These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2985#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 717 fasta sequence [AGATTCCGCACGATGGAGAATGTTGAGGAACGTACTTACACTACTGCTGCCAGTGCTGGCAGTGACCGGCGTAAGCGTTGATCCACGATGTACGCGATACAGTCTCGGTTCGGAGGCGCAGGTCCTGCCGCATCTGCAGGACTGTCGCAAGTTTGTCATCTGTGATATGGGCGGCAATGGGCAGGTGCTTTCGTGTCCTCCGGGGCTGTTCTTTAGTGATGAAGCGCACGCCTGCTCGTTCGATATGGCGGCCTGTACGCACGGTGAGCTTGACGAGACGGTGCCCTTCGTTCCCGAGCCACAACCACCACGACCCGTGCCACAGGAGCCCTCGCTACCGGTTGCCCCGGTAGAGCCACGACCTCTTCCGTTGCCGGTACCACAGCCCAGCCACTGCCCGTCATCCCCAGTGATCCGCTGCCGGTTGTGCCACCGATAGTGGAAGGCAATTCGAACGGGGCTGAAACAAAACCATCGCTACCAAACTGGCTACCGATCGTGACGTCACCTCCAGTCATTGAAGAATCCGTGGAAGAACAAGCTGAAATCGAGCAGCTTCCACCGCAGAAGTGTTTGCTGGGATAAGCCGATGGGTAAGATTTACCCCATCGCCAACGACTGCGGCCTGTACGTGGTGTGTATGGGCAACAATGATGNCGATCGGTGGCAAACGCTGCCCCCAANGGGTTTACTGTACGGAATTCAACAACCAGGCAG] [+] EMBL BX468226 [AGATTCCGCACGATGGAGAATGTTGAGGAACGTACTTACACTACTGCTGCCAGTGCTGGCAGTGACCGGCGTAAGCGTTGATCCACGATGTACGCGATACAGTCTCGGTTCGGAGGCGCAGGTCCTGCCGCATCTGCAGGACTGTCGCAAGTTTGTCATCTGTGATATGGGCGGCAATGGGCAGGTGCTTTCGTGTCCTCCGGGGCTGTTCTTTAGTGATGAAGCGCACGCCTGCTCGTTCGATATGGCGGCCTGTACGCACGGTGAGCTTGACGAGACGGTGCCCTTCGTTCCCGAGCCACAACCACCACGACCCGTGCCACAGGAGCCCTCGCTACCGGTTGCCCCGGTAGAGCCACGACCTCTTCCGTTGCCGGTACCACAGCCCAGCCACTGCCCGTCATCCCCAGTGATCCGCTGCCGGTTGTGCCACCGATAGTGGAAGGCAATTCGAACGGGGCTGAAACAAAACCATCGCTACCAAACTGGCTACCGATCGTGACGTCACCTCCAGTCATTGAAGAATCCGTGGAAGAACAAGCTGAAATCGAGCAGCTTCCACCGCAGAAGTGTTTGCTGGGATAAGCCGATGGGTAAGATTTACCCCATCGCCAACGACTGCGGCCTGTACGTGGTGTGTATGGGCAACAATGATGNCGATCGGTGGCAAACGCTGCCCCCAANGGGTTTACTGTACGGAATTCAACAACCAGGCAG] consensusID : consensus_2985#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 57 fasta sequence [AAATTCCCCCCGAGGNNGAATGTTGAGGAACGTACTTACACTACTGCTGCCAGTGCT] [+] EMBL AL932546 [AAATTCCCCCCGAGGNNGAATGTTGAGGAACGTACTTACACTACTGCTGCCAGTGCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2985#0 AGATTCCGCACGATGGAGAATGTTGAGGAACGTACTTACACTACTGCTGCCAGTGCTGGC 60 consensus_2985#1 AAATTCCCCCCGAGGNNGAATGTTGAGGAACGTACTTACACTACTGCTGCCAGTGCT--- 57 * ***** * *** * **************************************** consensus_2985#0 AGTGACCGGCGTAAGCGTTGATCCACGATGTACGCGATACAGTCTCGGTTCGGAGGCGCA 120 consensus_2985#1 ------------------------------------------------------------ consensus_2985#0 GGTCCTGCCGCATCTGCAGGACTGTCGCAAGTTTGTCATCTGTGATATGGGCGGCAATGG 180 consensus_2985#1 ------------------------------------------------------------ consensus_2985#0 GCAGGTGCTTTCGTGTCCTCCGGGGCTGTTCTTTAGTGATGAAGCGCACGCCTGCTCGTT 240 consensus_2985#1 ------------------------------------------------------------ consensus_2985#0 CGATATGGCGGCCTGTACGCACGGTGAGCTTGACGAGACGGTGCCCTTCGTTCCCGAGCC 300 consensus_2985#1 ------------------------------------------------------------ consensus_2985#0 ACAACCACCACGACCCGTGCCACAGGAGCCCTCGCTACCGGTTGCCCCGGTAGAGCCACG 360 consensus_2985#1 ------------------------------------------------------------ consensus_2985#0 ACCTCTTCCGTTGCCGGTACCACAGCCCAGCCACTGCCCGTCATCCCCAGTGATCCGCTG 420 consensus_2985#1 ------------------------------------------------------------ consensus_2985#0 CCGGTTGTGCCACCGATAGTGGAAGGCAATTCGAACGGGGCTGAAACAAAACCATCGCTA 480 consensus_2985#1 ------------------------------------------------------------ consensus_2985#0 CCAAACTGGCTACCGATCGTGACGTCACCTCCAGTCATTGAAGAATCCGTGGAAGAACAA 540 consensus_2985#1 ------------------------------------------------------------ consensus_2985#0 GCTGAAATCGAGCAGCTTCCACCGCAGAAGTGTTTGCTGGGATAAGCCGATGGGTAAGAT 600 consensus_2985#1 ------------------------------------------------------------ consensus_2985#0 TTACCCCATCGCCAACGACTGCGGCCTGTACGTGGTGTGTATGGGCAACAATGATGNCGA 660 consensus_2985#1 ------------------------------------------------------------ consensus_2985#0 TCGGTGGCAAACGCTGCCCCCAANGGGTTTACTGTACGGAATTCAACAACCAGGCAG 717 consensus_2985#1 --------------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||