cluster # 2595

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 2595 cluster # 2595 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2595#0 length = 667 sequences # 1

consensus_2595#1 length = 658 sequences # 1

consensusID : consensus_2595#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 667
fasta sequence

                              [GGCAAGAATCGGCACGATGGGTGCAGTCTACTTCCTTGTGCTGTTTGTGGAATCGTAACAAACAACAAAACACACATTTCAAAATGAAGTTCTTCGTGTTCGTCGCTTCGCTCAGTGCAGCAGTGGCTATGTTCGGAGCGCATGGTGCCGTCGTTCCAGTGGCACCGGCCGTAGCCGTTAGCACCAACTACGATCCACTGCCGCAGTACACCTATGCGTACAACGTGCAGGACGCTCTGACGGGCGATAGCAAAAGCCAGCAAGAGACGCGAGATGGCGACATCGTACGAGGCTCCTACTCGCTGGTCGAACCAGACGGCACGCTGCGTACGGTCTTCTACACTGCCGATCCCGTCAATGGGTTCAATGCCGTCGTACAGCGTGGCCCGCTCGTACCGAAGGCAGTCGTGCCGGTAGCGGCCGGTCCGGCCATCCTTGCACCGGCTCCCGTGGCCCGAGTGTTAGGCTAAGCGTTCCAGTAAGATGAACGTCTAATGTAGGATAAGTTTAGCTCGATTTGCGTTAGCCATCGTTGTTATGTTGTAGTTGTGTATAGACTGAAATAAAGATAAACGTACCCAATGTTATTACCAGCAAAAGTAGCCATGCAGAATGGTATGTTGGTTTATCTCTAAAAAAACACAAACAAAAACAAACAACAAAAACA]

[+] EMBL BX467986             [GGCAAGAATCGGCACGATGGGTGCAGTCTACTTCCTTGTGCTGTTTGTGGAATCGTAACAAACAACAAAACACACATTTCAAAATGAAGTTCTTCGTGTTCGTCGCTTCGCTCAGTGCAGCAGTGGCTATGTTCGGAGCGCATGGTGCCGTCGTTCCAGTGGCACCGGCCGTAGCCGTTAGCACCAACTACGATCCACTGCCGCAGTACACCTATGCGTACAACGTGCAGGACGCTCTGACGGGCGATAGCAAAAGCCAGCAAGAGACGCGAGATGGCGACATCGTACGAGGCTCCTACTCGCTGGTCGAACCAGACGGCACGCTGCGTACGGTCTTCTACACTGCCGATCCCGTCAATGGGTTCAATGCCGTCGTACAGCGTGGCCCGCTCGTACCGAAGGCAGTCGTGCCGGTAGCGGCCGGTCCGGCCATCCTTGCACCGGCTCCCGTGGCCCGAGTGTTAGGCTAAGCGTTCCAGTAAGATGAACGTCTAATGTAGGATAAGTTTAGCTCGATTTGCGTTAGCCATCGTTGTTATGTTGTAGTTGTGTATAGACTGAAATAAAGATAAACGTACCCAATGTTATTACCAGCAAAAGTAGCCATGCAGAATGGTATGTTGGTTTATCTCTAAAAAAACACAAACAAAAACAAACAACAAAAACA]




>consensus_2595#0
GGCAAGAATCGGCACGATGGGTGCAGTCTACTTCCTTGTGCTGTTTGTGGAATCGTAACA
AACAACAAAACACACATTTCAAAATGAAGTTCTTCGTGTTCGTCGCTTCGCTCAGTGCAG
CAGTGGCTATGTTCGGAGCGCATGGTGCCGTCGTTCCAGTGGCACCGGCCGTAGCCGTTA
GCACCAACTACGATCCACTGCCGCAGTACACCTATGCGTACAACGTGCAGGACGCTCTGA
CGGGCGATAGCAAAAGCCAGCAAGAGACGCGAGATGGCGACATCGTACGAGGCTCCTACT
CGCTGGTCGAACCAGACGGCACGCTGCGTACGGTCTTCTACACTGCCGATCCCGTCAATG
GGTTCAATGCCGTCGTACAGCGTGGCCCGCTCGTACCGAAGGCAGTCGTGCCGGTAGCGG
CCGGTCCGGCCATCCTTGCACCGGCTCCCGTGGCCCGAGTGTTAGGCTAAGCGTTCCAGT
AAGATGAACGTCTAATGTAGGATAAGTTTAGCTCGATTTGCGTTAGCCATCGTTGTTATG
TTGTAGTTGTGTATAGACTGAAATAAAGATAAACGTACCCAATGTTATTACCAGCAAAAG
TAGCCATGCAGAATGGTATGTTGGTTTATCTCTAAAAAAACACAAACAAAAACAAACAAC
AAAAACA

consensusID : consensus_2595#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 658
fasta sequence

                              [CCGGTGGCAAGTGCGAAGAGAACACGCATTTAACTTCCGTTCAATTCTGACAACCGAAACTTGTTGCTTGCTTGCAGTTCTTCGTGTTCGTCGCTTCGCTCAGTGCAGCAGTGGCTATGTTCGGAGCGCATGGTGCCGTCGTTCCAGTGGCACCGGCCGTAGCCGTTAGCACCAACTACGATCCACTGCCGCAGTACACCTATGCGTACAACGTGCAGGACGCTCTGACGGGCGATAGCAAAAGCCAGCAAGAGACGCGAGATGGCGACATCGTACGAGGCTCCTACTCGCTGGTCGAACCAGACGGCACGCTGCGTACGGTCTTCTACACTGCCGATCCCGTCAATGGGTTCAATGCCGTCGTACAGCGTGGCCCGCTCGTACCGAAGGCAGTCGTGCCGGTAGCGGCCGGTCCGGCCATCCTTGCACCGGCTCCCGTGGCCCGAGTGTTAGGCTAAGCGTTCCAGTAAGATGAACGTCTAATGTAGGATAATTTAGCTCGATTTGCGTTAGCCATCGTTGTTTGTTGTGTTGTGTATAGACTGAAATAAAATAAACGTACCCAATGTTATTACCAGCAAAAGTAGCCATGCAGAATGGTATGTTGGTTTATCTCTAAACATTTACGTCGGCAATTTGCCATGCTCTCAAGGTTGTC]

[+] EMBL BM637387             [CCGGTGGCAAGTGCGAAGAGAACACGCATTTAACTTCCGTTCAATTCTGACAACCGAAACTTGTTGCTTGCTTGCAGTTCTTCGTGTTCGTCGCTTCGCTCAGTGCAGCAGTGGCTATGTTCGGAGCGCATGGTGCCGTCGTTCCAGTGGCACCGGCCGTAGCCGTTAGCACCAACTACGATCCACTGCCGCAGTACACCTATGCGTACAACGTGCAGGACGCTCTGACGGGCGATAGCAAAAGCCAGCAAGAGACGCGAGATGGCGACATCGTACGAGGCTCCTACTCGCTGGTCGAACCAGACGGCACGCTGCGTACGGTCTTCTACACTGCCGATCCCGTCAATGGGTTCAATGCCGTCGTACAGCGTGGCCCGCTCGTACCGAAGGCAGTCGTGCCGGTAGCGGCCGGTCCGGCCATCCTTGCACCGGCTCCCGTGGCCCGAGTGTTAGGCTAAGCGTTCCAGTAAGATGAACGTCTAATGTAGGATAATTTAGCTCGATTTGCGTTAGCCATCGTTGTTTGTTGTGTTGTGTATAGACTGAAATAAAATAAACGTACCCAATGTTATTACCAGCAAAAGTAGCCATGCAGAATGGTATGTTGGTTTATCTCTAAACATTTACGTCGGCAATTTGCCATGCTCTCAAGGTTGTC]




>consensus_2595#1
CCGGTGGCAAGTGCGAAGAGAACACGCATTTAACTTCCGTTCAATTCTGACAACCGAAAC
TTGTTGCTTGCTTGCAGTTCTTCGTGTTCGTCGCTTCGCTCAGTGCAGCAGTGGCTATGT
TCGGAGCGCATGGTGCCGTCGTTCCAGTGGCACCGGCCGTAGCCGTTAGCACCAACTACG
ATCCACTGCCGCAGTACACCTATGCGTACAACGTGCAGGACGCTCTGACGGGCGATAGCA
AAAGCCAGCAAGAGACGCGAGATGGCGACATCGTACGAGGCTCCTACTCGCTGGTCGAAC
CAGACGGCACGCTGCGTACGGTCTTCTACACTGCCGATCCCGTCAATGGGTTCAATGCCG
TCGTACAGCGTGGCCCGCTCGTACCGAAGGCAGTCGTGCCGGTAGCGGCCGGTCCGGCCA
TCCTTGCACCGGCTCCCGTGGCCCGAGTGTTAGGCTAAGCGTTCCAGTAAGATGAACGTC
TAATGTAGGATAATTTAGCTCGATTTGCGTTAGCCATCGTTGTTTGTTGTGTTGTGTATA
GACTGAAATAAAATAAACGTACCCAATGTTATTACCAGCAAAAGTAGCCATGCAGAATGG
TATGTTGGTTTATCTCTAAACATTTACGTCGGCAATTTGCCATGCTCTCAAGGTTGTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2595#0      GGCAAGAATCGGCACGATGGGTGCAGTCTACTTCCTTGTGCTGTTTGTGGAATCGTAACA 60
consensus_2595#1      --------CCGGTGGCAAGTGCGAAGAGAACACGCATTTAACTTCCGTTCAATTCTGACA 52
                               ***    * * * * **   **   * * *    *  **  ***  * ***

consensus_2595#0      AACAACAAAACACACATTTCAAAATGAAGTTCTTCGTGTTCGTCGCTTCGCTCAGTGCAG 120
consensus_2595#1      ACCG---AAACTTGTTGCTTGCT-TGCAGTTCTTCGTGTTCGTCGCTTCGCTCAGTGCAG 108
                      * *    ****       *     ** *********************************

consensus_2595#0      CAGTGGCTATGTTCGGAGCGCATGGTGCCGTCGTTCCAGTGGCACCGGCCGTAGCCGTTA 180
consensus_2595#1      CAGTGGCTATGTTCGGAGCGCATGGTGCCGTCGTTCCAGTGGCACCGGCCGTAGCCGTTA 168
                      ************************************************************

consensus_2595#0      GCACCAACTACGATCCACTGCCGCAGTACACCTATGCGTACAACGTGCAGGACGCTCTGA 240
consensus_2595#1      GCACCAACTACGATCCACTGCCGCAGTACACCTATGCGTACAACGTGCAGGACGCTCTGA 228
                      ************************************************************

consensus_2595#0      CGGGCGATAGCAAAAGCCAGCAAGAGACGCGAGATGGCGACATCGTACGAGGCTCCTACT 300
consensus_2595#1      CGGGCGATAGCAAAAGCCAGCAAGAGACGCGAGATGGCGACATCGTACGAGGCTCCTACT 288
                      ************************************************************

consensus_2595#0      CGCTGGTCGAACCAGACGGCACGCTGCGTACGGTCTTCTACACTGCCGATCCCGTCAATG 360
consensus_2595#1      CGCTGGTCGAACCAGACGGCACGCTGCGTACGGTCTTCTACACTGCCGATCCCGTCAATG 348
                      ************************************************************

consensus_2595#0      GGTTCAATGCCGTCGTACAGCGTGGCCCGCTCGTACCGAAGGCAGTCGTGCCGGTAGCGG 420
consensus_2595#1      GGTTCAATGCCGTCGTACAGCGTGGCCCGCTCGTACCGAAGGCAGTCGTGCCGGTAGCGG 408
                      ************************************************************

consensus_2595#0      CCGGTCCGGCCATCCTTGCACCGGCTCCCGTGGCCCGAGTGTTAGGCTAAGCGTTCCAGT 480
consensus_2595#1      CCGGTCCGGCCATCCTTGCACCGGCTCCCGTGGCCCGAGTGTTAGGCTAAGCGTTCCAGT 468
                      ************************************************************

consensus_2595#0      AAGATGAACGTCTAATGTAGGATAAGTTTAGCTCGATTTGCGTTAGCCATCGTTGTTATG 540
consensus_2595#1      AAGATGAACGTCTAATGTAGGATAA-TTTAGCTCGATTTGCGTTAGCCATCGTTGTT-TG 526
                      ************************* ******************************* **

consensus_2595#0      TTGTAGTTGTGTATAGACTGAAATAAAGATAAACGTACCCAATGTTATTACCAGCAAAAG 600
consensus_2595#1      TTGT-GTTGTGTATAGACTGAAATAAA-ATAAACGTACCCAATGTTATTACCAGCAAAAG 584
                      **** ********************** ********************************

consensus_2595#0      TAGCCATGCAGAATGGTATGTTGGTTTATCTCTAAAAAAACACAAACAAAAACAAACAAC 660
consensus_2595#1      TAGCCATGCAGAATGGTATGTTGGTTTATCTCTAAACATTTACGT-CGGCAATTTGCCAT 643
                      ************************************ *   **   *   **    * * 

consensus_2595#0      AAAAACA-------- 667
consensus_2595#1      GCTCTCAAGGTTGTC 658
                           **