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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3351#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1108 fasta sequence
[CGTGATTTGGAATTGTTTACTTTGCGTGCAATTGCAGCAACGGGCGGCCGCATTAACACCCCCCCCCCCCACCTACCCAACCATATGTTTGTTGCACCACGAGGCGAGGCGAAATTGTGTGTGTGTGTATGCGAATACAGTTAAAAAATTCACGACAAAAGCGGCTGGGTTGCGAAAATGTCCTACCACCCCCTCCTCCCCCCCTCCGATTAATTTTTTAATTTGTTGCGTTTTGTTTTTTGTTGTTGTTTTGTCTCCACTCGCAATCATCATACGAACGAAGCAGAGCATAATTGGAAGCACTGACAGAAGGAAGGAGGAAGGAGCGGGGTAGTAAAATTTAACGTACTTTTTGTTTTTGCCGTTGCTGCTGCTGTGCCTTCGTTTTTGCGTCTGTTTCGATTATTGCGACGTTAGCAACATGGGACACCACCCCGTCCCCTTCTAAATCCTCCCCACCCCTTTTAAACCCTCCTTCCAGCAGTAACATTACACACACACACACACACAGTGTGTTAAAGGCTGTGCAGGAGTGTGTGTGTGTGTGTGTGTGCGTGCGCGCGCGCGTGCTCGCTCCTTTGTGTGTGCGTGCGCCATCTTTGTTATTTGTAATTTTGTAATCTTTGTTTTGGAGACGCACTTGCTCTCTTCCCTCCCCCTCTCTCTTCCTTTCCTTTCCTTACCCTTCCCTACGGCTCAAGCAAAAACGAACACACACACACAACCATAAGATAAAAGTAACCTGGTGACTTTGTGNGCGTCTCTCTGTGTGTATGTGTGTGTGCGCGTTTGGAANAGTGTTAGAAAATAATGCAAGTTGTGTGCGTGTGTGTTTGTGTGCGTAAATGGCGTATTACTGAATGTGCATCTTTGGTTTGTGCTTGTGTGCGAGAGAATCCAATCCATGCCAAAACTCAATACGTAAAATGTGCTAATGTTTGTTGGCATTTGTTGGGAGCGATAGAAGCAACAAAAAAACAACCACAATTCACAGACACATATGTTGGCAAGGTTAAAATTTATTGGAAAAAAATGTGTGCATTTGTCATTTTGTTTTTTTTTGTTTAATATGCGAACCATCACTATAAGCAAGCGTGTGTCATAAAAG]
[+] EMBL BX625166 [CGTGATTTGGAATTGTTTACTTTGCGTGCAATTGCAGCAACGGGCGGCCGCATTAACACCCCCCCCCCCCACCTACCCAACCATATGTTTGTTGCACCACGAGGCGAGGCGAAATTGTGTGTGTGTGTATGCGAATACAGTTAAAAAATTCACGACAAAAGCGGCTGGGTTGCGAAAATGTCCTACCACCCCCTCCTCCCCCCCTCCGATTAATTTTTTAATTTGTTGCGTTTTGTTTTTTGTTGTTGTTTTGTCTCCACTCGCAATCATCATACGAACGAAGCAGAGCATAATTGGAAGCACTGACAGAAGGAAGGAGGAAGGAGCGGGGTAGTAAAATTTAACGTACTTTTTGTTTTTGCCGTTGCTGCTGCTGTGCCTTCGTTTTTGCGTCTGTTTCGATTATTGCGACGTTAGCAACATGGGACACCACCCCGTCCCCTTCTAAATCCTCCCCACCCCTTTTAAACCCTCCTTCCAGCAGTAACATTACACACACACACACACACAGTGTGTTAAAGGCTGTGCAGGAGTGTGTGTGTGTGTGTGTGTGCGTGCGCGCGCGCGTGCTCGCTCCTTTGTGTGTGCGTGCGCCATCTTTGTTATTTGTAATTTTGTAATCTTTGTTTTGGAGACGCACTTGCTCTCTTCCCTCCCCCTCTCTCTTCCTTTCCTTTCCTTACCCTTCCCTACGGCTCAAGCAAAAACGAACACACACACACAACCATAAGATAAAAGTAACCTGGTGACTTTGTGNGCGTCTCTCTGTGTGTATGTGTGTGTGCGCGTTTGGAANAGT ]
[-] EMBL AGA281804 [ CGTCTCTCTGTGTGTATGTGTGTGTGCGCGTTTGGAAGAGTGTTAGAAAATAATGCAAGTTGTGTGCGTGTGTGTTTGTGTGCGTAAATGGCGTATTACTGAATGTGCATCTTTGGTTTGTGCTTGTGTGCGAGAGAATCCAATCCATGCCAAAACTCAATACGTAAAATGTGCTAATGTTTGTTGGCATTTGTTGGGAGCGATAGAAGCAACAAAAAAACAACCACAATTCACAGACACATATGTTGGCAAGGTTAAAATTTATTGGAAAAAAATGTGTGCATTTGTCATTTTGTTTTTTTTTGTTTAATATGCGAACCATCACTATAAGCAAGCGTGTGTCATAAAAG]
consensusID : consensus_3351#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 389 fasta sequence
[CCCCCCCCCACCTACCCAACCATATGTTTGTTGCACCGAGGCGAAATTGTGTGTGTGCGTGCGCGCGCGCGTGCTCGCTCCTTTGTGTGTGCGTGCGCCATCTTTGTTATTTGTAATTTTGTAATCTTTGTTTTGGAGACGCACTTGCTCTCTTCCCTCCCCCTCTCTCTTCCTTTCCTTTCCTTACCCTTCCCTACGGCTCAAGCAAAAACGAACACACACACACAACCATAAGATAAAAGTAACCTGGTGACTTTGTGTGCGTCTCTCTGTGTGTATGTGTGTGTGCGCGTTTGGAAGAGTGTTAGAAAATAATGCAAGTTGTNTNCNTGTGTGTTTGTGTGCGTAAATGGCGTATTACTGAATGTGCATCTTTGGTTTGTGCCTGT]
[+] EMBL AGA280106 [CCCCCCCCCACCTACCCAACCATATGTTTGTTGCACCGAGGCGAAATTGTGTGTGTGCGTGCGCGCGCGCGTGCTCGCTCCTTTGTGTGTGCGTGCGCCATCTTTGTTATTTGTAATTTTGTAATCTTTGTTTTGGAGACGCACTTGCTCTCTTCCCTCCCCCTCTCTCTTCCTTTCCTTTCCTTACCCTTCCCTACGGCTCAAGCAAAAACGAACACACACACACAACCATAAGATAAAAGTAACCTGGTGACTTTGTGTGCGTCTCTCTGTGTGTATGTGTGTGTGCGCGTTTGGAAGAGTGTTAGAAAATAATGCAAGTTGTNTNCNTGTGTGTTTGTGTGCGTAAATGGCGTATTACTGAATGTGCATCTTTGGTTTGTGCCTGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3351#0 CGTGATTTGGAATTGTTTACTTTGCGTGCAATTGCAGCAACGGGCGGCCGCATTAACACC 60
consensus_3351#1 ------------------------------------------------------------
consensus_3351#0 CCCCCCCCCCACCTACCCAACCATATGTTTGTTGCACCACGAGGCGAGGCGAAATTGTGT 120
consensus_3351#1 ------------------------------------------------------------
consensus_3351#0 GTGTGTGTATGCGAATACAGTTAAAAAATTCACGACAAAAGCGGCTGGGTTGCGAAAATG 180
consensus_3351#1 ------------------------------------------------------------
consensus_3351#0 TCCTACCACCCCCTCCTCCCCCCCTCCGATTAATTTTTTAATTTGTTGCGTTTTGTTTTT 240
consensus_3351#1 ------------------------------------------------------------
consensus_3351#0 TGTTGTTGTTTTGTCTCCACTCGCAATCATCATACGAACGAAGCAGAGCATAATTGGAAG 300
consensus_3351#1 ------------------------------------------------------------
consensus_3351#0 CACTGACAGAAGGAAGGAGGAAGGAGCGGGGTAGTAAAATTTAACGTACTTTTTGTTTTT 360
consensus_3351#1 ------------------------------------------------------------
consensus_3351#0 GCCGTTGCTGCTGCTGTGCCTTCGTTTTTGCGTCTGTTTCGATTATTGCGACGTTAGCAA 420
consensus_3351#1 ------------------------------------------------------------
consensus_3351#0 CATGGGACACCACCCCGTCCCCTTCTAAATCCTCCCCACCCCTTTTAAACCCTCCTTCCA 480
consensus_3351#1 ------------------------------------------------------------
consensus_3351#0 GCAGTAACATTACACACACACACACACACAGTGTGTTAAAGGCTGTGCAGGAGTGTGTGT 540
consensus_3351#1 ------------CCCCCCCCCACCTACCCAACCATATGTTTGTTGCACCGAGGCGAAATT 48
* * * * *** ** ** * * ** * * * * *
consensus_3351#0 GTGTGTGTGTGTGCGTGCGCGCGCGCGTGCTCGCTCCTTTGTGTGTGCGTGCGCCATCTT 600
consensus_3351#1 GTGTGTGTG----CGTGCGCGCGCGCGTGCTCGCTCCTTTGTGTGTGCGTGCGCCATCTT 104
********* ***********************************************
consensus_3351#0 TGTTATTTGTAATTTTGTAATCTTTGTTTTGGAGACGCACTTGCTCTCTTCCCTCCCCCT 660
consensus_3351#1 TGTTATTTGTAATTTTGTAATCTTTGTTTTGGAGACGCACTTGCTCTCTTCCCTCCCCCT 164
************************************************************
consensus_3351#0 CTCTCTTCCTTTCCTTTCCTTACCCTTCCCTACGGCTCAAGCAAAAACGAACACACACAC 720
consensus_3351#1 CTCTCTTCCTTTCCTTTCCTTACCCTTCCCTACGGCTCAAGCAAAAACGAACACACACAC 224
************************************************************
consensus_3351#0 ACAACCATAAGATAAAAGTAACCTGGTGACTTTGTGNGCGTCTCTCTGTGTGTATGTGTG 780
consensus_3351#1 ACAACCATAAGATAAAAGTAACCTGGTGACTTTGTGTGCGTCTCTCTGTGTGTATGTGTG 284
************************************ ***********************
consensus_3351#0 TGTGCGCGTTTGGAANAGTGTTAGAAAATAATGCAAGTTGTGTGCGTGTGTGTTTGTGTG 840
consensus_3351#1 TGTGCGCGTTTGGAAGAGTGTTAGAAAATAATGCAAGTTGTNTNCNTGTGTGTTTGTGTG 344
*************** ************************* * * **************
consensus_3351#0 CGTAAATGGCGTATTACTGAATGTGCATCTTTGGTTTGTGCTTGTGTGCGAGAGAATCCA 900
consensus_3351#1 CGTAAATGGCGTATTACTGAATGTGCATCTTTGGTTTGTGCCTGT--------------- 389
***************************************** ***
consensus_3351#0 ATCCATGCCAAAACTCAATACGTAAAATGTGCTAATGTTTGTTGGCATTTGTTGGGAGCG 960
consensus_3351#1 ------------------------------------------------------------
consensus_3351#0 ATAGAAGCAACAAAAAAACAACCACAATTCACAGACACATATGTTGGCAAGGTTAAAATT 1020
consensus_3351#1 ------------------------------------------------------------
consensus_3351#0 TATTGGAAAAAAATGTGTGCATTTGTCATTTTGTTTTTTTTTGTTTAATATGCGAACCAT 1080
consensus_3351#1 ------------------------------------------------------------
consensus_3351#0 CACTATAAGCAAGCGTGTGTCATAAAAG 1108
consensus_3351#1 ----------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||