These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1696#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 713 fasta sequence [GATCTGGGTGTCGAAAGTGGGAGCAAACGTTGCGCTTGGATTCATCATCCTGGCCGGCATTATCCAGCGGGATTGTACTTTTTTCTTTCCTGTGCTACCATTGATCTGGAAAAGTGTTTTGGCAAACCATTCAACCAATTTAAAGGCGCACCATCGCTCCCGTACGGATTGTCGTCCCGGCCAGACCGGGCGTTACACTACCGAAAGGGCCAATTCATCTAATCGCTTCCAGTNTTTACTAATGCTGGCCACGCTGCTGTGTTGCGGCAATGACCGTGATTGGCTTCATCATTGGGCAGGTATCGGCAAGGGCGCTGGAAGTGGGACGATAACATCGATCTGGAGTTTACTTCGGCGTTCTTTACCGGCGTGTACGGCATGTGGAACATTTACATCTTTGCGCTGATCGTGCTAGTACGCTCCCAGCCATAAGCAAGTGGGCCACAACGAAACAACGAAAACATTCATTGAGCGAGGCAAATAGAGTTCAGCCAATCTGCCGTCCGATTCGAACCGAGCGAAATTTCGTACCCTGACACAGTTCGCTCGAAAGGCGGCCAGGATTAAGACTGCTATCCCGTTGGAAGACTGGGCTGGGCTTTGCGCCGTCGAANATTTCATACTAACCGATTACGATTACGAATTGCTCCAGGCTTTGGTCAAACCCGTGCAAGTCATAACTAAACCAGNATCCTTAAACTCACGTCGTAAGC] [+] EMBL AL693566 [GATCTGGGTGTCGAAAGTGGGAGCAAACGTTGCGCTTGGATTCATCATCCTGGCCGGCATTATCCAGCGGGATTGTACTTTTTTCTTTCCTGTGCTACCATTGATCTGGAAAAGTGTTTTGGCAAACCATTCAACCAATTTAAAGGCGCACCATCGCTCCCGTACGGATTGTCGTCCCGGCCAGACCGGGCGTTACACTACCGAAAGGGCCAATTCATCTAATCGCTTCCAGTNTTTACTAATGCTGGCCACGCTGCTGTGTTGCGGCAATGACCGTGATTGGCTTCATCATTGGGCAGGTATCGGCAAGGGCGCTGGAAGTGGGACGATAACATCGATCTGGAGTTTACTTCGGCGTTCTTTACCGGCGTGTACGGCATGTGGAACATTTACATCTTTGCGCTGATCGTGCTAGTACGCTCCCAGCCATAAGCAAGTGGGCCACAACGAAACAACGAAAACATTCATTGAGCGAGGCAAATAGAGTTCAGCCAATCTGCCGTCCGATTCGAACCGAGCGAAATTTCGTACCCTGACACAGTTCGCTCGAAAGGCGGCCAGGATTAAGACTGCTATCCCGTTGGAAGACTGGGCTGGGCTTTGCGCCGTCGAANATTTCATACTAACCGATTACGATTACGAATTGCTCCAGGCTTTGGTCAAACCCGTGCAAGTCATAACTAAACCAGNATCCTTAAACTCACGTCGTAAGC] consensusID : consensus_1696#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 150 fasta sequence [TAGTNNGAAAGTGTTTTGACATCAATATTAAGCGCACCTCGCTCCCGTCGATGTCGTCCGCAGACGGTACACTACGAAGGCATCATCTATCGCTTCCAGTTTCTAATGCTGGCCACGCTGCTGTGTGCGGCAATGACCGTGATTGGTTCA] [+] EMBL AL697202 [TAGTNNGAAAGTGTTTTGACATCAATATTAAGCGCACCTCGCTCCCGTCGATGTCGTCCGCAGACGGTACACTACGAAGGCATCATCTATCGCTTCCAGTTTCTAATGCTGGCCACGCTGCTGTGTGCGGCAATGACCGTGATTGGTTCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1696#0 GATCTGGGTGTCGAAAGTGGGAGCAAACGTTGCGCTTGGATTCATCATCCTGGCCGGCAT 60 consensus_1696#1 ------------------------------------------------------------ consensus_1696#0 TATCCAGCGGGATTGTACTTTTTTCTTTCCTGTGCTACCATTGATCTGGAAAAGTGTTTT 120 consensus_1696#1 -----------------------------------------TAGTNNG--AAAGTGTTTT 17 * * * ********** consensus_1696#0 GGCAAACCATTCAACCAATTTAAAGGCGCACCATCGCTCCCGTACGGATTGTCGTCCCGG 180 consensus_1696#1 GAC----------ATCAATATTAAG-CGCACC-TCGCTCCCGT-CGA--TGTCGTCCG-- 60 * * * **** * *** ****** ********** ** ******** consensus_1696#0 CCAGACCGGGCGTTACACTACCGAAAGGGCCAATTCATCTAATCGCTTCCAGTNTTTACT 240 consensus_1696#1 ------CAGACGGTACACTAC---GAAGGCA---TCATCTA-TCGCTTCCAGTTT---CT 104 * * ** ******** * *** ******* *********** * ** consensus_1696#0 AATGCTGGCCACGCTGCTGTGTTGCGGCAATGACCGTGATTGGCTTCATCATTGGGCAGG 300 consensus_1696#1 AATGCTGGCCACGCTGCTGTGT-GCGGCAATGACCGTGATTGG-TTCA------------ 150 ********************** ******************** **** consensus_1696#0 TATCGGCAAGGGCGCTGGAAGTGGGACGATAACATCGATCTGGAGTTTACTTCGGCGTTC 360 consensus_1696#1 ------------------------------------------------------------ consensus_1696#0 TTTACCGGCGTGTACGGCATGTGGAACATTTACATCTTTGCGCTGATCGTGCTAGTACGC 420 consensus_1696#1 ------------------------------------------------------------ consensus_1696#0 TCCCAGCCATAAGCAAGTGGGCCACAACGAAACAACGAAAACATTCATTGAGCGAGGCAA 480 consensus_1696#1 ------------------------------------------------------------ consensus_1696#0 ATAGAGTTCAGCCAATCTGCCGTCCGATTCGAACCGAGCGAAATTTCGTACCCTGACACA 540 consensus_1696#1 ------------------------------------------------------------ consensus_1696#0 GTTCGCTCGAAAGGCGGCCAGGATTAAGACTGCTATCCCGTTGGAAGACTGGGCTGGGCT 600 consensus_1696#1 ------------------------------------------------------------ consensus_1696#0 TTGCGCCGTCGAANATTTCATACTAACCGATTACGATTACGAATTGCTCCAGGCTTTGGT 660 consensus_1696#1 ------------------------------------------------------------ consensus_1696#0 CAAACCCGTGCAAGTCATAACTAAACCAGNATCCTTAAACTCACGTCGTAAGC 713 consensus_1696#1 ----------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||