These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1627#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 663 fasta sequence [CCGCGAGCAGTGACGAGCTGGAAGACGGCTCACAGGAAAACACCGAAAGCGGTGACGAGTCTGGGACGAACAATTTGGTGGATGAAAGCACCGACAGTGTAGAAAACACTCCGCCCGCTCGTACAAGGCGGCTGTCCTCGCGGTCGGCCAGAAGCGCACAAACGAGCGACGCAACCCGCTCACGGAGGAAGGCAGACCACCACTATCAGCATTGCGATGCGTGCGGGAAGATGGTTTCGGATCTGAAAAGTCACATGCTCAGCCACACGAAGGAGAAACGGTTCTCCTGCCCGTACTGTGCCGTGACGATGACGTTCAAGTCGAATCTAAACATCCATATCAAGACGGTCCATTTGAAGGAGATTTCGAAATCGTGCGAGCTGTGCGGGCAAGGATTCGTCAATTACAATTCCTACAAGAACCATATGGCCTCGCAGCACGGAACGGGTGAGTACAGCTGTGAAACGTGTGCGAAAAGGTTTACGCATCTGCGAACGTACAACATGCACGTGCGCCGGCACCATAAAGCCGATGCGACGTACAAGAAAAAGAAGCAACTTTGTGGCACGTGCGGCGCCATGGTTACGCACATAGCGACGCACATGCTCACCCATACGCAGGAGAAGCGGTACGCCTGTCCGCACTGTCCGATCGAAATGGTGG] [+] EMBL BM583838 [CCGCGAGCAGTGACGAGCTGGAAGACGGCTCACAGGAAAACACCGAAAGCGGTGACGAGTCTGGGACGAACAATTTGGTGGATGAAAGCACCGACAGTGTAGAAAACACTCCGCCCGCTCGTACAAGGCGGCTGTCCTCGCGGTCGGCCAGAAGCGCACAAACGAGCGACGCAACCCGCTCACGGAGGAAGGCAGACCACCACTATCAGCATTGCGATGCGTGCGGGAAGATGGTTTCGGATCTGAAAAGTCACATGCTCAGCCACACGAAGGAGAAACGGTTCTCCTGCCCGTACTGTGCCGTGACGATGACGTTCAAGTCGAATCTAAACATCCATATCAAGACGGTCCATTTGAAGGAGATTTCGAAATCGTGCGAGCTGTGCGGGCAAGGATTCGTCAATTACAATTCCTACAAGAACCATATGGCCTCGCAGCACGGAACGGGTGAGTACAGCTGTGAAACGTGTGCGAAAAGGTTTACGCATCTGCGAACGTACAACATGCACGTGCGCCGGCACCATAAAGCCGATGCGACGTACAAGAAAAAGAAGCAACTTTGTGGCACGTGCGGCGCCATGGTTACGCACATAGCGACGCACATGCTCACCCATACGCAGGAGAAGCGGTACGCCTGTCCGCACTGTCCGATCGAAATGGTGG] consensusID : consensus_1627#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 624 fasta sequence [CCGAGGTTTAAGTGCCATGGTTACTGCACATAGCGACGCACTATGCTCACCCATACGCAGGAGAAGCGGTACGCCTGTCCGCACTGTCCGATCGAAATGGTGGACCGTGGGGAATCTTGATGCGCCATGTCCGGTCGGTCCATCTGCAGGATGTGAGGTGAAGTCGTGCGAAACGTGCGGCACTACGGTCTTCAAGTATCCCAGCTCGCACAGATCTCACATGCTCCGAGGTGCACGGCATTGGGAAAACGTTCGACTGCACATGTGTGCCANAAAGTTCAAACCACAACAGTTGGGCTTAAATCGCACATTGCCCGTGTGCACAGCAATGAGCGAAAGTTNGAGTGCGAAACGTGTGGCATGCTGTTTAAAGTGAAAGTCGGCCTTACGAAGCATCAGCTAGTGCACTCGACGGAGCAACCGTACGCGTGCAATCAATGTCCTGAAACGGTTTAAAACGTCTGCCATGGACGCAATTCACACCAACTGACCCACAGTGGCATAGTGTTTCCGATGTCCGNACTGTGAAAAATCGATACCGGTACAAAGATGTGCTTGCGCATTCACATTCGCGCGAGAAGCATCCCGNAGCNACAGGAGGAGCAAGATCGATAGCGCTGTGNC] [+] EMBL AL693108 [CCGAGGTTTAAGTGCCATGGTTACTGCACATAGCGACGCACTATGCTCACCCATACGCAGGAGAAGCGGTACGCCTGTCCGCACTGTCCGATCGAAATGGTGGACCGTGGGGAATCTTGATGCGCCATGTCCGGTCGGTCCATCTGCAGGATGTGAGGTGAAGTCGTGCGAAACGTGCGGCACTACGGTCTTCAAGTATCCCAGCTCGCACAGATCTCACATGCTCCGAGGTGCACGGCATTGGGAAAACGTTCGACTGCACATGTGTGCCANAAAGTTCAAACCACAACAGTTGGGCTTAAATCGCACATTGCCCGTGTGCACAGCAATGAGCGAAAGTTNGAGTGCGAAACGTGTGGCATGCTGTTTAAAGTGAAAGTCGGCCTTACGAAGCATCAGCTAGTGCACTCGACGGAGCAACCGTACGCGTGCAATCAATGTCCTGAAACGGTTTAAAACGTCTGCCATGGACGCAATTCACACCAACTGACCCACAGTGGCATAGTGTTTCCGATGTCCGNACTGTGAAAAATCGATACCGGTACAAAGATGTGCTTGCGCATTCACATTCGCGCGAGAAGCATCCCGNAGCNACAGGAGGAGCAAGATCGATAGCGCTGTGNC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1627#0 CCGCGAGCAGTGACGAGCTGGAAGACGGCTCACAGGAAAACACCGAAAGCGGTGACGAGT 60 consensus_1627#1 -----------------CCGAGGTTTAAGTGCCATGGT--TACTGCACATAGCGACGCA- 40 * * * ** * ** * * * **** consensus_1627#0 CTGGGACGAACAATTTGGTGGATGAAAGCACCGACAGTGTAGAAAACACTCCGCCCGCTC 120 consensus_1627#1 CTATGCTCACCCATACGCAGGAGAAGCGGTACGCCTGTC-------CGCACTGTCCGATC 93 ** * * * ** * *** * * ** * ** * * * * *** ** consensus_1627#0 GTACAAGGCGGCTGTCCTCGCGGTCGGCCAGAAGCGC-ACAAACGAGCGACGCAAC--CC 177 consensus_1627#1 G----AAATGGTGGACCGTGGGGA-ATCTTGATGCGCCATGTCCGGTCGGTCCATCTGCA 148 * * ** * ** * ** * ** **** * ** ** ** * * consensus_1627#0 GCTCACGGAGGAAGGCAGACCACCACTATCAGCATTGCGATGCGTGCGGGAAGATGGTTT 237 consensus_1627#1 GGATGTGAGGTGAAGTCGTGCGAAACGTGCGGCACTACGGTC--TTCAAGTATCCCAGCT 206 * * * * * * * ** * *** * ** * * * * * * consensus_1627#0 CGGATCTGAAAAGTCACATGCTC--AGCCACACGAAG--GAGAAACGGTTCTCCTGCCCG 293 consensus_1627#1 CGCAC---AGATCTCACATGCTCCGAGGTGCACGGCATTGGGAAAACGTTCGACTGCACA 263 ** * * * ********** ** **** * **** **** **** * consensus_1627#0 TACTGTGCCGTGACGATGA---CGTTCAAGTCGAATCTAAACATCCATATCAAGACGGTC 350 consensus_1627#1 TG-TGTGCCANAAAGTTCAAACCACAACAGTTGGGCTTAAAT-CGCACATTGCCCGTGTG 321 * ****** * * * * * *** * **** ** ** ** consensus_1627#0 CATTTGAAGGAGATTTCGAAATCGTGCGAGCTGTGCGGGCAAGGATTCGTCAATTACAAT 410 consensus_1627#1 CACAGCAATGAGCGAAAGTTNGAGTGCGAAACGTGTGG--CATGCTGTTTAAAGTGAAAG 379 ** ** *** * ****** *** ** * * * * ** * ** consensus_1627#0 TC--CTACAAGAACCATATGGCCTCGCAGC--ACGGAACGGGTGAGTACAGCTGTGAAAC 466 consensus_1627#1 TCGGCCTTACGAAGCATCAGCTAGTGCACTCGACGGAGCAACCGTACGCGTGCAATCAAT 439 ** * * *** *** * *** ***** * * * ** consensus_1627#0 GTGTGCGAAAAGGTTTACGCATCTGCGAACGTACAACATGCACGTGCGCCGGCACCATAA 526 consensus_1627#1 GTCCTGAAACGGTTTAAAACGTCTGCCA-TGGACGCAATTCACACCAACTGAC-CCACAG 497 ** ** * ** * * ***** * * ** ** *** * * * *** * consensus_1627#0 AGCCG--ATGCGACGTACAAGAAAAAGAAGCAACTTTGTGGCACGTGCGGCGCCATGGTT 584 consensus_1627#1 TGGCATAGTGTTTCCGATGTCCGNACTGTGAAAAATCGATACCGGTACAAAGATGTGCTT 557 * * ** * * * * ** * * * ** * * ** ** consensus_1627#0 ACGCACATAGCGACGCACATGCT-CACCCATACGCAGGAGAAGCGGTACGCCTGTCCGCA 643 consensus_1627#1 GCGCATTCACATTCGCGCGAGAAGCATCCCGNAGCNACAGGAGGAGCAAGATCGATAGCG 617 **** * *** * * ** ** ** ** ** * * * * ** consensus_1627#0 CTGTCCGATCGAAATGGTGG 663 consensus_1627#1 CTGTGNC------------- 624 **** |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||