cluster # 2586

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Anopheles gambiae
cluster # 2586 cluster # 2586 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2586#0 length = 693 sequences # 1

consensus_2586#1 length = 656 sequences # 1

consensusID : consensus_2586#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 693
fasta sequence

                              [TCGCGTTCTTCCTTAGCTCGTACGTGGTCCCGCTCATACTGATCAGCGTCCTGTACATGTGGATGTTGTCCCGGCTGTGGCGAAGTTCGGTCGGCGGTCGTTCGGCCGAATCGAAGAAGGGCAAAAAGCGCGTTACCCGGCTGGTGGTGATTGTGGTGGCAGCGTTTGCTTCATTATGGTTTCCCATACAGGTCATCCTGGTGCTAAAGAGTGTGGACGTCTTTAAACCAGACACGCATTTTAAAATTTCACTACAAATCGTCTCGCACGTGCTGGCATACACGAGCTCCTGTATAAACCCGCTGCTGTACGCGTTCCTGTCCGAAAACTTTCGGAAAGCATTCCGTAAGATTGTTTACTGTGGACCGGGGAGCCGTCGCCAGGGCAGCCAGCGACATATGCCACTGCCAACGAAAACGACGCGAACCGGCAGCTGTCCAGACATTTTATAACCGGAAACAATGGAGGAAACGTCCGTCACCTTCGTTTAATACACTCTTTGTTTTTGCACAGTGCAGCCCAGAGTCTCCTTGTTATCCTGTCCTCGACAGATCATCAGCACAGCGGCACAAGCTTCTACGAAACGTTTCACTCCAAGGGCTTAACAGTGCTGCATACCGAACCAACCAATCGTTATCATGATCACTCTCATCATCATCTTTATTATGAGTGGTAGTAATTAACAGATCGTTT]

[+] EMBL BX620556             [TCGCGTTCTTCCTTAGCTCGTACGTGGTCCCGCTCATACTGATCAGCGTCCTGTACATGTGGATGTTGTCCCGGCTGTGGCGAAGTTCGGTCGGCGGTCGTTCGGCCGAATCGAAGAAGGGCAAAAAGCGCGTTACCCGGCTGGTGGTGATTGTGGTGGCAGCGTTTGCTTCATTATGGTTTCCCATACAGGTCATCCTGGTGCTAAAGAGTGTGGACGTCTTTAAACCAGACACGCATTTTAAAATTTCACTACAAATCGTCTCGCACGTGCTGGCATACACGAGCTCCTGTATAAACCCGCTGCTGTACGCGTTCCTGTCCGAAAACTTTCGGAAAGCATTCCGTAAGATTGTTTACTGTGGACCGGGGAGCCGTCGCCAGGGCAGCCAGCGACATATGCCACTGCCAACGAAAACGACGCGAACCGGCAGCTGTCCAGACATTTTATAACCGGAAACAATGGAGGAAACGTCCGTCACCTTCGTTTAATACACTCTTTGTTTTTGCACAGTGCAGCCCAGAGTCTCCTTGTTATCCTGTCCTCGACAGATCATCAGCACAGCGGCACAAGCTTCTACGAAACGTTTCACTCCAAGGGCTTAACAGTGCTGCATACCGAACCAACCAATCGTTATCATGATCACTCTCATCATCATCTTTATTATGAGTGGTAGTAATTAACAGATCGTTT]




>consensus_2586#0
TCGCGTTCTTCCTTAGCTCGTACGTGGTCCCGCTCATACTGATCAGCGTCCTGTACATGT
GGATGTTGTCCCGGCTGTGGCGAAGTTCGGTCGGCGGTCGTTCGGCCGAATCGAAGAAGG
GCAAAAAGCGCGTTACCCGGCTGGTGGTGATTGTGGTGGCAGCGTTTGCTTCATTATGGT
TTCCCATACAGGTCATCCTGGTGCTAAAGAGTGTGGACGTCTTTAAACCAGACACGCATT
TTAAAATTTCACTACAAATCGTCTCGCACGTGCTGGCATACACGAGCTCCTGTATAAACC
CGCTGCTGTACGCGTTCCTGTCCGAAAACTTTCGGAAAGCATTCCGTAAGATTGTTTACT
GTGGACCGGGGAGCCGTCGCCAGGGCAGCCAGCGACATATGCCACTGCCAACGAAAACGA
CGCGAACCGGCAGCTGTCCAGACATTTTATAACCGGAAACAATGGAGGAAACGTCCGTCA
CCTTCGTTTAATACACTCTTTGTTTTTGCACAGTGCAGCCCAGAGTCTCCTTGTTATCCT
GTCCTCGACAGATCATCAGCACAGCGGCACAAGCTTCTACGAAACGTTTCACTCCAAGGG
CTTAACAGTGCTGCATACCGAACCAACCAATCGTTATCATGATCACTCTCATCATCATCT
TTATTATGAGTGGTAGTAATTAACAGATCGTTT

consensusID : consensus_2586#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 656
fasta sequence

                              [ATGGGAAGACAACTTCTCTGTTTGACTTTCTTTTCATTAATTTTCTCTCATTCTATTTCATGTTTTCAGGTCATCCTGGTCCTAAAGAGTGTGGACGTCTTTAAACCAGACACGCATTTTAAAATTTCACTACAAATCGTCTCGCACGTGCTGGCATACACGAGCTCCTGTATAAACCCGCTGCTGTACGCGTTCCTGTCCGAAAACTTTCGGAAAGCATTCCGTAAGATTGTTTACTGTGGACCGAGGAGCCGTCGCCAGGGCAGCCAGCGACATATGCCACTGCCAACGAAAACGACGCGAACCGGCAGCTGTCCAGACATTTTATAACCGGAAACAATGGAGGAAACGTCCGTCACCTTCGTTTAATACACTCTTTGTTTTCGCACAGTGCAGCCCAGTGTATCCGTTTTATCCTGTCCTCGACAGATCATCAGCACAGCGGCACAAGCTTCTACGAAACGTTTCACTCCAAGGGCTTAACAGTGATGCATACCGAACCAACCAATCGTTATCATGATCACTCTCATCATCATCTTTATTATGAGTGGTAGTAATTAACAGATCGTGTGGTACCGTATGGTGCGTTTATCATAATGGACAATGTCCTACTTTATTAAATTTCATCTACGTTATATGAGGGTGCGCTTGATCGT]

[+] EMBL BX622376             [ATGGGAAGACAACTTCTCTGTTTGACTTTCTTTTCATTAATTTTCTCTCATTCTATTTCATGTTTTCAGGTCATCCTGGTCCTAAAGAGTGTGGACGTCTTTAAACCAGACACGCATTTTAAAATTTCACTACAAATCGTCTCGCACGTGCTGGCATACACGAGCTCCTGTATAAACCCGCTGCTGTACGCGTTCCTGTCCGAAAACTTTCGGAAAGCATTCCGTAAGATTGTTTACTGTGGACCGAGGAGCCGTCGCCAGGGCAGCCAGCGACATATGCCACTGCCAACGAAAACGACGCGAACCGGCAGCTGTCCAGACATTTTATAACCGGAAACAATGGAGGAAACGTCCGTCACCTTCGTTTAATACACTCTTTGTTTTCGCACAGTGCAGCCCAGTGTATCCGTTTTATCCTGTCCTCGACAGATCATCAGCACAGCGGCACAAGCTTCTACGAAACGTTTCACTCCAAGGGCTTAACAGTGATGCATACCGAACCAACCAATCGTTATCATGATCACTCTCATCATCATCTTTATTATGAGTGGTAGTAATTAACAGATCGTGTGGTACCGTATGGTGCGTTTATCATAATGGACAATGTCCTACTTTATTAAATTTCATCTACGTTATATGAGGGTGCGCTTGATCGT]




>consensus_2586#1
ATGGGAAGACAACTTCTCTGTTTGACTTTCTTTTCATTAATTTTCTCTCATTCTATTTCA
TGTTTTCAGGTCATCCTGGTCCTAAAGAGTGTGGACGTCTTTAAACCAGACACGCATTTT
AAAATTTCACTACAAATCGTCTCGCACGTGCTGGCATACACGAGCTCCTGTATAAACCCG
CTGCTGTACGCGTTCCTGTCCGAAAACTTTCGGAAAGCATTCCGTAAGATTGTTTACTGT
GGACCGAGGAGCCGTCGCCAGGGCAGCCAGCGACATATGCCACTGCCAACGAAAACGACG
CGAACCGGCAGCTGTCCAGACATTTTATAACCGGAAACAATGGAGGAAACGTCCGTCACC
TTCGTTTAATACACTCTTTGTTTTCGCACAGTGCAGCCCAGTGTATCCGTTTTATCCTGT
CCTCGACAGATCATCAGCACAGCGGCACAAGCTTCTACGAAACGTTTCACTCCAAGGGCT
TAACAGTGATGCATACCGAACCAACCAATCGTTATCATGATCACTCTCATCATCATCTTT
ATTATGAGTGGTAGTAATTAACAGATCGTGTGGTACCGTATGGTGCGTTTATCATAATGG
ACAATGTCCTACTTTATTAAATTTCATCTACGTTATATGAGGGTGCGCTTGATCGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2586#0      TCGCGTTCTTCCTTAGCTCGTACGTGGTCCCGCTCATACTGATCAGCGTCCTGTACATGT 60
consensus_2586#1      ------------------------------------------------------------
                                                                                  

consensus_2586#0      GGATGTTGTCCCGGCTGTGGCGAAGTTCGGTCGGCGGTCGTTCGGCCGAATCGAAGAAGG 120
consensus_2586#1      --------------------------------------------------------ATGG 4
                                                                              * **

consensus_2586#0      GCAAAAAGCGCGTTACCCGGCTGGTGGTGATTGTGGTGGCAGCGTTTGCTTCATTATGGT 180
consensus_2586#1      GAAGACAAC---TTCTCTGTTTGACTTTCTTTTCATTAAT----TTTCTCTCATTCTATT 57
                      * * * * *   **  * *  **    *  **    *       ***   ***** *  *

consensus_2586#0      TTCC-CATACAGGTCATCCTGGTGCTAAAGAGTGTGGACGTCTTTAAACCAGACACGCAT 239
consensus_2586#1      TCATGTTTTCAGGTCATCCTGGTCCTAAAGAGTGTGGACGTCTTTAAACCAGACACGCAT 117
                      *      * ************** ************************************

consensus_2586#0      TTTAAAATTTCACTACAAATCGTCTCGCACGTGCTGGCATACACGAGCTCCTGTATAAAC 299
consensus_2586#1      TTTAAAATTTCACTACAAATCGTCTCGCACGTGCTGGCATACACGAGCTCCTGTATAAAC 177
                      ************************************************************

consensus_2586#0      CCGCTGCTGTACGCGTTCCTGTCCGAAAACTTTCGGAAAGCATTCCGTAAGATTGTTTAC 359
consensus_2586#1      CCGCTGCTGTACGCGTTCCTGTCCGAAAACTTTCGGAAAGCATTCCGTAAGATTGTTTAC 237
                      ************************************************************

consensus_2586#0      TGTGGACCGGGGAGCCGTCGCCAGGGCAGCCAGCGACATATGCCACTGCCAACGAAAACG 419
consensus_2586#1      TGTGGACCGAGGAGCCGTCGCCAGGGCAGCCAGCGACATATGCCACTGCCAACGAAAACG 297
                      ********* **************************************************

consensus_2586#0      ACGCGAACCGGCAGCTGTCCAGACATTTTATAACCGGAAACAATGGAGGAAACGTCCGTC 479
consensus_2586#1      ACGCGAACCGGCAGCTGTCCAGACATTTTATAACCGGAAACAATGGAGGAAACGTCCGTC 357
                      ************************************************************

consensus_2586#0      ACCTTCGTTTAATACACTCTTTGTTTTTGCACAGTGCAGCCCAGAGTCTCCTTGTTATCC 539
consensus_2586#1      ACCTTCGTTTAATACACTCTTTGTTTTCGCACAGTGCAGCCCAGTGTATCCGTTTTATCC 417
                      *************************** **************** ** *** * ******

consensus_2586#0      TGTCCTCGACAGATCATCAGCACAGCGGCACAAGCTTCTACGAAACGTTTCACTCCAAGG 599
consensus_2586#1      TGTCCTCGACAGATCATCAGCACAGCGGCACAAGCTTCTACGAAACGTTTCACTCCAAGG 477
                      ************************************************************

consensus_2586#0      GCTTAACAGTGCTGCATACCGAACCAACCAATCGTTATCATGATCACTCTCATCATCATC 659
consensus_2586#1      GCTTAACAGTGATGCATACCGAACCAACCAATCGTTATCATGATCACTCTCATCATCATC 537
                      *********** ************************************************

consensus_2586#0      TTTATTATGAGTGGTAGTAATTAACAGATCGTTT-------------------------- 693
consensus_2586#1      TTTATTATGAGTGGTAGTAATTAACAGATCGTGTGGTACCGTATGGTGCGTTTATCATAA 597
                      ******************************** *                          

consensus_2586#0      -----------------------------------------------------------
consensus_2586#1      TGGACAATGTCCTACTTTATTAAATTTCATCTACGTTATATGAGGGTGCGCTTGATCGT 656