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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2413#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 637 fasta sequence
[CCGCGGACGCGTGGCAAGCTACACCGTGTTCTGGTGCAATACGACTAGCAACTCTCCGAACGATTGCAATGGATCCATAAACTTTACCAGTGTTGCCGCCGACCAGACCACTTTCGTGCTGAGCGATGTTGGGTCTACGATTAACTTTGCGGTAGCGGCTAACGCTGGGCGTGTGTCGTCGGGGATGGTGTGGGCAGCGTGTACAGCTACGCACAAAACCGACATTGGCAAACTGAAAACTATCTGGATCAGTGAGATGGATTCGTCGCAAATTCATCTCAAGTGGAAAACGGAATGCGTTGATGTGGCACATGTGGGATACATGATCTACTACTGTTCGATCTCGTCTCCACGTACGCTCGGCTGCAAGGAACCAGAGATGAAGATTAATGTGACGGATAAGACTCTGGACCACTTTCTGTTGGAAAATCTCCATCCATATGTGACATACAAAATTGAAATTGCCATGTACTCCGATACGCACATTGGGCCACGCAGCGTGCCGTTAGTAAATACTACTATGGAAGCAGCTCCATCACCGCCACGAAACTTAGTAACGGAAAGAGTAACAAATAACAGTATATCCCTCCACTGGGGAACCTCCGGCACACATAAACGGTGGAAAGATGTTCTACTG]
[+] EMBL BM596632 [CCGCGGACGCGTGGCAAGCTACACCGTGTTCTGGTGCAATACGACTAGCAACTCTCCGAACGATTGCAATGGATCCATAAACTTTACCAGTGTTGCCGCCGACCAGACCACTTTCGTGCTGAGCGATGTTGGGTCTACGATTAACTTTGCGGTAGCGGCTAACGCTGGGCGTGTGTCGTCGGGGATGGTGTGGGCAGCGTGTACAGCTACGCACAAAACCGACATTGGCAAACTGAAAACTATCTGGATCAGTGAGATGGATTCGTCGCAAATTCATCTCAAGTGGAAAACGGAATGCGTTGATGTGGCACATGTGGGATACATGATCTACTACTGTTCGATCTCGTCTCCACGTACGCTCGGCTGCAAGGAACCAGAGATGAAGATTAATGTGACGGATAAGACTCTGGACCACTTTCTGTTGGAAAATCTCCATCCATATGTGACATACAAAATTGAAATTGCCATGTACTCCGATACGCACATTGGGCCACGCAGCGTGCCGTTAGTAAATACTACTATGGAAGCAGCTCCATCACCGCCACGAAACTTAGTAACGGAAAGAGTAACAAATAACAGTATATCCCTCCACTGGGGAACCTCCGGCACACATAAACGGTGGAAAGATGTTCTACTG]
consensusID : consensus_2413#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 576 fasta sequence
[CCGCGCACGCAGTGGATTCCACTACAATATCACTCTGATTGACCAGCACGGAAGAATTGTCGAACACCTTAACACCACCGGGGGCATGATCGATCGACATCATTTAGTTGACATGAATTACACATTCGTAATAAAAAGTGCCAACCCGGAAGGTATGTCCGAACAAGCCAGCAAGGTGTTTGTTCCAGCTCGTCGCCATCGCCTTGACAAGCCTTCAATCGACAAGCTGCTGTCGGATTCGGGCAAATTTACGCTGTCCTGGAAACCTCCTTCAAGGATCCACTCTCCAATTACAAGCTACACCGTGTTCTGGTGCAATACGACTAGCAACTCTCCGAACGATTGCAATGGATCCATAAACTTTACCAGTGTTGCCGCCGACCAGACCACTTTCGTGCTGAGCGATGTTGGGTCTACGATTAACTTTGCGGTAGCGGCTAACGCTGGGCGTGTGTCGTCGGGGATGGTGTGGGCAGCGTGTACAGCTACGCACAAAACCGACATTGGCAAACTGAAAACTATCTGGATCAGTGAGATGGATTCGTCGCAAATTCATCTCAAGTGGAAAACGGAATG]
[+] EMBL BM618730 [CCGCGCACGCAGTGGATTCCACTACAATATCACTCTGATTGACCAGCACGGAAGAATTGTCGAACACCTTAACACCACCGGGGGCATGATCGATCGACATCATTTAGTTGACATGAATTACACATTCGTAATAAAAAGTGCCAACCCGGAAGGTATGTCCGAACAAGCCAGCAAGGTGTTTGTTCCAGCTCGTCGCCATCGCCTTGACAAGCCTTCAATCGACAAGCTGCTGTCGGATTCGGGCAAATTTACGCTGTCCTGGAAACCTCCTTCAAGGATCCACTCTCCAATTACAAGCTACACCGTGTTCTGGTGCAATACGACTAGCAACTCTCCGAACGATTGCAATGGATCCATAAACTTTACCAGTGTTGCCGCCGACCAGACCACTTTCGTGCTGAGCGATGTTGGGTCTACGATTAACTTTGCGGTAGCGGCTAACGCTGGGCGTGTGTCGTCGGGGATGGTGTGGGCAGCGTGTACAGCTACGCACAAAACCGACATTGGCAAACTGAAAACTATCTGGATCAGTGAGATGGATTCGTCGCAAATTCATCTCAAGTGGAAAACGGAATG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2413#0 ------------------------------------------------------------
consensus_2413#1 CCGCGCACGCAGTGGATTCCACTACAATATCACTCTGATTGACCAGCACGGAAGAATTGT 60
consensus_2413#0 ------------------------------------------------------------
consensus_2413#1 CGAACACCTTAACACCACCGGGGGCATGATCGATCGACATCATTTAGTTGACATGAATTA 120
consensus_2413#0 ------------------------------------------------------------
consensus_2413#1 CACATTCGTAATAAAAAGTGCCAACCCGGAAGGTATGTCCGAACAAGCCAGCAAGGTGTT 180
consensus_2413#0 ------------------------------------------------------------
consensus_2413#1 TGTTCCAGCTCGTCGCCATCGCCTTGACAAGCCTTCAATCGACAAGCTGCTGTCGGATTC 240
consensus_2413#0 ---------------------------------------CCGCGGACGCGTGGCAAGCTA 21
consensus_2413#1 GGGCAAATTTACGCTGTCCTGGAAACCTCCTTCAAGGATCCACTCTCCAATTACAAGCTA 300
** * * * *******
consensus_2413#0 CACCGTGTTCTGGTGCAATACGACTAGCAACTCTCCGAACGATTGCAATGGATCCATAAA 81
consensus_2413#1 CACCGTGTTCTGGTGCAATACGACTAGCAACTCTCCGAACGATTGCAATGGATCCATAAA 360
************************************************************
consensus_2413#0 CTTTACCAGTGTTGCCGCCGACCAGACCACTTTCGTGCTGAGCGATGTTGGGTCTACGAT 141
consensus_2413#1 CTTTACCAGTGTTGCCGCCGACCAGACCACTTTCGTGCTGAGCGATGTTGGGTCTACGAT 420
************************************************************
consensus_2413#0 TAACTTTGCGGTAGCGGCTAACGCTGGGCGTGTGTCGTCGGGGATGGTGTGGGCAGCGTG 201
consensus_2413#1 TAACTTTGCGGTAGCGGCTAACGCTGGGCGTGTGTCGTCGGGGATGGTGTGGGCAGCGTG 480
************************************************************
consensus_2413#0 TACAGCTACGCACAAAACCGACATTGGCAAACTGAAAACTATCTGGATCAGTGAGATGGA 261
consensus_2413#1 TACAGCTACGCACAAAACCGACATTGGCAAACTGAAAACTATCTGGATCAGTGAGATGGA 540
************************************************************
consensus_2413#0 TTCGTCGCAAATTCATCTCAAGTGGAAAACGGAATGCGTTGATGTGGCACATGTGGGATA 321
consensus_2413#1 TTCGTCGCAAATTCATCTCAAGTGGAAAACGGAATG------------------------ 576
************************************
consensus_2413#0 CATGATCTACTACTGTTCGATCTCGTCTCCACGTACGCTCGGCTGCAAGGAACCAGAGAT 381
consensus_2413#1 ------------------------------------------------------------
consensus_2413#0 GAAGATTAATGTGACGGATAAGACTCTGGACCACTTTCTGTTGGAAAATCTCCATCCATA 441
consensus_2413#1 ------------------------------------------------------------
consensus_2413#0 TGTGACATACAAAATTGAAATTGCCATGTACTCCGATACGCACATTGGGCCACGCAGCGT 501
consensus_2413#1 ------------------------------------------------------------
consensus_2413#0 GCCGTTAGTAAATACTACTATGGAAGCAGCTCCATCACCGCCACGAAACTTAGTAACGGA 561
consensus_2413#1 ------------------------------------------------------------
consensus_2413#0 AAGAGTAACAAATAACAGTATATCCCTCCACTGGGGAACCTCCGGCACACATAAACGGTG 621
consensus_2413#1 ------------------------------------------------------------
consensus_2413#0 GAAAGATGTTCTACTG 637
consensus_2413#1 ----------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||