cluster # 2432

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Anopheles gambiae
cluster # 2432 cluster # 2432 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2432#0 length = 668 sequences # 1

consensus_2432#1 length = 638 sequences # 1

consensusID : consensus_2432#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 668
fasta sequence

                              [AAGAATCGGCNCGAGGCATGTGAACCATCATCACGTGGGAACCGGTTTGAAGGGGTCCGGAACTTCGGGTGGGGTAGAGGCCATCGAAACCGGGACTGCGATAGAGCTGCGCCGTAAAACGAGAAGTGCAGCTGGACTCGAAGTCACCGTGACTGAGGGACGTCGAAGAAGGATCTCCCGAGATAGCAAGTGACCAACAGTTTTGCGCCTCAGCCGCTAGCGACGATAGCAAACGCTATCGGCATAGGCCAGAAGGTATTATTACCTGTGCCCCGCTGCAACTGTGTTGACTGAGTCATCATCGTAAACGATTGTCTGACGAGTGTCCATTGCACGGCGGTCAACAATGTTGGGCCAGTTTTCAAGTGGAACTGTTGTGATGGAAGGTGAAAGTGCTGAAACTGAAGACGGGAAGCAGTACTTTGCTGAGCAGGAATGAAGTGACAGTAGTGGAGTGTAACGATGTTGATCAGAGAGGCGATTGATGCAAGCTGGCACGTCGATGAATCTGTATGGCATGTTGCATAAAGAAGCTGAGGTGCAAAATCTACGCGAAGTGGCGCGGAAAAGAGGCGTAAAAGCAGAGATGACAAAGCCGAAGCCCCGTAGCTGCGCCGCCGGTAAAGCGCTGTTGAATGGTGGAGATAATGCGTTTGGCTGCGGGATCC]

[+] EMBL BX468580             [AAGAATCGGCNCGAGGCATGTGAACCATCATCACGTGGGAACCGGTTTGAAGGGGTCCGGAACTTCGGGTGGGGTAGAGGCCATCGAAACCGGGACTGCGATAGAGCTGCGCCGTAAAACGAGAAGTGCAGCTGGACTCGAAGTCACCGTGACTGAGGGACGTCGAAGAAGGATCTCCCGAGATAGCAAGTGACCAACAGTTTTGCGCCTCAGCCGCTAGCGACGATAGCAAACGCTATCGGCATAGGCCAGAAGGTATTATTACCTGTGCCCCGCTGCAACTGTGTTGACTGAGTCATCATCGTAAACGATTGTCTGACGAGTGTCCATTGCACGGCGGTCAACAATGTTGGGCCAGTTTTCAAGTGGAACTGTTGTGATGGAAGGTGAAAGTGCTGAAACTGAAGACGGGAAGCAGTACTTTGCTGAGCAGGAATGAAGTGACAGTAGTGGAGTGTAACGATGTTGATCAGAGAGGCGATTGATGCAAGCTGGCACGTCGATGAATCTGTATGGCATGTTGCATAAAGAAGCTGAGGTGCAAAATCTACGCGAAGTGGCGCGGAAAAGAGGCGTAAAAGCAGAGATGACAAAGCCGAAGCCCCGTAGCTGCGCCGCCGGTAAAGCGCTGTTGAATGGTGGAGATAATGCGTTTGGCTGCGGGATCC]




>consensus_2432#0
AAGAATCGGCNCGAGGCATGTGAACCATCATCACGTGGGAACCGGTTTGAAGGGGTCCGG
AACTTCGGGTGGGGTAGAGGCCATCGAAACCGGGACTGCGATAGAGCTGCGCCGTAAAAC
GAGAAGTGCAGCTGGACTCGAAGTCACCGTGACTGAGGGACGTCGAAGAAGGATCTCCCG
AGATAGCAAGTGACCAACAGTTTTGCGCCTCAGCCGCTAGCGACGATAGCAAACGCTATC
GGCATAGGCCAGAAGGTATTATTACCTGTGCCCCGCTGCAACTGTGTTGACTGAGTCATC
ATCGTAAACGATTGTCTGACGAGTGTCCATTGCACGGCGGTCAACAATGTTGGGCCAGTT
TTCAAGTGGAACTGTTGTGATGGAAGGTGAAAGTGCTGAAACTGAAGACGGGAAGCAGTA
CTTTGCTGAGCAGGAATGAAGTGACAGTAGTGGAGTGTAACGATGTTGATCAGAGAGGCG
ATTGATGCAAGCTGGCACGTCGATGAATCTGTATGGCATGTTGCATAAAGAAGCTGAGGT
GCAAAATCTACGCGAAGTGGCGCGGAAAAGAGGCGTAAAAGCAGAGATGACAAAGCCGAA
GCCCCGTAGCTGCGCCGCCGGTAAAGCGCTGTTGAATGGTGGAGATAATGCGTTTGGCTG
CGGGATCC

consensusID : consensus_2432#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 638
fasta sequence

                              [AAGAATNGCCGAGGTNGAGATAGCAGTGACAACAGTTTGCGCCTCAGCCGCTAGCGACGATGAGCAACGCTATCGGCATAGGCCAGAAGGTATTATTACCTGTGCCCGCTGCAACTGTGTTGATGATCATCATCGTAACGATTGTCTGACGAGTGTCCATTGCACGGCGGTCAACAATGTTGGGCCAGTTTCAAGTGGAACTGTTGTGATGGAAGGTGAAAGTGCTGAAACTGAAGACGGGAAGCAGTACTTTGCTGAGCAGAATGAAGTGACAGTAGTGGAGTGTAACGATGTTGATCAGAGAGGCATTGATGCAAGCTGGCACGTCGATGAATCTGTTGGCATGTTGCATAAAGAAGCTGAGGTGCAAAATCTACGCGAAGTGGCGCGGAAAAGAGGCGTAAAAGCAGAGATGACAAAGCCAACCCCTAGCTGCGCCGCCGGTAAAGCGCTGTTGAATGGTGGAGATAATGCTTTGGCTGCGGGATCCGGCACTTTGACGTGTCGTAATGATGATACTGCTGGTACAGGTGACCAAGTACGATCAGCGGCGAAGGAAACCGGAGGCAACGCGGAGGACGAAGATTCGTACGCCAGTGAAATCATTCTCACGACTAACAGCGACTGCAGCCTANACG]

[+] EMBL AL930143             [AAGAATNGCCGAGGTNGAGATAGCAGTGACAACAGTTTGCGCCTCAGCCGCTAGCGACGATGAGCAACGCTATCGGCATAGGCCAGAAGGTATTATTACCTGTGCCCGCTGCAACTGTGTTGATGATCATCATCGTAACGATTGTCTGACGAGTGTCCATTGCACGGCGGTCAACAATGTTGGGCCAGTTTCAAGTGGAACTGTTGTGATGGAAGGTGAAAGTGCTGAAACTGAAGACGGGAAGCAGTACTTTGCTGAGCAGAATGAAGTGACAGTAGTGGAGTGTAACGATGTTGATCAGAGAGGCATTGATGCAAGCTGGCACGTCGATGAATCTGTTGGCATGTTGCATAAAGAAGCTGAGGTGCAAAATCTACGCGAAGTGGCGCGGAAAAGAGGCGTAAAAGCAGAGATGACAAAGCCAACCCCTAGCTGCGCCGCCGGTAAAGCGCTGTTGAATGGTGGAGATAATGCTTTGGCTGCGGGATCCGGCACTTTGACGTGTCGTAATGATGATACTGCTGGTACAGGTGACCAAGTACGATCAGCGGCGAAGGAAACCGGAGGCAACGCGGAGGACGAAGATTCGTACGCCAGTGAAATCATTCTCACGACTAACAGCGACTGCAGCCTANACG]




>consensus_2432#1
AAGAATNGCCGAGGTNGAGATAGCAGTGACAACAGTTTGCGCCTCAGCCGCTAGCGACGA
TGAGCAACGCTATCGGCATAGGCCAGAAGGTATTATTACCTGTGCCCGCTGCAACTGTGT
TGATGATCATCATCGTAACGATTGTCTGACGAGTGTCCATTGCACGGCGGTCAACAATGT
TGGGCCAGTTTCAAGTGGAACTGTTGTGATGGAAGGTGAAAGTGCTGAAACTGAAGACGG
GAAGCAGTACTTTGCTGAGCAGAATGAAGTGACAGTAGTGGAGTGTAACGATGTTGATCA
GAGAGGCATTGATGCAAGCTGGCACGTCGATGAATCTGTTGGCATGTTGCATAAAGAAGC
TGAGGTGCAAAATCTACGCGAAGTGGCGCGGAAAAGAGGCGTAAAAGCAGAGATGACAAA
GCCAACCCCTAGCTGCGCCGCCGGTAAAGCGCTGTTGAATGGTGGAGATAATGCTTTGGC
TGCGGGATCCGGCACTTTGACGTGTCGTAATGATGATACTGCTGGTACAGGTGACCAAGT
ACGATCAGCGGCGAAGGAAACCGGAGGCAACGCGGAGGACGAAGATTCGTACGCCAGTGA
AATCATTCTCACGACTAACAGCGACTGCAGCCTANACG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2432#0      AAGAATCGGCNCGAGGCATGTGAACCATCATCACGTGGGAACCGGTTTGAAGGGGTCCGG 60
consensus_2432#1      ------------------------------------------------------------
                                                                                  

consensus_2432#0      AACTTCGGGTGGGGTAGAGGCCATCGAAACCGGGACTGCGATAGAGCTGCGCCGTAAAAC 120
consensus_2432#1      ------------------------------------------------------------
                                                                                  

consensus_2432#0      GAGAAGTGCAGCTGGACTCGAAGTCACCGTGACTGAGGGACGTCGAAGAAGGATCTCCCG 180
consensus_2432#1      ----------------------------------AAGAATNGCCGAGG---------TNG 17
                                                         **    * *** *           *

consensus_2432#0      AGATAGCAAGTGACCAACAGTTTTGCGCCTCAGCCGCTAGCGACGATAGCAAACGCTATC 240
consensus_2432#1      AGATAGCA-GTGAC-AACAGTTT-GCGCCTCAGCCGCTAGCGACGATGAGCAACGCTATC 74
                      ******** ***** ******** ***********************    *********

consensus_2432#0      GGCATAGGCCAGAAGGTATTATTACCTGTGCCCCGCTGCAACTGTGTTGACTGAGTCATC 300
consensus_2432#1      GGCATAGGCCAGAAGGTATTATTACCTGTGCCC-GCTGCAACTGTGTTGAT--GATCATC 131
                      ********************************* ****************     *****

consensus_2432#0      ATCGTAAACGATTGTCTGACGAGTGTCCATTGCACGGCGGTCAACAATGTTGGGCCAGTT 360
consensus_2432#1      ATCGTAA-CGATTGTCTGACGAGTGTCCATTGCACGGCGGTCAACAATGTTGGGCCAGTT 190
                      ******* ****************************************************

consensus_2432#0      TTCAAGTGGAACTGTTGTGATGGAAGGTGAAAGTGCTGAAACTGAAGACGGGAAGCAGTA 420
consensus_2432#1      T-CAAGTGGAACTGTTGTGATGGAAGGTGAAAGTGCTGAAACTGAAGACGGGAAGCAGTA 249
                      * **********************************************************

consensus_2432#0      CTTTGCTGAGCAGGAATGAAGTGACAGTAGTGGAGTGTAACGATGTTGATCAGAGAGGCG 480
consensus_2432#1      CTTTGCTGAGCAG-AATGAAGTGACAGTAGTGGAGTGTAACGATGTTGATCAGAGAGGC- 307
                      ************* ********************************************* 

consensus_2432#0      ATTGATGCAAGCTGGCACGTCGATGAATCTGTATGGCATGTTGCATAAAGAAGCTGAGGT 540
consensus_2432#1      ATTGATGCAAGCTGGCACGTCGATGAATCTGT-TGGCATGTTGCATAAAGAAGCTGAGGT 366
                      ******************************** ***************************

consensus_2432#0      GCAAAATCTACGCGAAGTGGCGCGGAAAAGAGGCGTAAAAGCAGAGATGACAAAGCCGAA 600
consensus_2432#1      GCAAAATCTACGCGAAGTGGCGCGGAAAAGAGGCGTAAAAGCAGAGATGACAAAGCCAA- 425
                      ********************************************************* * 

consensus_2432#0      GCCCCGTAGCTGCGCCGCCGGTAAAGCGCTGTTGAATGGTGGAGATAATGCGTTTGGCTG 660
consensus_2432#1      --CCCCTAGCTGCGCCGCCGGTAAAGCGCTGTTGAATGGTGGAGATAATGC-TTTGGCTG 482
                        *** ********************************************* ********

consensus_2432#0      CGGGATCC---------------------------------------------------- 668
consensus_2432#1      CGGGATCCGGCACTTTGACGTGTCGTAATGATGATACTGCTGGTACAGGTGACCAAGTAC 542
                      ********                                                    

consensus_2432#0      ------------------------------------------------------------
consensus_2432#1      GATCAGCGGCGAAGGAAACCGGAGGCAACGCGGAGGACGAAGATTCGTACGCCAGTGAAA 602
                                                                                  

consensus_2432#0      ------------------------------------
consensus_2432#1      TCATTCTCACGACTAACAGCGACTGCAGCCTANACG 638