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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1629#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 930 fasta sequence
[CAAGAATCCCCGAGGTTAAATGTACAGCGCAGTTGACATGTAATACACAGGTTTGTTTTGTGTGGCCCGAATTTAACGAATTATTCCAAAAAGAGCCAACAATGAAGAGAAATAAGTGAACCACTCGGACCTGCGTGCAAAAAGAGCCAAAGAATCAAATAAAATTGCTGCCGAAACTGTGNGAAGCGTGAGTGAGTGTGCTTGTATCTTCTCGATGTCTACGAATCAGCACTGCTGCAATTGATCAATCGTACGATTGAAACCGAAGATGATTTGTGGATTACGGTGTCGGAAAACCTGTACGATCAGGGCATAGACGCTTCTGCAGTTCGTTGTACAAAGCAACATGGAATCTGCTAGCAGAAAACCTACTTGAGTAAACCCCGGCATAAAAGGTTGCTTAAACGTGAAAGTCAACACAANATACCTGGATACAGCAGCCAGTGTAAGGAACGTACCCGTAGAATCGNTTGGGACAGGANACGCAACTGAACGGAAAGGNAAATACCGTGCCAGAAGGNACGGCTGCATGAACACACTGGCAANGGCTACGAAACGGCGCTTGCAAGCATTGAGAATAACGATAGCGGAACAGAGCATCGTACACTGGACATTATCCACAACACCCGAGGAAACAACAACCTACANNGCAAGTACCTTTAACCACACCGAACCGGAGTCCGCGGGCAACTTTCACCTTNGNCACGNGGCNGAAGCTCCAGNACAGCNTGGACTTATGCCGNGCCGGTTGGNATTCTGAGGCCGAATTGGTGTTGGGCAACAACTAGCGATACACCTTAACCCGGCGATTGCACGCACCGGGCAAGAANGCACCGNACCTTGCCGGCAGGGTATATNNCAAAATNGCGAGCGCNANTAAATGGAGAGATCACTCATCTTTGACCACACTCAGAAAAACCCGTTAACAAT]
[+] EMBL AL693119 [CAAGAATCCCCGAGGTTAAATGTACAGCGCAGTTGACATGTAATACACAGGTTTGTTTTGTGTGGCCCGAATTTAACGAATTATTCCAAAAAGAGCCAACAATGAAGAGAAATAAGTGAACCACTCGGACCTGCGTGCAAAAAGAGCCAAAGAATCAAATAAAATTGCTGCCGAAACTGTGNGAAGCGTGAGTGAGTGTGCTTGTATCTTCTCGATGTCTACGAATCAGCACTGCTGCAATTGATCAATCGTACGATTGAAACCGAAGATGATTTGTGGATTACGGTGTCGGAAAACCTGTACGATCAGGGCATAGACGCTTCTGCAGTTCGTTGTACAAAGCAACATGGAATCTGCTAGCAGAAAACCTACTTGAGTAAACCCCGGCATAAAAGGTTGCTTAAACGTGAAAGTCAACACAANATACCTGGATACAGCAGCCAGTGTAAGGAACGTACCCGTAGAATCGNTTGGGACAGGANACGCAACTGAACGGAAAGGNAAATACCGTGCCAGAAGGNACGGCTGCATGAACACACTGGCAANGGCTACGAAACGGCGCTTGCAAGCATTGAGAATAACGATAGCGGAACAGAGCATCGTACACTGGACATTATCCACAACACCCGAGGAAACAACAACCTACANNGCAAGTACCTTTAACCACACCGAACCGGAGTCCGCGGGCAACTTTCACCTTNGNCACGNGGCNGAAGCTCCAGNACAGCNTGGACTTATGCCGNGCCGGTTGGNATTCTGAGGCCGAATTGGTGTTGGGCAACAACTAGCGATACACCTTAACCCGGCGATTGCACGCACCGGGCAAGAANGCACCGNACCTTGCCGGCAGGGTATATNNCAAAATNGCGAGCGCNANTAAATGGAGAGATCACTCATCTTTGACCACACTCAGAAAAACCCGTTAACAAT]
consensusID : consensus_1629#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 593 fasta sequence
[AATGTAAACACACAGGTTTGTTTTGTGTGGCCCCGAATTTAACGAATTATTCCAAAAAGAGCCAACAATGAAGAGAAATAAGGAACCACTCGGACCAGCGGCAAAAAGAGCCAAAGAATCAAATAAAATTGCGCCGAAACTGTGGAAGCGTGAGGAGGTGCTTGTTCTTCTCGATGTCTACGAATCAGCACTGCTGCAATTGATCAATCGTACGATTGAAACCGAAGATGATTTGTGGATTACGGTGTCGGAAAACCTGTACGATCAGGGCATAGACGCTTCTGCAGTTCGTTGTCAAAGCAAATGGAATCTGCTGCAAAAAACCTACTTGGCTAACCCCGGCATAAAAGGTGCTTTTTTCGTGAAAGTCAAACAAATACTGGATACAGCAGCCAGTGTAGAGGAACGTACCGTAGAATCGTTGGAAGAAGAAATGAAGGAAGAAATACGTGCAGAGGAGGCTGAGAACACATGCAAGGTAGAACGGCTTGAAGATGAGATAGTAGCGGAAGAGATCGTCATGGAATTTCCACACACCGAGGAACACACTACGAATTCTTTAACCACCGAACGAGTCGCGGAATTACTTGCAG]
[+] EMBL BX628120 [AATGTAAACACACAGGTTTGTTTTGTGTGGCCCCGAATTTAACGAATTATTCCAAAAAGAGCCAACAATGAAGAGAAATAAGGAACCACTCGGACCAGCGGCAAAAAGAGCCAAAGAATCAAATAAAATTGCGCCGAAACTGTGGAAGCGTGAGGAGGTGCTTGTTCTTCTCGATGTCTACGAATCAGCACTGCTGCAATTGATCAATCGTACGATTGAAACCGAAGATGATTTGTGGATTACGGTGTCGGAAAACCTGTACGATCAGGGCATAGACGCTTCTGCAGTTCGTTGTCAAAGCAAATGGAATCTGCTGCAAAAAACCTACTTGGCTAACCCCGGCATAAAAGGTGCTTTTTTCGTGAAAGTCAAACAAATACTGGATACAGCAGCCAGTGTAGAGGAACGTACCGTAGAATCGTTGGAAGAAGAAATGAAGGAAGAAATACGTGCAGAGGAGGCTGAGAACACATGCAAGGTAGAACGGCTTGAAGATGAGATAGTAGCGGAAGAGATCGTCATGGAATTTCCACACACCGAGGAACACACTACGAATTCTTTAACCACCGAACGAGTCGCGGAATTACTTGCAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1629#0 CAAGAATCCCCGAGGTTAAATGTACAGCGCAGTTGACATGTAA-TACACAGGTTTGTTTT 59
consensus_1629#1 ------------------------------------AATGTAAACACACAGGTTTGTTTT 24
****** ***************
consensus_1629#0 GTGTGGCCC-GAATTTAACGAATTATTCCAAAAAGAGCCAACAATGAAGAGAAATAAGTG 118
consensus_1629#1 GTGTGGCCCCGAATTTAACGAATTATTCCAAAAAGAGCCAACAATGAAGAGAAATAAG-G 83
********* ************************************************ *
consensus_1629#0 AACCACTCGGACCTGCGTGCAAAAAGAGCCAAAGAATCAAATAAAATTGCTGCCGAAACT 178
consensus_1629#1 AACCACTCGGACCAGCG-GCAAAAAGAGCCAAAGAATCAAATAAAATTGC-GCCGAAACT 141
************* *** ******************************** *********
consensus_1629#0 GTGNGAAGCGTGAGTGAGTGTGCTTGTATCTTCTCGATGTCTACGAATCAGCACTGCTGC 238
consensus_1629#1 GTGG-AAGCGTGAG-GAG-GTGCTTGT-TCTTCTCGATGTCTACGAATCAGCACTGCTGC 197
*** ********* *** ******** ********************************
consensus_1629#0 AATTGATCAATCGTACGATTGAAACCGAAGATGATTTGTGGATTACGGTGTCGGAAAACC 298
consensus_1629#1 AATTGATCAATCGTACGATTGAAACCGAAGATGATTTGTGGATTACGGTGTCGGAAAACC 257
************************************************************
consensus_1629#0 TGTACGATCAGGGCATAGACGCTTCTGCAGTTCGTTGTACAAAGCAACATGGAATCTGCT 358
consensus_1629#1 TGTACGATCAGGGCATAGACGCTTCTGCAGTTCGTTGT-CAAAGCAA-ATGGAATCTGCT 315
************************************** ******** ************
consensus_1629#0 AGCAGAAAACCTACTTGAGTAAACCCCGGCATAAAAGGTTGCTTAAACGTGAAAGTCAAC 418
consensus_1629#1 -GCAAAAAACCTACTTG-GCTAACCCCGGCATAAAAGGTGCTTTTTTCGTGAAAGTCAAA 373
*** ************ * ****************** ** ************
consensus_1629#0 ACAANATACCTGGATACAGCAGCCAGTGTA-AGGAACGTACCCGTAGAATCGNTTGGGAC 477
consensus_1629#1 CAAATA---CTGGATACAGCAGCCAGTGTAGAGGAACGTACC-GTAGAATCGTTGGA--- 426
** * ********************* *********** ********* * *
consensus_1629#0 AGGANACGCAACTGAACGGAAAGGNAAATACCGTGCCAGAAGGNACGGCTGCATGAACAC 537
consensus_1629#1 AGAAGA--------AATGAAGGAAGAAATAC-GTGC-AGAGGAGGC-------TGAGAAC 469
** * * ** * * ****** **** *** * * *** **
consensus_1629#0 ACTGGCAANGGCTACGAAACGGCGCTTGCAAGCATTGAGAATAACGATAGCGGAACAGAG 597
consensus_1629#1 ACATGCAAGG----TAGAACGGC--TTGAAGA---TGAGA----TAGTAGCGGAAGAGAT 516
** **** * ****** *** * ***** ******** ***
consensus_1629#0 CATCGTACACTGGACATTATCCACAACACCCGAGGAAACAACAACCTACANNGCAAGTAC 657
consensus_1629#1 CGTCAT-----GGAATTTCCACACA----CCGAGGAA---------CACACTACGAAT-T 557
* ** * *** ** **** ******** *** * * *
consensus_1629#0 CTTTAACCACACCGAACCGGAGTCCGCGGGCAACTTTCACCTTNGNCACGNGGCNGAAGC 717
consensus_1629#1 CTTTAACCA--CCGAAC--GAGTCGCGGAATTACTTGCAG-------------------- 593
********* ****** ***** * **** **
consensus_1629#0 TCCAGNACAGCNTGGACTTATGCCGNGCCGGTTGGNATTCTGAGGCCGAATTGGTGTTGG 777
consensus_1629#1 ------------------------------------------------------------
consensus_1629#0 GCAACAACTAGCGATACACCTTAACCCGGCGATTGCACGCACCGGGCAAGAANGCACCGN 837
consensus_1629#1 ------------------------------------------------------------
consensus_1629#0 ACCTTGCCGGCAGGGTATATNNCAAAATNGCGAGCGCNANTAAATGGAGAGATCACTCAT 897
consensus_1629#1 ------------------------------------------------------------
consensus_1629#0 CTTTGACCACACTCAGAAAAACCCGTTAACAAT 930
consensus_1629#1 ---------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||