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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3699#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 926 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGATCGCCTGCGATCGCTTCCGGGACAAAAGCACGCTAAGGAAATATTCCGCAAGCAGTTGAAGAACGCGGTCACAAAGAAAAGCGACTAATACACGCCAAAACCCCGTTCGTTCGTTTGTTGACCGGGTAAGTGGCTAATCTTTTAAAGCTGATAAGCGCCAGAACGCCGCCGCTGTCACTATTGTTTCGGACGCTGGTCCGGGTGCACGTTGACGAAATCGGAACCCGCCGCTTGTCTACACACAAGCCCCGCGCACATACGCGAGAGCGGCGTGTTGAATCTTAGCCTCCTAGGAGAAACCGAAGCAACCGAAGCGTACTAGAGAAGGTAGACATCATGCGGTTAGTGTTGCGCAACCGCAAGCTCCCGTTGGCCGCCGTCGGCTGCCTGGTCGGGCTGGTGTTGCTCTGGAAATGGGCGGACGTGCGATCGATGTGCTGGGGCGGCAGCAGCAGCAGTGCCCACAGTGCCGGTGTCATGGTGCGAGATGAACAGACGGCGGAAGGTGGAGGCAACTATCGGTACCATCGGAACATGCCGCTAATATTTTATCGGCGGTGTGCCCCGTTCCGGTACCACGCTGATGCGCGCCATGCTAGATGCCCATCCGGAAGTACGCTGCGGTCAGGAAACGCGCGTCATACCACGCATCCTGCAGCTGCGCTCCCACTGGATGAAGTCGGAGAAGGAATCGGTCCGGCTGGTGGAGGCCGGCATCACGAAGGAGGTGCTGAACGGGGCGATCGCCCAGTTCTGTCTCGAGATCATTGCCAAGCACGGCGATCCGGCCCCGCGGCTCTGCAACAAGGATCCGCTCACGCTCAAGATGGGCTCGTACGTGATCGAGCTGTTCCCGGCGGCCAAGTTTCTGTTCATGGTGCGGGAACGGGCGGGCCAC]
[+] EMBL BM650625 [CCGCCCACGCGTCCGCCCACGCGTCCGATCGCCTGCGATCGCTTCCGGGACAAAAGCACGCTAAGGAAATATTCCGCAAGCAGTTGAAGAACGCGGTCACAAAGAAAAGCGACTAATACACGCCAAAACCCCGTTCGTTCGTTTGTTGACCGGGTAAGTGGCTAATCTTTTAAAGCTGATAAGCGCCAGAACGCCGCCGCTGTCACTATTGTTTCGGACGCTGGTCCGGGTGCACGTTGACGAAATCGGAACCCGCCGCTTGTCTACACACAAGCCCCGCGCACATACGCGAGAGCGGCGTGTTGAATCTTAGCCTCCTAGGAGAAACCGAAGCAACCGAAGCGTACTAGAGAAGGTAGACATCATGCGGTTAGTGTTGCGCAACCGCAAGCTCCCGTTGGCCGCCGTCGGCTGCCTGGTCGGGCTGGTGTTGCTCTGGAAATGGGCGGACGTGCGATCGATGTGCTGGGGCGGCAGCAGCAGCAGTGCCCACAGTGCCGGTGTCATGGTGCGAGATGAACAGACGGCGGAAGGTGGAGGCAACTATCGGTACCATCGGAACATGCCGCTAATATTTTATCGGCGGTGTGCCCCGTTCCGG ]
[+] EMBL BM609029 [ ccgGTACTAGAGAAGGTAGACATCATGCGGTTAGTGTTGCGCAACCGCAAGCTCCCGTTGGCCGCCGTCGGCTGCCTGGTCGGGCTGGTGTTGCTCTGGAAATGGGCGGACGTGCGATCGATGTGCTGGGGCGGCAGCAGCAGCAGTGCCCACAGTGCCGGTGTCATGGTGCGAGATGAACAGACGGCGGAAGGTGGAGGCAACTATCGGTACCATCGGAACATGCCGCTAATA TTTATCGGCGGTGTGCCCCGTTCCGGTACCACGCTGATGCGCGCCATGCTAGATGCCCATCCGGAAGTACGCTGCGGTCAGGAAACGCGCGTCATACCACGCATCCTGCAGCTGCGCTCCCACTGGATGAAGTCGGAGAAGGAATCGGTCCGGCTGGTGGAGGCCGGCATCACGAAGGAGGTGCTGAACGGGGCGATCGCCCAGTTCTGTCTCGAGATCATTGCCAAGCACGGCGATCCGGCCCCGCGGCTCTGCAACAAGGATCCGCTCACGCTCAAGATGGGCTCGTACGTGATCGAGCTGTTCCCGGCGGCCAAGTTTCTGTTCATGGTGCGGGAACGGGCGGGCCAC]
consensusID : consensus_3699#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 669 fasta sequence
[CCGGACTTCCCCATCCAGCGTCAACTTCTGCTGCTGTGCCCGGTTGTGCATTGTATCGCCTTTCCAGACCGAGAGCAACCATCAGCAACATCTCGCGAGCGAACCATATCGACGCTTTACCTCCTTCCCCCTTTTCTTCCTTCTCTTCTCTCCCTTCTACTCCCGCGGTCGCCAACGGAGCGCCGGCTACGTCAATTTTGCCAATATATCTTCCAACGCGCGGCGCTCATCACTGGAGCGCTCTGCACGTGCCGGGCGGACCGGGGGAACCGATACAGGCCGAATTAATTGCACAAACGCGTTCGTTCCTTTAGCTTTACCCTTTTAACTATCTTAACTAACAGCGCTGAACTGAAACAAACAAAAAACTGAAGAGAAAAAAAAAACATATCGCCTGCGATCGCTTCCGGGACAAAAGCACGCTAAGGAAATATTCCGCAAGCAGTTGAAGAACGCGGTCACAAAGAAAAGCGACTAATACACGCCAAAACCCCGTTCGTTCGTTTGTTGACCGGGTAAGTGGCTAATCTTTTAAAGCTGATAAGCGCCAGAACGCCGCCGCTGTCACTATTGTTTCGGACGCTGGTCCGGGTGCACGTTGACGAAATCGGAACCCGCCGCTTGTCTACACACAAGCCCCGCGAGAGCGGCGTGTTGAATCTTAGCCTC]
[+] EMBL BM611910 [CCGGACTTCCCCATCCAGCGTCAACTTCTGCTGCTGTGCCCGGTTGTGCATTGTATCGCCTTTCCAGACCGAGAGCAACCATCAGCAACATCTCGCGAGCGAACCATATCGACGCTTTACCTCCTTCCCCCTTTTCTTCCTTCTCTTCTCTCCCTTCTACTCCCGCGGTCGCCAACGGAGCGCCGGCTACGTCAATTTTGCCAATATATCTTCCAACGCGCGGCGCTCATCACTGGAGCGCTCTGCACGTGCCGGGCGGACCGGGGGAACCGATACAGGCCGAATTAATTGCACAAACGCGTTCGTTCCTTTAGCTTTACCCTTTTAACTATCTTAACTAACAGCGCTGAACTGAAACAAACAAAAAACTGAAGAGAAAAAAAAAACATATCGCCTGCGATCGCTTCCGGGACAAAAGCACGCTAAGGAAATATTCCGCAAGCAGTTGAAGAACGCGGTCACAAAGAAAAGCGACTAATACACGCCAAAACCCCGTTCGTTCGTTTGTTGACCGGGTAAGTGGCTAATCTTTTAAAGCTGATAAGCGCCAGAACGCCGCCGCTGTCACTATTGTTTCGGACGCTGGTCCGGGTGCACGTTGACGAAATCGGAACCCGCCGCTTGTCTACACACAAGCCCCGCGAGAGCGGCGTGTTGAATCTTAGCCTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3699#0 CCGCCCACGCGTCCGCCCACGCGTCCGATCGCCTGCGATCGCTTCCGGGACAAAAGCACG 60
consensus_3699#1 ------------------------------------------------------------
consensus_3699#0 CTAAGGAAATATTCCGCAAGCAGTTGAAGAACGCGGTCACAAAGAAAAGCGACTAATACA 120
consensus_3699#1 ------------------------------------------------------------
consensus_3699#0 CGCCAAAACCCCGTTCGTTCGTTTGTTGACCGGGTAAGTGGCTAATCTTTTAAAGCTGAT 180
consensus_3699#1 -------------------------------------------------------CCGGA 5
* *
consensus_3699#0 AAGCGCCAGAACGCCGCCGCTGTCACTATTGTTTCGGACGCTGGTCCGGGTGCACGTTGA 240
consensus_3699#1 CTTCCCCATCCAGCGTCAACTTCTGCTGCTGTGCCCGGTTGTGCATTGTATCGCCTTT-- 63
* *** ** * ** ** *** * * ** * * * **
consensus_3699#0 CGAAATCGGAACCCGCCGCTTGT--CTACACACAAGCCCCGCGCACATACGCGAGAGCGG 298
consensus_3699#1 CCAGACCGAGAGCAACCATCAGCAACATCTCGCGAGCGAACCATATCGACGCTTTACCTC 123
* * * ** * * ** * * * * * *** * * **** * *
consensus_3699#0 CGTGTTGAATCTTAGCCTCCTAGGAGAAACCGAA-GCAACCGAAGCGTACTAGAGAAGGT 357
consensus_3699#1 CTTCCCCCTTTTCTTCCTTCTCTTCTCTCCCTTCTACTCCCGCGGTCGCCAACGGAGCGC 183
* * * * *** ** ** * *** * * * ** *
consensus_3699#0 AGACATCATGCGGTTAGTGTTGCGCAACCGCAAGCTCCCGTTGGCCGCCGTCGG--CTGC 415
consensus_3699#1 CGGCTACGT-CAATTTTGCCAATATATCTTCCAACGCGCGGCGCTCATCACTGGAGCGCT 242
* * * * * ** * * * * * * ** * * * ** *
consensus_3699#0 CTGGTCGGGCTGGTGTTGCTCTGGAAATGGGCGGACGTGCGATCGATGTGCTGGGGCGGC 475
consensus_3699#1 CTGCACGTGCCGGGCGGACCGGGGGAACCGATACAGGCCGAATTAAT-TGC-------AC 294
*** ** ** ** * ** ** * * * ** ** *** *
consensus_3699#0 AGCAGCAGCAGTGCCCACAGTGCCGGTGTCATGGTGCGAGATGAACAGACGGCGGAAGGT 535
consensus_3699#1 AAACGCGTTCGTTCCTTTAGCTTTACCCTTTTA--ACTATCTTAACTAACAGCGCTGAAC 352
* ** ** ** ** * * * * * *** ** ***
consensus_3699#0 GGAGGCAACTATCGGTACCATCGGAACATGCCGCTAATATTTTATCGGCGGTGTGCCCCG 595
consensus_3699#1 TGAAACAAACAAAAAACTGAAGAGAAAAAAAA---AACATATCGCCTGCGATCGCTTCCG 409
** *** * * *** * ** ** * * *** * ***
consensus_3699#0 TTCCGGTACCACGCTGATGCGCGCCATGCTAGATGCCCATCCGGAAGTACGCTGCGGTCA 655
consensus_3699#1 GGACAAAAGCACGCTAAGGAA----ATATTCCGCAAGCAGTTG-AAGAACGCGGTCACAA 464
* * ****** * * ** * ** * *** **** * *
consensus_3699#0 GGAAACGCGCGTCATAC-CACGCATCCTGCAGCTGCGCTCCCACTGGATGAAGTCGGAGA 714
consensus_3699#1 AGAAAAGCGACTAATACACGCCAAAACCCCGTTCGTTCGTTTGTTG-ACCGGGTAAGTGG 523
**** *** * **** * * * * * * * ** * ** * *
consensus_3699#0 AGGAATCGGTCCGGCTGGTGGAGGCCGGCATCACGAAGGAGGTGCT---GAACGGGGCGA 771
consensus_3699#1 CTAATCTTTTAAAGCTGATAAGCGCCAGAACGCCGCCGCTGTCACTATTGTTTCGGACGC 583
* * **** * *** * * ** * * ** * ** **
consensus_3699#0 TCGCCCAGTTCTGTCTCGAGATCATTGCCAAGCACGGCGATCCGGCCCCGCGGCTCTGCA 831
consensus_3699#1 TGGTCCGGGTGCACGTTGACGAAATCGGAACCCGCCGCTTGTCTACACACAAGCCCCGCG 643
* * ** * * * ** ** * * * * ** * * * ** * **
consensus_3699#0 ACAAGGATCCGCTCACGCTCAAGATGGGCTCGTACGTGATCGAGCTGTTCCCGGCGGCCA 891
consensus_3699#1 AGAGCGGCGTGTTGAATCTTAGCCTC---------------------------------- 669
* * * * * * ** * *
consensus_3699#0 AGTTTCTGTTCATGGTGCGGGAACGGGCGGGCCAC 926
consensus_3699#1 -----------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||