTTACAAAATAAAAAGACATAACTTTTTCAGTTGCAAAAAAAAAAAAAA 2050
consensus_10342#4 ------------------------------------------------------------
consensus_10342#1 --------------------------------
consensus_10342#3 --------------------------------
consensus_10342#2 --------------------------------
consensus_10342#0 AAAAAAAAAAAAAGGCCACATGTCCCCGGGCG 2082
consensus_10342#4 --------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||