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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3329#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 724 fasta sequence
[CCCGAGGTTTACTGGTGGATGAGGAGCAGGAGGAGAGCGAGTACGACGAAGCCATCCTCGAGTCGGCTGGTGACATTTTGCCCAAGTTTGGCCGTGCCCTGCCGGCGGAAGAGTTTGCCGTTTACTTTGGACGCGTGTGGCCATACTTTATTCAACACAAACTTGAACAAAACCAAGCAAAACGGATGAAACGAGCGACTCGCAGCGTGCCTTTGCGATCGGCGTGCTGGCGGAACTGCTTTGAACGGTTCTGAACGGAATTCAACCGCAAACTGGATCGACACGCTGCCTGCCCCATCTTCTCTGTCGCCTGCGGCTACAGAGAACCGCAACAACGAGGCTACGCACGCCAACCACCGGCATGCTACGGACTGGCGCAGCAGCACTGCGCTGAACGCACTGCGCACAACGGACTTGCCACTCTCTCCGCGATCACTACTCCGCCAAACTNACTGCGCACGCACCTCTCCCAGCCTCGTACTCCAAAACGCAACAGCATGCCGGCCACACTGGCACAACCCTGCTGCGGAGCCCCCTGCGGCCACGACTCACTTTACTTACCCCAAACCTGCCAGCTNTNTGAGGCATGNCCCGGCCCTGCACACACACGCTGCTNTCCTCCCCCGCGGACTGCATACTCTGCTGCNGNAGCTAATTCTTTCCCAACTCTGGGCCGCTTGCANACGGCAACTTATACTAACCCCCGNACANAAACTCTCTGGGG]
[+] EMBL AL695589 [CCCGAGGTTTACTGGTGGATGAGGAGCAGGAGGAGAGCGAGTACGACGAAGCCATCCTCGAGTCGGCTGGTGACATTTTGCCCAAGTTTGGCCGTGCCCTGCCGGCGGAAGAGTTTGCCGTTTACTTTGGACGCGTGTGGCCATACTTTATTCAACACAAACTTGAACAAAACCAAGCAAAACGGATGAAACGAGCGACTCGCAGCGTGCCTTTGCGATCGGCGTGCTGGCGGAACTGCTTTGAACGGTTCTGAACGGAATTCAACCGCAAACTGGATCGACACGCTGCCTGCCCCATCTTCTCTGTCGCCTGCGGCTACAGAGAACCGCAACAACGAGGCTACGCACGCCAACCACCGGCATGCTACGGACTGGCGCAGCAGCACTGCGCTGAACGCACTGCGCACAACGGACTTGCCACTCTCTCCGCGATCACTACTCCGCCAAACTNACTGCGCACGCACCTCTCCCAGCCTCGTACTCCAAAACGCAACAGCATGCCGGCCACACTGGCACAACCCTGCTGCGGAGCCCCCTGCGGCCACGACTCACTTTACTTACCCCAAACCTGCCAGCTNTNTGAGGCATGNCCCGGCCCTGCACACACACGCTGCTNTCCTCCCCCGCGGACTGCATACTCTGCTGCNGNAGCTAATTCTTTCCCAACTCTGGGCCGCTTGCANACGGCAACTTATACTAACCCCCGNACANAAACTCTCTGGGG]
consensusID : consensus_3329#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 723 fasta sequence
[ATGAAACGAGCGACTCGCAGCGTGCCTTTGCGATCGGCGTGCTGGCGGAATGCTTTGAAGGTTTGAAGGAATTCAACCGCAACTGGATCGACACGCTGCTGCCCATCTTTCTGTCGTGCGTACAGGACCGCAACAACGAGGTACGCAGCAACACGGTGTACGGACTGGGAGAGATGGTGAAGCATGGAAAGGATTGCACTTTCGGTCACTATCCGCAAATTATGGCAGCACTCTCCCGGCTCGTATCCAAAGAACAGCATGCCGGCACACTGGACAACCTGTGCGGAGCCCTGGCACGACTCATTATTACCAACTGCAGTTTGGTGCCGCTGAAAAGTGTTCTCCCGGTGTTTGTGGAGTATCTTCCATTGCGTGAAGATTTTACCGAAAATTTGGCCGTGTTCCAGTGCCTTGATTTGCTGTACAAGCAGGGCGACGAGAACCTAATACCGGCGCTGTGCCGCATTCTGGTGGTTGGTTTGCAGGTGCTTTGCAAGAAGGAGTATGGCACTGAAGAATGCCGCGAACTGGTGCACAATCTGGTGAAACAGATCAGCAAAGACTNCCCGGACAAGTTCGCCGAGGTGATCCGCAGCAGCGCCGAGGCTGCCGAGTTTGTGCAANCGCTTTCGCTGCAGTAGANNTTAGCGAAGCCGCATTNCATGCGCAANCTGTNTGTCACGTACATNANTCATATCTCNGCATAATACATGCATGAAACGG]
[+] EMBL CF541661 [ATGAAACGAGCGACTCGCAGCGTGCCTTTGCGATCGGCGTGCTGGCGGAATGCTTTGAAGGTTTGAAGGAATTCAACCGCAACTGGATCGACACGCTGCTGCCCATCTTTCTGTCGTGCGTACAGGACCGCAACAACGAGGTACGCAGCAACACGGTGTACGGACTGGGAGAGATGGTGAAGCATGGAAAGGATTGCACTTTCGGTCACTATCCGCAAATTATGGCAGCACTCTCCCGGCTCGTATCCAAAGAACAGCATGCCGGCACACTGGACAACCTGTGCGGAGCCCTGGCACGACTCATTATTACCAACTGCAGTTTGGTGCCGCTGAAAAGTGTTCTCCCGGTGTTTGTGGAGTATCTTCCATTGCGTGAAGATTTTACCGAAAATTTGGCCGTGTTCCAGTGCCTTGATTTGCTGTACAAGCAGGGCGACGAGAACCTAATACCGGCGCTGTGCCGCATTCTGGTGGTTGGTTTGCAGGTGCTTTGCAAGAAGGAGTATGGCACTGAAGAATGCCGCGAACTGGTGCACAATCTGGTGAAACAGATCAGCAAAGACTNCCCGGACAAGTTCGCCGAGGTGATCCGCAGCAGCGCCGAGGCTGCCGAGTTTGTGCAANCGCTTTCGCTGCAGTAGANNTTAGCGAAGCCGCATTNCATGCGCAANCTGTNTGTCACGTACATNANTCATATCTCNGCATAATACATGCATGAAACGG]
consensusID : consensus_3329#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 646 fasta sequence
[CCGGGAAGATATCGCCGGGTATAGCATCGAAAATGCGTACATGGACGAAAAGGAGGAAGCGATTCTGGCGCTGATGGAGTTTGCCGAGCATACGGGGCCCGCCTTTGCACCGTTCATACAGACGGCGTTTGAGGAAATCTACAAACTGTTGAACCACCCGAACGAGGACATTCGGAAGGCGTCGATCGACGCGGTCAAACAGTTTGTGGTGGCACTGCACCAGCTGGGCAACATGGAGGGTGTCCACCAGACGATCCTGATTCTGGTGCCGAAGCTGAGCGAAATCATCCGTACGGACGAGGAGCGCACGGTCGTCATGTCGGCGCTGGATGGGTTCAGCGACATACTGCAGGAGGTCGGTGCGGCCACGTTCCAGGCCGACGGGCAGAAGGACGCCGTGTTTAATTGCATTGTGGACGTGCTGAATGGAAAGGTTGCCTGCCAGTTCGATGAGCCGGTGGATGAGGAGCAGGAGGAGAGCGAGTACGACGAAGCCATCCTCGAGTCGGCTGGTGACATTTTGCCCAAGTTTGGCCGTGCCCTGCCGGCGGAAGAGTTTGCCGTTTACTTTGGACGCGTGTGGCCATACTTTATTCAAAAAATTGAAAAAACCAAGCAAAAAGGATGAAACGAGCGACTCGCAGCG]
[+] EMBL BM636089 [CCGGGAAGATATCGCCGGGTATAGCATCGAAAATGCGTACATGGACGAAAAGGAGGAAGCGATTCTGGCGCTGATGGAGTTTGCCGAGCATACGGGGCCCGCCTTTGCACCGTTCATACAGACGGCGTTTGAGGAAATCTACAAACTGTTGAACCACCCGAACGAGGACATTCGGAAGGCGTCGATCGACGCGGTCAAACAGTTTGTGGTGGCACTGCACCAGCTGGGCAACATGGAGGGTGTCCACCAGACGATCCTGATTCTGGTGCCGAAGCTGAGCGAAATCATCCGTACGGACGAGGAGCGCACGGTCGTCATGTCGGCGCTGGATGGGTTCAGCGACATACTGCAGGAGGTCGGTGCGGCCACGTTCCAGGCCGACGGGCAGAAGGACGCCGTGTTTAATTGCATTGTGGACGTGCTGAATGGAAAGGTTGCCTGCCAGTTCGATGAGCCGGTGGATGAGGAGCAGGAGGAGAGCGAGTACGACGAAGCCATCCTCGAGTCGGCTGGTGACATTTTGCCCAAGTTTGGCCGTGCCCTGCCGGCGGAAGAGTTTGCCGTTTACTTTGGACGCGTGTGGCCATACTTTATTCAAAAAATTGAAAAAACCAAGCAAAAAGGATGAAACGAGCGACTCGCAGCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3329#0 CCCGAGGTTTACTGGTGGATGAGGAGCAGGAG---GAGAGCGAGTACGACGAAGCCATCC 57
consensus_3329#1 ------ATGAAACGAGCGACTCGCAGCGTGCCTTTGCGATCG-GCGTGCTGGCGGAATGC 53
consensus_3329#2 ---------------------------------CCGGGAAGATAT-CGCCGGGTATAGCA 26
* ** * * *
consensus_3329#0 TCGAGTCGGCTGGTGACATTTTGCCCAAGTTTGGCCG-TGCCCTGCCGGCGGAAGAGTTT 116
consensus_3329#1 TTTGAAGGTTTGAAGGAATTCAACCGCAACTGGATCGACACGCTGCTGCCC-ATCTTTCT 112
consensus_3329#2 TCGAA---AATGCGTACATG-GACGAAAAGGAGGAAGCGATTCTGGCGCTGATGGAGTTT 82
* ** ** * * * * *** * * *
consensus_3329#0 GCCGTTTACTTTGGACGCGTGTGGCCATACTTTATTCAACACAAACTTGAACAAAACCAA 176
consensus_3329#1 GTCGTGCGTACAGGAC---CGCAACAACGAGGTACGCAGCAACACGGTGTACGGA-CTGG 168
consensus_3329#2 GCCGAGCATACGGGGCCCGCCTTTGCACCGTTCATACAGACGGCGTTTGAGGAAATCTAC 142
* ** ** * * * ** ** * *
consensus_3329#0 GCAAAACGGATGAAAC---GAGCGACTCGCAGCGTGCCTTTGCGATCGGCGTGCT--GGC 231
consensus_3329#1 GAGAGATGG-TGAAGCATGGAAAGGATTGCA-CTTTCGGTCACTATCCGCAAATTATGGC 226
consensus_3329#2 ---AAACTGTTGAACC---ACCCGAACGAGGACATTCGGAAGGCGTCGATCGACG-CGGT 195
* * * **** * * * * * ** **
consensus_3329#0 GGAACTGCTTTGAACGGTTCTGAACGGAATTCAACC--GCAAACTGGATCG-ACACGCTG 288
consensus_3329#1 AGCACTCTCCCGGCTCGTATCCAAAGAACAGCATGCCGGCACACTGGA-CA-ACCTGTGC 284
consensus_3329#2 CAAACAGTTTGTGGTGGCACTGCAC------CAGCTGGGCAACATGGAGGGTGTCCACCA 249
** * * ** *** ****
consensus_3329#0 CCTGCCCCATCTTCTCT-GTCGCCTGCGGCTACAGAGAACCGCAACAACGAGGCTACGCA 347
consensus_3329#1 GGAGCCCTGGCACGACTCATTATTACCAACTGCAGTTTGGTGCCGCTGAAAAGT---GTT 341
consensus_3329#2 GACGATCCTGATTCTGGTGCCGAAGCTGAGCGAAATCATCCGTACGGACGAGGA-GCGCA 308
* * * * * * *
consensus_3329#0 CGCCAACCACCGGCATGCTACGGACTGGCGCAGCAGCACTGCGCTGAACGC---ACTGCG 404
consensus_3329#1 CTCCCGGTGTTTGTGGAGTATCTTCCATTGCGTGAAGATTTTACCGAAAATTTGGCCGTG 401
consensus_3329#2 CGGTCGTCAT--GTCGGCGCTGGATGGGTTCAGCGACATACTGCAGGAGGTC--GGTGCG 364
* * * * * * * * *
consensus_3329#0 CACAACGGACTTGCCACTCTCTCCGCGATCACTACTCCGCCAAACTN-ACTGCGCACGCA 463
consensus_3329#1 TTCCAGTGCCTTG--ATTTGCTGTACAAGCAGGGCGACGAGAACCTA-ATACCG-GCGC- 456
consensus_3329#2 -GCCACGTTCCAG--GCCGACGGGCAGAAGGACGCCGTGTTTAATTGCATTGTGGACGTG 421
* * * * * * * * * * * * **
consensus_3329#0 CCTC-TCCCAGCCTCGTACTCCAAAACGCAACAGCATGCCGGCCACAC---TGGCAC--A 517
consensus_3329#1 TGTG-CCGCATTCTGGTGGTT-GGTTTGCAGGTGCTTTGCAAGAAGGAGTATGGCACTGA 514
consensus_3329#2 CTGAATGGAAAGGTTGCCTGCCAGTTCG-ATGAGCCGGTGGATGAGGAGCAGGAGGAGAG 480
* * * * * ** * *
consensus_3329#0 ACCCTGCTGCGGAGCCCCCTGCGGCCACGACTCACTTTACTTACCCCAAACCTGCCAGCT 577
consensus_3329#1 AGAATGCCGCGAA--CTGGTGCACAATCTGGTGAAACAGATCAGCAAAGACTNCCCGGAC 572
consensus_3329#2 CGAGTACGACGAAGCCATCCTCGAGT-CGGCTGGTGACATTTTGCCCAAGTTTGGCCGTG 539
* * ** * * * * * * * * * *
consensus_3329#0 NTNTGA-GGC--ATGNCCCGGCCCTGCA-CACACACGCTGCTNTCCTCCCCCGCGGACTG 633
consensus_3329#1 AAGTTC-GCC--GAGGTGATCCGCAGCAGCGCCGAGGCTGCCGAGTTTGTGCA---ANCG 626
consensus_3329#2 CCCTGCCGGCGGAAGAGTTTGCCGTTTACTTTGGACGCGTGTGGCCATACTT------TA 593
* * * * * * * **
consensus_3329#0 CATACTCTGCTGCNGNAGCTAATTCTTTCCCAACTC-TGGGCCGCTTGCANACGGC--AA 690
consensus_3329#1 CTTTCGCTGCAGTAGANNTTAGCGAAGCCGCATTNCATGCGCAANCTGTNTGTCACGTAC 686
consensus_3329#2 TTCAAAAAATTGAAAAAACCAAGCAAAAAGGATGAAACGAGCGACTCGCAGCG------- 646
* * * * ** *
consensus_3329#0 CTTATACTAACCCCCGNACANAAACTCTCTGGGG--- 724
consensus_3329#1 ATNANTCATATCTCNGCATAATACATGCATGAAACGG 723
consensus_3329#2 -------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||