cluster # 2599

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Anopheles gambiae
cluster # 2599 cluster # 2599 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2599#0 length = 671 sequences # 1

consensus_2599#1 length = 644 sequences # 1

consensusID : consensus_2599#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 671
fasta sequence

                              [CCGCTGAAATCAAAACAAAGCAAAAAACCTCCACTCGTACGAGGAACACAAATGAAACGCTAATTTTAGCTAAGCTTACACCTTTTTGCAATAATTGTGACTAAATAGCAATAACACCATAAAGCGTTCAAAATTATCTTAAGTTAGCAACACACAAAAGATAAAACAAACCTCTCTACATTACACATCACATGGCTGTTGAACAAAGCGAAAGTGCCTAAAGATCATTCCAATACGACATTCTTCTAGAATTAACGAAACAAAGAGCAATTTAGTGTGGCCTTACCGAAATGTTCCGAACGCTAGGCGCCACCGTTCTGTTGCTGAAAATAAGCCTCACGATTGCGTATCGGCCTGTGTTCATCTACCATGGCATTCTTACTGGTGCGGATAGTATGGGGCATTTGGTCAATAGAATCCAGGAGGTTCACCCTGGCACGGTGGTGTACAATTTTGGACGTTTCGGCGGATGGGCCAGTCTGATAAATGCCTGGCATCAGGTGCAAGCGGCACACGACAACCTGAAATTAGTCTGCGATTTGCATCCGGACGAGGGCATCAACATGATCGGCTATTTCGCAGGGTGGTCTGCTGGGTCGGGCAGTGCTGCAGATCTATCCGGACCACTGGGGTGAAGACGTTCATCTCACTAAGCTCCCCGCAAGCGGGTC]

[+] EMBL BM577081             [CCGCTGAAATCAAAACAAAGCAAAAAACCTCCACTCGTACGAGGAACACAAATGAAACGCTAATTTTAGCTAAGCTTACACCTTTTTGCAATAATTGTGACTAAATAGCAATAACACCATAAAGCGTTCAAAATTATCTTAAGTTAGCAACACACAAAAGATAAAACAAACCTCTCTACATTACACATCACATGGCTGTTGAACAAAGCGAAAGTGCCTAAAGATCATTCCAATACGACATTCTTCTAGAATTAACGAAACAAAGAGCAATTTAGTGTGGCCTTACCGAAATGTTCCGAACGCTAGGCGCCACCGTTCTGTTGCTGAAAATAAGCCTCACGATTGCGTATCGGCCTGTGTTCATCTACCATGGCATTCTTACTGGTGCGGATAGTATGGGGCATTTGGTCAATAGAATCCAGGAGGTTCACCCTGGCACGGTGGTGTACAATTTTGGACGTTTCGGCGGATGGGCCAGTCTGATAAATGCCTGGCATCAGGTGCAAGCGGCACACGACAACCTGAAATTAGTCTGCGATTTGCATCCGGACGAGGGCATCAACATGATCGGCTATTTCGCAGGGTGGTCTGCTGGGTCGGGCAGTGCTGCAGATCTATCCGGACCACTGGGGTGAAGACGTTCATCTCACTAAGCTCCCCGCAAGCGGGTC]




>consensus_2599#0
CCGCTGAAATCAAAACAAAGCAAAAAACCTCCACTCGTACGAGGAACACAAATGAAACGC
TAATTTTAGCTAAGCTTACACCTTTTTGCAATAATTGTGACTAAATAGCAATAACACCAT
AAAGCGTTCAAAATTATCTTAAGTTAGCAACACACAAAAGATAAAACAAACCTCTCTACA
TTACACATCACATGGCTGTTGAACAAAGCGAAAGTGCCTAAAGATCATTCCAATACGACA
TTCTTCTAGAATTAACGAAACAAAGAGCAATTTAGTGTGGCCTTACCGAAATGTTCCGAA
CGCTAGGCGCCACCGTTCTGTTGCTGAAAATAAGCCTCACGATTGCGTATCGGCCTGTGT
TCATCTACCATGGCATTCTTACTGGTGCGGATAGTATGGGGCATTTGGTCAATAGAATCC
AGGAGGTTCACCCTGGCACGGTGGTGTACAATTTTGGACGTTTCGGCGGATGGGCCAGTC
TGATAAATGCCTGGCATCAGGTGCAAGCGGCACACGACAACCTGAAATTAGTCTGCGATT
TGCATCCGGACGAGGGCATCAACATGATCGGCTATTTCGCAGGGTGGTCTGCTGGGTCGG
GCAGTGCTGCAGATCTATCCGGACCACTGGGGTGAAGACGTTCATCTCACTAAGCTCCCC
GCAAGCGGGTC

consensusID : consensus_2599#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 644
fasta sequence

                              [CCGCCCACGCGTCCGCGTACGAGGAACACAAATGAAACGCTAATTTTAGCTAAGCTTACACCTTTTTGCAATAATTGTGACTAAATAGCAATAACACCATAAAGCGTTCAAAATTATCTTAAGTTAGCAACACACAAAAGATAAAACAAACCTCTCTACATTACACATCACATGGCTGTTGAACAAAGCGAAAGTGCCTAAAGATCATTCCAATACGACATTCTTCTAGAATTAACGAAACAAAGAGCAATTTAGTGTGGCCTTACCGAAATGTTCCGAACGCTAGGCGCCACCGTTCTGTTGCTGAAAATAAGCCTCACGATTGCGTATCGGCCTGTGTTCATCTACCATGGCATTCTTACTGGTGCGGATAGTATGGGGCATTTGGTCAATAGAATCCAGGAGGTTCACCCTGGCACGGTGGTGTACAATTTTGGACGTTTCGGCGGATGGGCCAGTCTGATAAATGCCTGGCATCAGGTGCAAGCGGCACACGACAACCTGAAATTAGTCTGCGATTTGCATCCGGACGAGGGCATCAACATGATCGGCTATTCGCAGGGTGGTCTGCTGGGTCGGGCAGTGCTGCAGATCTATCCGGACCACTGTGTGAAGACGTTCATCTCACTAAGCTCCCCGCAAGC]

[+] EMBL BM603131             [CCGCCCACGCGTCCGCGTACGAGGAACACAAATGAAACGCTAATTTTAGCTAAGCTTACACCTTTTTGCAATAATTGTGACTAAATAGCAATAACACCATAAAGCGTTCAAAATTATCTTAAGTTAGCAACACACAAAAGATAAAACAAACCTCTCTACATTACACATCACATGGCTGTTGAACAAAGCGAAAGTGCCTAAAGATCATTCCAATACGACATTCTTCTAGAATTAACGAAACAAAGAGCAATTTAGTGTGGCCTTACCGAAATGTTCCGAACGCTAGGCGCCACCGTTCTGTTGCTGAAAATAAGCCTCACGATTGCGTATCGGCCTGTGTTCATCTACCATGGCATTCTTACTGGTGCGGATAGTATGGGGCATTTGGTCAATAGAATCCAGGAGGTTCACCCTGGCACGGTGGTGTACAATTTTGGACGTTTCGGCGGATGGGCCAGTCTGATAAATGCCTGGCATCAGGTGCAAGCGGCACACGACAACCTGAAATTAGTCTGCGATTTGCATCCGGACGAGGGCATCAACATGATCGGCTATTCGCAGGGTGGTCTGCTGGGTCGGGCAGTGCTGCAGATCTATCCGGACCACTGTGTGAAGACGTTCATCTCACTAAGCTCCCCGCAAGC]




>consensus_2599#1
CCGCCCACGCGTCCGCGTACGAGGAACACAAATGAAACGCTAATTTTAGCTAAGCTTACA
CCTTTTTGCAATAATTGTGACTAAATAGCAATAACACCATAAAGCGTTCAAAATTATCTT
AAGTTAGCAACACACAAAAGATAAAACAAACCTCTCTACATTACACATCACATGGCTGTT
GAACAAAGCGAAAGTGCCTAAAGATCATTCCAATACGACATTCTTCTAGAATTAACGAAA
CAAAGAGCAATTTAGTGTGGCCTTACCGAAATGTTCCGAACGCTAGGCGCCACCGTTCTG
TTGCTGAAAATAAGCCTCACGATTGCGTATCGGCCTGTGTTCATCTACCATGGCATTCTT
ACTGGTGCGGATAGTATGGGGCATTTGGTCAATAGAATCCAGGAGGTTCACCCTGGCACG
GTGGTGTACAATTTTGGACGTTTCGGCGGATGGGCCAGTCTGATAAATGCCTGGCATCAG
GTGCAAGCGGCACACGACAACCTGAAATTAGTCTGCGATTTGCATCCGGACGAGGGCATC
AACATGATCGGCTATTCGCAGGGTGGTCTGCTGGGTCGGGCAGTGCTGCAGATCTATCCG
GACCACTGTGTGAAGACGTTCATCTCACTAAGCTCCCCGCAAGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2599#0      CCGCTGAAATCAAAACAAAGCAAAAAACCTCCACTCGTACGAGGAACACAAATGAAACGC 60
consensus_2599#1      --------------------CCGCCCACGCGTCCGCGTACGAGGAACACAAATGAAACGC 40
                                          *     **     * *************************

consensus_2599#0      TAATTTTAGCTAAGCTTACACCTTTTTGCAATAATTGTGACTAAATAGCAATAACACCAT 120
consensus_2599#1      TAATTTTAGCTAAGCTTACACCTTTTTGCAATAATTGTGACTAAATAGCAATAACACCAT 100
                      ************************************************************

consensus_2599#0      AAAGCGTTCAAAATTATCTTAAGTTAGCAACACACAAAAGATAAAACAAACCTCTCTACA 180
consensus_2599#1      AAAGCGTTCAAAATTATCTTAAGTTAGCAACACACAAAAGATAAAACAAACCTCTCTACA 160
                      ************************************************************

consensus_2599#0      TTACACATCACATGGCTGTTGAACAAAGCGAAAGTGCCTAAAGATCATTCCAATACGACA 240
consensus_2599#1      TTACACATCACATGGCTGTTGAACAAAGCGAAAGTGCCTAAAGATCATTCCAATACGACA 220
                      ************************************************************

consensus_2599#0      TTCTTCTAGAATTAACGAAACAAAGAGCAATTTAGTGTGGCCTTACCGAAATGTTCCGAA 300
consensus_2599#1      TTCTTCTAGAATTAACGAAACAAAGAGCAATTTAGTGTGGCCTTACCGAAATGTTCCGAA 280
                      ************************************************************

consensus_2599#0      CGCTAGGCGCCACCGTTCTGTTGCTGAAAATAAGCCTCACGATTGCGTATCGGCCTGTGT 360
consensus_2599#1      CGCTAGGCGCCACCGTTCTGTTGCTGAAAATAAGCCTCACGATTGCGTATCGGCCTGTGT 340
                      ************************************************************

consensus_2599#0      TCATCTACCATGGCATTCTTACTGGTGCGGATAGTATGGGGCATTTGGTCAATAGAATCC 420
consensus_2599#1      TCATCTACCATGGCATTCTTACTGGTGCGGATAGTATGGGGCATTTGGTCAATAGAATCC 400
                      ************************************************************

consensus_2599#0      AGGAGGTTCACCCTGGCACGGTGGTGTACAATTTTGGACGTTTCGGCGGATGGGCCAGTC 480
consensus_2599#1      AGGAGGTTCACCCTGGCACGGTGGTGTACAATTTTGGACGTTTCGGCGGATGGGCCAGTC 460
                      ************************************************************

consensus_2599#0      TGATAAATGCCTGGCATCAGGTGCAAGCGGCACACGACAACCTGAAATTAGTCTGCGATT 540
consensus_2599#1      TGATAAATGCCTGGCATCAGGTGCAAGCGGCACACGACAACCTGAAATTAGTCTGCGATT 520
                      ************************************************************

consensus_2599#0      TGCATCCGGACGAGGGCATCAACATGATCGGCTATTTCGCAGGGTGGTCTGCTGGGTCGG 600
consensus_2599#1      TGCATCCGGACGAGGGCATCAACATGATCGGCTATT-CGCAGGGTGGTCTGCTGGGTCGG 579
                      ************************************ ***********************

consensus_2599#0      GCAGTGCTGCAGATCTATCCGGACCACTGGGGTGAAGACGTTCATCTCACTAAGCTCCCC 660
consensus_2599#1      GCAGTGCTGCAGATCTATCCGGACCACTGTG-TGAAGACGTTCATCTCACTAAGCTCCCC 638
                      ***************************** * ****************************

consensus_2599#0      GCAAGCGGGTC 671
consensus_2599#1      GCAAGC----- 644
                      ******