These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2475#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 468 fasta sequence [CGGCACGAGGGTGTAAGGTGAAACTGGTCCATATTTTGGAACGAAACTATTTTGTAATGCTTTTCCGTGCACTACGTGCGTACGTGCCCCGTAAGTGAGTTCGTGCGTGCCGTCGCCGTGTGGTGCAGATAAAACCCGTTTCTTCACGTGAGCTGCGTGAAAAAAAGTGTGTGGCCAAAGGTGTCTCATTAGTCTAGTGTGTGTGTGTGCGTTACCATGTTTATCTTCTGTGCTGATAATCGTACAGCATTCCCGTGATCTTTGTTCACCGTACGGAGGGGAGGGGAAAGGTAGTCTATTCGACGTGTCACAGTAGTGGGTGGCACCGCGACTGCTAGNACACAGACACCCGGATACAATTACAAGTCCACTCTGGCGTCGTGCTGTGTCCGTCGCCTCNCACGGTANGCACAGGCGAGGCAACAGGCAGCAGGGAGCCCGAGATTGCGACTCGGCTTGTCCCTACNG] [+] EMBL BX469687 [CGGCACGAGGGTGTAAGGTGAAACTGGTCCATATTTTGGAACGAAACTATTTTGTAATGCTTTTCCGTGCACTACGTGCGTACGTGCCCCGTAAGTGAGTTCGTGCGTGCCGTCGCCGTGTGGTGCAGATAAAACCCGTTTCTTCACGTGAGCTGCGTGAAAAAAAGTGTGTGGCCAAAGGTGTCTCATTAGTCTAGTGTGTGTGTGTGCGTTACCATGTTTATCTTCTGTGCTGATAATCGTACAGCATTCCCGTGATCTTTGTTCACCGTACGGAGGGGAGGGGAAAGGTAGTCTATTCGACGTGTCACAGTAGTGGGTGGCACCGCGACTGCTAGNACACAGACACCCGGATACAATTACAAGTCCACTCTGGCGTCGTGCTGTGTCCGTCGCCTCNCACGGTANGCACAGGCGAGGCAACAGGCAGCAGGGAGCCCGAGATTGCGACTCGGCTTGTCCCTACNG] consensusID : consensus_2475#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 286 fasta sequence [CCGGTGCGTGTTGTGTTGGTGAAACTGGTCCATATTTTGGAACGAAACTATTTTGTAATGCTTTTCCGTGCACTTCTTGCGTACGTGCCCCGTAAGTGAGTTCGTGCGTGCCGTCGCCGTGTGGTGCAGATAAAACCCGTTTCTTCACGTGAGCTGCGTGAAAAAAAGTGTGTGGCCAAAGGTGTCTCATTAATCTGTGTGTGTGTGTGTGCGTTACCATGTTTATCTTCTGTGCTGATAATCGTACAGCATTCCCGTGATCTTTGTTCACCGTACGGAGGGGAGG] [+] EMBL BM595746 [CCGGTGCGTGTTGTGTTGGTGAAACTGGTCCATATTTTGGAACGAAACTATTTTGTAATGCTTTTCCGTGCACTTCTTGCGTACGTGCCCCGTAAGTGAGTTCGTGCGTGCCGTCGCCGTGTGGTGCAGATAAAACCCGTTTCTTCACGTGAGCTGCGTGAAAAAAAGTGTGTGGCCAAAGGTGTCTCATTAATCTGTGTGTGTGTGTGTGCGTTACCATGTTTATCTTCTGTGCTGATAATCGTACAGCATTCCCGTGATCTTTGTTCACCGTACGGAGGGGAGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2475#0 -CGGCACGAGG-GTGTAAGGTGAAACTGGTCCATATTTTGGAACGAAACTATTTTGTAAT 58 consensus_2475#1 CCGGTGCGTGTTGTGTT-GGTGAAACTGGTCCATATTTTGGAACGAAACTATTTTGTAAT 59 *** ** * **** ****************************************** consensus_2475#0 GCTTTTCCGTGCACTACGTGCGTACGTGCCCCGTAAGTGAGTTCGTGCGTGCCGTCGCCG 118 consensus_2475#1 GCTTTTCCGTGCACTTCTTGCGTACGTGCCCCGTAAGTGAGTTCGTGCGTGCCGTCGCCG 119 *************** * ****************************************** consensus_2475#0 TGTGGTGCAGATAAAACCCGTTTCTTCACGTGAGCTGCGTGAAAAAAAGTGTGTGGCCAA 178 consensus_2475#1 TGTGGTGCAGATAAAACCCGTTTCTTCACGTGAGCTGCGTGAAAAAAAGTGTGTGGCCAA 179 ************************************************************ consensus_2475#0 AGGTGTCTCATTAGTCTA-GTGTGTGTGTGTGCGTTACCATGTTTATCTTCTGTGCTGAT 237 consensus_2475#1 AGGTGTCTCATTAATCTGTGTGTGTGTGTGTGCGTTACCATGTTTATCTTCTGTGCTGAT 239 ************* *** ***************************************** consensus_2475#0 AATCGTACAGCATTCCCGTGATCTTTGTTCACCGTACGGAGGGGAGGGGAAAGGTAGTCT 297 consensus_2475#1 AATCGTACAGCATTCCCGTGATCTTTGTTCACCGTACGGAGGGGAGG------------- 286 *********************************************** consensus_2475#0 ATTCGACGTGTCACAGTAGTGGGTGGCACCGCGACTGCTAGNACACAGACACCCGGATAC 357 consensus_2475#1 ------------------------------------------------------------ consensus_2475#0 AATTACAAGTCCACTCTGGCGTCGTGCTGTGTCCGTCGCCTCNCACGGTANGCACAGGCG 417 consensus_2475#1 ------------------------------------------------------------ consensus_2475#0 AGGCAACAGGCAGCAGGGAGCCCGAGATTGCGACTCGGCTTGTCCCTACNG 468 consensus_2475#1 --------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||