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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3663#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1282 fasta sequence
[GACGATCTGAAGGACGCCTACCATCAGCTGCAGGTGCGAGGCAGCGAACTGAACAGCAACAAGGTGGAGTTGCTGAAACACCGACAAGAAATCGATAAATTAAACGAAGACATTTGTCAGTTAAGCACACTGTGCAGTGATAGCAAGCAGGCCAAGAAGATTGTGATCGATCGGGAGGAGATCTTGAACGCATTTAAGCTCTGCAACGAGGATGGTGTCGTGCCGGAGCAGGAACTGTCCCAATTTATCGTTCAGGCATGCACTGAGATTCCCAAACTGAAGGCCAAGCTGTTCGAAAAGGAGCAACAGCTGGCGACGATGGCAAGCAATGCCACGAGTGGGTCCAATTTCGTGATGACGGCCAGCTGGCACCAAGCGCTGAGCGAAGCGAAACGACAGTACGAGGCGATCGATCGCGCTTTGGAGACACTGGACAGCGTCAAAGCGATCGTACAGCAAACACCGGCCCTGATGGAGCTGCAGCGTGATCTGGAGGAGACGAACTTTGCTTCCGCGTCCAGCTTTCCGCTGGTAACGGCGGCCCAGCTCAACCAGCTCAACTGTGGCCAGGTCGGTACGAACGGCAATGGGGCCGGCGTAAACGGCAACGGCATTATTGATCTGAACGCCAACGAAACGACGCTCGGCAACGAGGCGGCAAGTGTGGGGGCCGATCCGAGCTGCTACATTGACTCGACTGCTT-AAACTTAACGGATATCATCAGCTGGGGTAGATAGAACGCTTTATTTATTACTACCTTCGCTCTCTCTCTCTTTAGGCAGACAGGCGGTAGCATTCATTTTACTTTAATTGTTTACCACTCGTGGGACTTTTGGGTCGAGGATGGGATGGAGTGTTTTTTTTCCATTTTTTTGTTTTTGTGTTAGTGTTTTTTCGTTGATCAAAACAAGCATGATATTATCATCATTCATTTTCGAGCGCATGGTCCATAGTAACTGATTGCATTTCGTTTTGCTACACTTAACTCTGGGGCAGTACGTAAGTGGCGACCGTCATGAATAGTGAACCATGTTGAACAGATATTAGAATCGTTAGCAATCGTAGCAGCAAGTAGCAAACAAGGTAACAATGTCCCCCCTTCTCTAGTTCGATAGTTAGCATTAATCGTAGAGGTATGATTGTGATTTGCTGTTCTTGATACTATACAGACTTGATTGAAACGATTATTGGACGGGAGATGCAAGATTAGAGCCAATAGGGAAGGTGTTGTTACTCGAGACAAATAAGTGTAAAGATAATAATTTATTTCCTAATCGCATTT]
[+] EMBL BX624750 [GACGATCTGAAGGACGCCTACCATCAGCTGCAGGTGCGAGGCAGCGAACTGAACAGCAACAAGGTGGAGTTGCTGAAACACCGACAAGAAATCGATAAATTAAACGAAGACATTTGTCAGTTAAGCACACTGTGCAGTGATAGCAAGCAGGCCAAGAAGATTGTGATCGATCGGGAGGAGATCTTGAACGCATTTAAGCTCTGCAACGAGGATGGTGTCGTGCCGGAGCAGGAACTGTCCCAATTTATCGTTCAGGCATGCACTGAGATTCCCAAACTGAAGGCCAAGCTGTTCGAAAAGGAGCAACAGCTGGCGACGATGGCAAGCAATGCCACGAGTGGGTCCAATTTCGTGATGACGGCCAGCTGGCACCAAGCGCTGAGCGAAGCGAAACGACAGTACGAGGCGATCGATCGCGCTTTGGAGACACTGGACAGCGTCAAAGCGATCGTACAGCAAACACCGGCCCTGATGGAGCTGCAGCGTGATCTGGAGGAGACGAACTTTGCTTCCGCGTCCAGCTTTCCGCTGGTAACGGCGGCCCAGCTCAACCAGCTCAACTGTGGCCAGGTCGGTACGAACGGCAATGGGGCCGGCGTAAACGGCAACGGCATTATTGATCTGAACGCCAACGAAACGACGCTCGGCAACGAGGCGGCAAGTGTGGGGGCCGATCCGAGCTGCTACATTGACTCGACTGCTT AAACTTAACGGATATCATCAGCTGGGGTAGATAGAACGCTTTATTTATTACTACCTTCGCT ]
[+] EMBL BM610395 [ ccgCGCCAACGAAACGACGCTCGGCAACGAGGCGGCAAGTGTGGGGGCCGATCCGAGCTGCTACATTGACTCGACTGCTTAAAACTTAACGGATATCATCAGCTGGGGTAGATAGAACGCTTTATTTATTACTACCTTCGCTCTCTCTCTCTTTAGGCAGACAGGCGGTAGCATTCATTTTACTTTAATTGTTTACCACTCGTGGGACTTTTGGGTCGAGGATGGGATGGAGTGTTTTTTTTCCATTTTTTTGTTTTTGTGTTAGTGTTTTTTCGTTGATCAAAACAAGCATGATATTATCATCATTCATTTTCGAGCGCATGGTCCATAGTAACTGATTGCATTTCGTTTTGCTACACTTAACTCTGGGGCAGTACGTAAGTGGCGACCGTCATGAATAGTGAACCATGTTGAACAGATATTAGAATCGTTAGCAATCGTAGCAGCAAGTAGCAAACAAGGTAACAATGTCCCCCCTTCTCTAGTTCGATAGTTAGCATTAATCGTAGAGGTATGATTGTGATTTGCTGTTCTTGATACTATACAGACTTGATTGAAACGATTATTGGACGGGAGATGCAAGATTAGAGCCAATAGGGAAGGTGTTGTTACTCGAGACAAATAAGTGTAAAGATAATAATTTATTTCCTAATCGCATTT]
consensusID : consensus_3663#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 340 fasta sequence
[AGAATCGGCCACGAGGTTGATNAGGAGATCTTGAACGCATTTAACGCTCTGCAACGAGGATGGTGTCGTGCCGGAGCAGGAACTGTCCCAATTTATCGTTCAGGCATGCACTGAGATTCCCAAACTGTGAAGGCCAAGCTGTTCGAAAAGGAGCAACAGCTGGCGACGATGGCAAGCAATGCCACGAGTGGGTCCAAGTTTCGTGATGACGGCCAGCTGGCACCAAGCGCTGAGCGAAGCGAAACGACAGTACGAGGCGATCGATCGCGCTTTGGAGACACTGGACAGCGTCAAAGCGATCGTACAGCGAAACACCGGNCCTGATGGAGGCTGCAGNGTG]
[+] EMBL BX469426 [AGAATCGGCCACGAGGTTGATNAGGAGATCTTGAACGCATTTAACGCTCTGCAACGAGGATGGTGTCGTGCCGGAGCAGGAACTGTCCCAATTTATCGTTCAGGCATGCACTGAGATTCCCAAACTGTGAAGGCCAAGCTGTTCGAAAAGGAGCAACAGCTGGCGACGATGGCAAGCAATGCCACGAGTGGGTCCAAGTTTCGTGATGACGGCCAGCTGGCACCAAGCGCTGAGCGAAGCGAAACGACAGTACGAGGCGATCGATCGCGCTTTGGAGACACTGGACAGCGTCAAAGCGATCGTACAGCGAAACACCGGNCCTGATGGAGGCTGCAGNGTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3663#0 GACGATCTGAAGGACGCCTACCATCAGCTGCAGGTGCGAGGCAGCGAACTGAACAGCAAC 60
consensus_3663#1 ------------------------------------------------------------
consensus_3663#0 AAGGTGGAGTTGCTGAAACACCGACAAGAAATCGATAAATTAAACGAAGACATTTGTCAG 120
consensus_3663#1 ------------------------------------------------------------
consensus_3663#0 TTAAGCACACTGTGCAGTGATAGCAAGCAGGCCAAGAAGATTGTGATCGATCGGGAGGAG 180
consensus_3663#1 -----------------------AGAATCGGCCACGAGG-------TTGATN---AGGAG 27
* ***** ** * * *** *****
consensus_3663#0 ATCTTGAACGCATTTAA-GCTCTGCAACGAGGATGGTGTCGTGCCGGAGCAGGAACTGTC 239
consensus_3663#1 ATCTTGAACGCATTTAACGCTCTGCAACGAGGATGGTGTCGTGCCGGAGCAGGAACTGTC 87
***************** ******************************************
consensus_3663#0 CCAATTTATCGTTCAGGCATGCACTGAGATTCCCAAACTG--AAGGCCAAGCTGTTCGAA 297
consensus_3663#1 CCAATTTATCGTTCAGGCATGCACTGAGATTCCCAAACTGTGAAGGCCAAGCTGTTCGAA 147
**************************************** ******************
consensus_3663#0 AAGGAGCAACAGCTGGCGACGATGGCAAGCAATGCCACGAGTGGGTCCAA-TTTCGTGAT 356
consensus_3663#1 AAGGAGCAACAGCTGGCGACGATGGCAAGCAATGCCACGAGTGGGTCCAAGTTTCGTGAT 207
************************************************** *********
consensus_3663#0 GACGGCCAGCTGGCACCAAGCGCTGAGCGAAGCGAAACGACAGTACGAGGCGATCGATCG 416
consensus_3663#1 GACGGCCAGCTGGCACCAAGCGCTGAGCGAAGCGAAACGACAGTACGAGGCGATCGATCG 267
************************************************************
consensus_3663#0 CGCTTTGGAGACACTGGACAGCGTCAAAGCGATCGTACAGC-AAACACCGGCCCTGATGG 475
consensus_3663#1 CGCTTTGGAGACACTGGACAGCGTCAAAGCGATCGTACAGCGAAACACCGGNCCTGATGG 327
***************************************** ********* ********
consensus_3663#0 AG-CTGCAGCGTGATCTGGAGGAGACGAACTTTGCTTCCGCGTCCAGCTTTCCGCTGGTA 534
consensus_3663#1 AGGCTGCAGNGTG----------------------------------------------- 340
** ****** ***
consensus_3663#0 ACGGCGGCCCAGCTCAACCAGCTCAACTGTGGCCAGGTCGGTACGAACGGCAATGGGGCC 594
consensus_3663#1 ------------------------------------------------------------
consensus_3663#0 GGCGTAAACGGCAACGGCATTATTGATCTGAACGCCAACGAAACGACGCTCGGCAACGAG 654
consensus_3663#1 ------------------------------------------------------------
consensus_3663#0 GCGGCAAGTGTGGGGGCCGATCCGAGCTGCTACATTGACTCGACTGCTTAAACTTAACGG 714
consensus_3663#1 ------------------------------------------------------------
consensus_3663#0 ATATCATCAGCTGGGGTAGATAGAACGCTTTATTTATTACTACCTTCGCTCTCTCTCTCT 774
consensus_3663#1 ------------------------------------------------------------
consensus_3663#0 TTAGGCAGACAGGCGGTAGCATTCATTTTACTTTAATTGTTTACCACTCGTGGGACTTTT 834
consensus_3663#1 ------------------------------------------------------------
consensus_3663#0 GGGTCGAGGATGGGATGGAGTGTTTTTTTTCCATTTTTTTGTTTTTGTGTTAGTGTTTTT 894
consensus_3663#1 ------------------------------------------------------------
consensus_3663#0 TCGTTGATCAAAACAAGCATGATATTATCATCATTCATTTTCGAGCGCATGGTCCATAGT 954
consensus_3663#1 ------------------------------------------------------------
consensus_3663#0 AACTGATTGCATTTCGTTTTGCTACACTTAACTCTGGGGCAGTACGTAAGTGGCGACCGT 1014
consensus_3663#1 ------------------------------------------------------------
consensus_3663#0 CATGAATAGTGAACCATGTTGAACAGATATTAGAATCGTTAGCAATCGTAGCAGCAAGTA 1074
consensus_3663#1 ------------------------------------------------------------
consensus_3663#0 GCAAACAAGGTAACAATGTCCCCCCTTCTCTAGTTCGATAGTTAGCATTAATCGTAGAGG 1134
consensus_3663#1 ------------------------------------------------------------
consensus_3663#0 TATGATTGTGATTTGCTGTTCTTGATACTATACAGACTTGATTGAAACGATTATTGGACG 1194
consensus_3663#1 ------------------------------------------------------------
consensus_3663#0 GGAGATGCAAGATTAGAGCCAATAGGGAAGGTGTTGTTACTCGAGACAAATAAGTGTAAA 1254
consensus_3663#1 ------------------------------------------------------------
consensus_3663#0 GATAATAATTTATTTCCTAATCGCATTT 1282
consensus_3663#1 ----------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||