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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1694#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 829 fasta sequence
[AATTGCCGAGGCTTTCTGCGCGGCACTGAGTGCAAAGTGTAGATATAATGCGCCGCCCCGGCTCCACACGTGCACTGACCCGACCAAATTCGTCAGCCGCTCAAAATACGATTCGCTGCCGATCTGTAACCAAAACGAAGTCGTAATGCGCCGCCGCCGGGTCGCCGGCCCCGCCGCCGACGCCGCTGTGGACTTGCAGACCACGGTTGGCGCCTGGCTGCTCCCAACCCCTCGGGTGCGGGCATGCTGCCTGCCCGTGCGCCTGCTGTGGCTGGTGGTGCGCGTCGACAGCTGCGCGGGTCGGCCAAGCGGGGCTCATGGGGAACACCACAAACATCGTCAGCACTACGTGCCAGCAGAAACTGCTGCCTGATTTGCCATCTGCTGATCCACACCCACTGCCTGCTGCAGCTGCTGGCTGACATGCTGGCATGCCACATGCCTGCTGCGTGGCCTTGGCTGCTTCACCCACCCTGCCTGGCTGCCTGACCTGCCTGTGTGGTACTGCTGTTGCTGCTGGGGCTGACTGCGCTGCTTCGCGCAGCCACGAAAGCAGCAGCACCGCTAGCAGCAGCGCCACCACGCGCAGGGCCCAGAGCTTGGCCTGCGCATATGTGGCCTTCGCGTAAGTAGTAGTTGTAGCCGTACGGTGTGTCGTCCGAATCGCTGAACGCCAGCCACTGCCCGGGGCTCACCTCCACGGCGTGCATATGGTGCACGCGGTACAGACACCACCGGGAGCTGGCGCCGGTACCGACCGGTTCCGCCGCGCCCGTCGCAGCCAGCGCCTGCTGCTCGTTCGCGGAAAGCGGCTGAGCTGGGCGGATGC]
[+] EMBL AL693557 [AATTGCCGAGGCTTTCTGCGCGGCACTGAGTGCAAAGTGTAGATATAATGCGCCGCCCCGGCTCCACACGTGCACTGACCCGACCAAATTCGTCAGCCGCTCAAAATACGATTCGCTGCCGATCTGTAACCAAAACGAAGTCGTAATGCGCCGCCGCCGGGTCGCCGGCCCCGCCGCCGACGCCGCTGTGGACTTGCAGACCACGGTTGGCGCCTGGCTGCTCCCAACCCCTCGGGTGCGGGCATGCTGCCTGCCCGTGCGCCTGCTGTGGCTGGTGGTGCGCGTCGACAGCTGCGCGGGTCGGCCAAGCGGGGCTCATGGGGAACACCACAAACATCGTCAGCACTACGTGCCAGCAGAAACTGCTGCCTGATTTGCCATCTGCTGATCCACACCCACTGCCTGCTGCAGCTGCTGGCTGACATGCTGGCATGCCACATGCCTGCTGCGTGGCCTTGGCTGCTTCACCCACCCTGCCTGGCTGCCTGACCTGCCTGTGTGGTACTGCTGTTGCTGCTGGGGCTGACTGCGCTGCTTCGCGCAGCCACGAAAGCAGCAGCACCGCTAGCAGCAGCGCCACCACGCGCAGGGCCCAGAGCTTGGCCTGCGCATATGTGGCCTTCGCGTAAGTAGTAGTTGTAGCCGTACGGTGTGTCGTCCGAATCGCTGAACGCCAGCCACTGCCCGGGGCTCACCTCCACGGCGTGCATATGGTGCACGCGGTACAGACACCACCGGGAGCTGGCGCCGGTACCGACCGGTTCCGCCGCGCCCGTCGCAGCCAGCGCCTGCTGCTCGTTCGCGGAAAGCGGCTGAGCTGGGCGGATGC]
consensusID : consensus_1694#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 406 fasta sequence
[CCGGCTCCCACACGTGCACTGNACCCGACCNAATTCGTCAGCCGCTCAAAATACGATTCGCTGCCGATCGTAACCAAAACGAAGTCGTAATGCGCCGCCGCCGGGTCCGCCGGCCCCGCCGCCGACGCCGCTGTGGACTGCAGACCACGGTTGGCGCCGGCTGCTCCCANCCCCTCGGGTGCGGGCAGCGCCTGCCCGTGCGCCTGCTGTGGCGGTGGNGCGCGTCCGACAGCGCGCGGGTCGGCCCAANNGGGGCTCATGGGGAACACCACAAACATCGNCAGCACTACGGNCAGCATAAACGCGCCGATGGNCATCGCNATCCACACCCACTGCCGCTGCANAGCGGCCGACAGCGGCAGCCACNGCCNCTGCGTGGCACTGGCGCTTCANCCACCCGCCGGCG]
[+] EMBL BX627654 [CCGGCTCCCACACGTGCACTGNACCCGACCNAATTCGTCAGCCGCTCAAAATACGATTCGCTGCCGATCGTAACCAAAACGAAGTCGTAATGCGCCGCCGCCGGGTCCGCCGGCCCCGCCGCCGACGCCGCTGTGGACTGCAGACCACGGTTGGCGCCGGCTGCTCCCANCCCCTCGGGTGCGGGCAGCGCCTGCCCGTGCGCCTGCTGTGGCGGTGGNGCGCGTCCGACAGCGCGCGGGTCGGCCCAANNGGGGCTCATGGGGAACACCACAAACATCGNCAGCACTACGGNCAGCATAAACGCGCCGATGGNCATCGCNATCCACACCCACTGCCGCTGCANAGCGGCCGACAGCGGCAGCCACNGCCNCTGCGTGGCACTGGCGCTTCANCCACCCGCCGGCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1694#0 AATTGCCGAGGCTTTCTGCGCGGCACTGAGTGCAAAGTGTAGATATAATGCGCCGCCCCG 60
consensus_1694#1 ---------------------------------------------------------CCG 3
***
consensus_1694#0 GCTCC-ACACGTGCACTGA-CCCGACCAAATTCGTCAGCCGCTCAAAATACGATTCGCTG 118
consensus_1694#1 GCTCCCACACGTGCACTGNACCCGACCNAATTCGTCAGCCGCTCAAAATACGATTCGCTG 63
***** ************ ******* ********************************
consensus_1694#0 CCGATCTGTAACCAAAACGAAGTCGTAATGCGCCGCCGCCGGGTC-GCCGGCCCCGCCGC 177
consensus_1694#1 CCGATC-GTAACCAAAACGAAGTCGTAATGCGCCGCCGCCGGGTCCGCCGGCCCCGCCGC 122
****** ************************************** **************
consensus_1694#0 CGACGCCGCTGTGGACTTGCAGACCACGGTTGGCGCCTGGCTGCTCCCAACCCCTCGGGT 237
consensus_1694#1 CGACGCCGCTGTGGACT-GCAGACCACGGTTGGCGCC-GGCTGCTCCCANCCCCTCGGGT 180
***************** ******************* *********** **********
consensus_1694#0 GCGGGCATGCTGCCTGCCCGTGCGCCTGCTGTGGCTGGTGGTGCGCGTC-GACAGCTGCG 296
consensus_1694#1 GCGGGCAG--CGCCTGCCCGTGCGCCTGCTGTGGC-GGTGGNGCGCGTCCGACAGC-GCG 236
******* ************************ ***** ******* ****** ***
consensus_1694#0 CGGGTCGGCC-AAGCGGGGCTCATGGGGAACACCACAAACATCGTCAGCACTACGTGCCA 355
consensus_1694#1 CGGGTCGGCCCAANNGGGGCTCATGGGGAACACCACAAACATCGNCAGCACTACG-GNCA 295
********** ** ***************************** ********** * **
consensus_1694#0 GCAGAAACTGCTGCCTGATTTGCCATCTGCTGATCCACACCCACTGCCTGCTGCAGCTGC 415
consensus_1694#1 GCATAAAC----GCGCCGATGGNCATC--GCNATCCACACCCACTGCC-GCTGCA--NAG 346
*** **** ** * * **** **************** ******
consensus_1694#0 TGGCTGACATGCTGGCATGCCACATGCCTGCTGCGTGGCCTTGGCTGCTTCACCCACCCT 475
consensus_1694#1 CGGCCGACA--GCGGCA-GCCACNG--CCNCTGCGTGGCACTGGC-GCTTCANCCACCC- 399
*** **** **** ***** * ********* **** ****** ******
consensus_1694#0 GCCTGGCTGCCTGACCTGCCTGTGTGGTACTGCTGTTGCTGCTGGGGCTGACTGCGCTGC 535
consensus_1694#1 -GCCGGCG---------------------------------------------------- 406
* ***
consensus_1694#0 TTCGCGCAGCCACGAAAGCAGCAGCACCGCTAGCAGCAGCGCCACCACGCGCAGGGCCCA 595
consensus_1694#1 ------------------------------------------------------------
consensus_1694#0 GAGCTTGGCCTGCGCATATGTGGCCTTCGCGTAAGTAGTAGTTGTAGCCGTACGGTGTGT 655
consensus_1694#1 ------------------------------------------------------------
consensus_1694#0 CGTCCGAATCGCTGAACGCCAGCCACTGCCCGGGGCTCACCTCCACGGCGTGCATATGGT 715
consensus_1694#1 ------------------------------------------------------------
consensus_1694#0 GCACGCGGTACAGACACCACCGGGAGCTGGCGCCGGTACCGACCGGTTCCGCCGCGCCCG 775
consensus_1694#1 ------------------------------------------------------------
consensus_1694#0 TCGCAGCCAGCGCCTGCTGCTCGTTCGCGGAAAGCGGCTGAGCTGGGCGGATGC 829
consensus_1694#1 ------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||