cluster # 3722

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Anopheles gambiae
cluster # 3722 cluster # 3722 Sequences # 3 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3722#0 length = 679 sequences # 1

consensus_3722#1 length = 628 sequences # 1
consensus_3722#2 length = 567 sequences # 1

consensusID : consensus_3722#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 679
fasta sequence

                              [CCGCGCGTGCCGATAAGACGCGCGCCGCCGCTGTCGCTCCCACAGCGTTCGCGTAGCGCAGATCTTTACCTTTTGGTTTGCTTTCCCGCGCGGTGGGACGGCGGGCTGGTTGTAACCGAGGCAAATAGACGGGCCCCGGCTTTGTGTGGATATCCTCTTCATATTCGGTCGGCCGGTCGGTTCGATATCATCCCCCGGTGTTTAGTGGTGCCGTGCCCAGGTCTGCAACAGTTCGCGCGCTTCGCTCCCTAGCAACGGGTTGGGGCGCATGGGTGCCGTTTCCCGCATTCAACCCCCACCGATGCAACAGGTGTTTGGTGTGCGGCAGAGTGGCCGCACGCACCATCAAATTAGTTGCGCTGGCGATGGTGATGCTGGTATATCGAAAATAAGTGTAAAGTGCTTTACCCACCCAACCACATCACTCACACGGATCGATTAAAAGTGTGCGTAGAGAAAAGGGCACTCTGTGCTGCCGTTGTGTGCTAACACAGTAACGCGTTTCAGTGCTAGTTACAAGAGCGTTACAAGAGCGTTACGGCTGTGCCTGCGTACGTGAATTCTTCAACAAAACGGGCAACGAAATTGATTGAATCAAAACAGAAAGCGCAAGCCATTTAAAGAGCATTCATCTTGCATCGTCAACAAACCATCAACACCACCACCACCCAAAACAGAC]

[+] EMBL BM648127             [CCGCGCGTGCCGATAAGACGCGCGCCGCCGCTGTCGCTCCCACAGCGTTCGCGTAGCGCAGATCTTTACCTTTTGGTTTGCTTTCCCGCGCGGTGGGACGGCGGGCTGGTTGTAACCGAGGCAAATAGACGGGCCCCGGCTTTGTGTGGATATCCTCTTCATATTCGGTCGGCCGGTCGGTTCGATATCATCCCCCGGTGTTTAGTGGTGCCGTGCCCAGGTCTGCAACAGTTCGCGCGCTTCGCTCCCTAGCAACGGGTTGGGGCGCATGGGTGCCGTTTCCCGCATTCAACCCCCACCGATGCAACAGGTGTTTGGTGTGCGGCAGAGTGGCCGCACGCACCATCAAATTAGTTGCGCTGGCGATGGTGATGCTGGTATATCGAAAATAAGTGTAAAGTGCTTTACCCACCCAACCACATCACTCACACGGATCGATTAAAAGTGTGCGTAGAGAAAAGGGCACTCTGTGCTGCCGTTGTGTGCTAACACAGTAACGCGTTTCAGTGCTAGTTACAAGAGCGTTACAAGAGCGTTACGGCTGTGCCTGCGTACGTGAATTCTTCAACAAAACGGGCAACGAAATTGATTGAATCAAAACAGAAAGCGCAAGCCATTTAAAGAGCATTCATCTTGCATCGTCAACAAACCATCAACACCACCACCACCCAAAACAGAC]




>consensus_3722#0
CCGCGCGTGCCGATAAGACGCGCGCCGCCGCTGTCGCTCCCACAGCGTTCGCGTAGCGCA
GATCTTTACCTTTTGGTTTGCTTTCCCGCGCGGTGGGACGGCGGGCTGGTTGTAACCGAG
GCAAATAGACGGGCCCCGGCTTTGTGTGGATATCCTCTTCATATTCGGTCGGCCGGTCGG
TTCGATATCATCCCCCGGTGTTTAGTGGTGCCGTGCCCAGGTCTGCAACAGTTCGCGCGC
TTCGCTCCCTAGCAACGGGTTGGGGCGCATGGGTGCCGTTTCCCGCATTCAACCCCCACC
GATGCAACAGGTGTTTGGTGTGCGGCAGAGTGGCCGCACGCACCATCAAATTAGTTGCGC
TGGCGATGGTGATGCTGGTATATCGAAAATAAGTGTAAAGTGCTTTACCCACCCAACCAC
ATCACTCACACGGATCGATTAAAAGTGTGCGTAGAGAAAAGGGCACTCTGTGCTGCCGTT
GTGTGCTAACACAGTAACGCGTTTCAGTGCTAGTTACAAGAGCGTTACAAGAGCGTTACG
GCTGTGCCTGCGTACGTGAATTCTTCAACAAAACGGGCAACGAAATTGATTGAATCAAAA
CAGAAAGCGCAAGCCATTTAAAGAGCATTCATCTTGCATCGTCAACAAACCATCAACACC
ACCACCACCCAAAACAGAC

consensusID : consensus_3722#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 628
fasta sequence

                              [CAAGAATCCCCCGAGGTTTGCTGTAGAGAAAAGGGCACTCTGTACTGCTGTTGTGTGCTAACACAGTAACGCGTTTCAGTGCTAGTTACAAGAGCGTTACAAAAGCGTTACGACAGTGGCTGCGTACGTGAATTCTTCAGCAAGACGGGCAACGAAATTGATTGAATCAAAACAGAAAGTGCAAGCCATTTAAAGAGCGTTCATCTCGCTTCGTCAACAAACCATCATCACCACCACCACCAAAACAGACCAGTAGCACTAGAGCGTGACGTCATGGCTAGTGGGCTGCTGAAGNGTGGAGCCTCCCGCAACAATGTGTGACTNGGGCTGGTCCCGGGACGGTTGTCCCTTANCAGCTGACAACCTGGCGACTGTGGCAGCCGGCTCGGCAATTGGCGAACGGGGCGGCTCCCTCACACCAAACCTTCCCTCGATGGATCGGATCAGTGNGCCGATACTGACAGCGCCGCAAGTTCAGCTTCCCTGACAACCTGCACTCGACGGCACTGNATCGGNGTNCCCGAGATCGGTCACGGGATGGNTTACAGGCATGGGCGGNTCGTACACTGTCCGCTCCAGTACCGCACTGTCCGCCGGAGGCGGTGAGCAACGTGAGTGAAGTCGTGAC]

[+] EMBL AL692954             [CAAGAATCCCCCGAGGTTTGCTGTAGAGAAAAGGGCACTCTGTACTGCTGTTGTGTGCTAACACAGTAACGCGTTTCAGTGCTAGTTACAAGAGCGTTACAAAAGCGTTACGACAGTGGCTGCGTACGTGAATTCTTCAGCAAGACGGGCAACGAAATTGATTGAATCAAAACAGAAAGTGCAAGCCATTTAAAGAGCGTTCATCTCGCTTCGTCAACAAACCATCATCACCACCACCACCAAAACAGACCAGTAGCACTAGAGCGTGACGTCATGGCTAGTGGGCTGCTGAAGNGTGGAGCCTCCCGCAACAATGTGTGACTNGGGCTGGTCCCGGGACGGTTGTCCCTTANCAGCTGACAACCTGGCGACTGTGGCAGCCGGCTCGGCAATTGGCGAACGGGGCGGCTCCCTCACACCAAACCTTCCCTCGATGGATCGGATCAGTGNGCCGATACTGACAGCGCCGCAAGTTCAGCTTCCCTGACAACCTGCACTCGACGGCACTGNATCGGNGTNCCCGAGATCGGTCACGGGATGGNTTACAGGCATGGGCGGNTCGTACACTGTCCGCTCCAGTACCGCACTGTCCGCCGGAGGCGGTGAGCAACGTGAGTGAAGTCGTGAC]




>consensus_3722#1
CAAGAATCCCCCGAGGTTTGCTGTAGAGAAAAGGGCACTCTGTACTGCTGTTGTGTGCTA
ACACAGTAACGCGTTTCAGTGCTAGTTACAAGAGCGTTACAAAAGCGTTACGACAGTGGC
TGCGTACGTGAATTCTTCAGCAAGACGGGCAACGAAATTGATTGAATCAAAACAGAAAGT
GCAAGCCATTTAAAGAGCGTTCATCTCGCTTCGTCAACAAACCATCATCACCACCACCAC
CAAAACAGACCAGTAGCACTAGAGCGTGACGTCATGGCTAGTGGGCTGCTGAAGNGTGGA
GCCTCCCGCAACAATGTGTGACTNGGGCTGGTCCCGGGACGGTTGTCCCTTANCAGCTGA
CAACCTGGCGACTGTGGCAGCCGGCTCGGCAATTGGCGAACGGGGCGGCTCCCTCACACC
AAACCTTCCCTCGATGGATCGGATCAGTGNGCCGATACTGACAGCGCCGCAAGTTCAGCT
TCCCTGACAACCTGCACTCGACGGCACTGNATCGGNGTNCCCGAGATCGGTCACGGGATG
GNTTACAGGCATGGGCGGNTCGTACACTGTCCGCTCCAGTACCGCACTGTCCGCCGGAGG
CGGTGAGCAACGTGAGTGAAGTCGTGAC

consensusID : consensus_3722#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 567
fasta sequence

                              [CAACAAACCATCATCACCACCACCACCAAAACAGACCAGTAGCACTAGAGCGTGACGTCATGGCTAGTGGGCTGCTGAAGGTGGAGCCTCCCGCCAACAATGGGACGGGGTTGGTCCCGGGACGGTTGTCCCTTAGCAGCGACAACCTGGCGACGGGCAGCCGGCTCGGCAATGGCGAACGGGGCGGCTCCCTCACACCAAACCTTCCCTCGATGGATCGGCTCAGTGCGCCGATACTGACGCGCCGCAAGTTCAGCTTCCCTGCCAACCTGCACTCGACGGCACTGCTCGGGTTCCCCGAGATCGGTCACCGGGATGGCTTCGGCATGGGCGGCTCGTCACTGTCCGCCTCCAGTACCGCACTGTCCGCCCGGAGGCGGCTGAGCAACGTGAGTGACGTCGTGACACGCAAGCTCTCCAGCACGATCGGCTGGAAGCAACCGGTCCTACCGTCCCAGGACATCATCACCCAGGGCAAGTGTCTGTGCGGGCAGTACATTCGGTGCCGGTTGAAGCGATCCGGTGTGTTTAACCGGAAGCTGGGGCTGCAGCGCATCCGGAGCATCG]

[+] EMBL BX618993             [CAACAAACCATCATCACCACCACCACCAAAACAGACCAGTAGCACTAGAGCGTGACGTCATGGCTAGTGGGCTGCTGAAGGTGGAGCCTCCCGCCAACAATGGGACGGGGTTGGTCCCGGGACGGTTGTCCCTTAGCAGCGACAACCTGGCGACGGGCAGCCGGCTCGGCAATGGCGAACGGGGCGGCTCCCTCACACCAAACCTTCCCTCGATGGATCGGCTCAGTGCGCCGATACTGACGCGCCGCAAGTTCAGCTTCCCTGCCAACCTGCACTCGACGGCACTGCTCGGGTTCCCCGAGATCGGTCACCGGGATGGCTTCGGCATGGGCGGCTCGTCACTGTCCGCCTCCAGTACCGCACTGTCCGCCCGGAGGCGGCTGAGCAACGTGAGTGACGTCGTGACACGCAAGCTCTCCAGCACGATCGGCTGGAAGCAACCGGTCCTACCGTCCCAGGACATCATCACCCAGGGCAAGTGTCTGTGCGGGCAGTACATTCGGTGCCGGTTGAAGCGATCCGGTGTGTTTAACCGGAAGCTGGGGCTGCAGCGCATCCGGAGCATCG]




>consensus_3722#2
CAACAAACCATCATCACCACCACCACCAAAACAGACCAGTAGCACTAGAGCGTGACGTCA
TGGCTAGTGGGCTGCTGAAGGTGGAGCCTCCCGCCAACAATGGGACGGGGTTGGTCCCGG
GACGGTTGTCCCTTAGCAGCGACAACCTGGCGACGGGCAGCCGGCTCGGCAATGGCGAAC
GGGGCGGCTCCCTCACACCAAACCTTCCCTCGATGGATCGGCTCAGTGCGCCGATACTGA
CGCGCCGCAAGTTCAGCTTCCCTGCCAACCTGCACTCGACGGCACTGCTCGGGTTCCCCG
AGATCGGTCACCGGGATGGCTTCGGCATGGGCGGCTCGTCACTGTCCGCCTCCAGTACCG
CACTGTCCGCCCGGAGGCGGCTGAGCAACGTGAGTGACGTCGTGACACGCAAGCTCTCCA
GCACGATCGGCTGGAAGCAACCGGTCCTACCGTCCCAGGACATCATCACCCAGGGCAAGT
GTCTGTGCGGGCAGTACATTCGGTGCCGGTTGAAGCGATCCGGTGTGTTTAACCGGAAGC
TGGGGCTGCAGCGCATCCGGAGCATCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3722#1      CAAGAATCCCCCGAGGTTTGCTGTAGAGAAAAGGGCACTCTGTACTGCTGTTGTGTGCTA 60
consensus_3722#2      ------------------------------------------------------------
consensus_3722#0      ------------------------------------------------------------
                                                                                  

consensus_3722#1      ACACAGTAACGCGTTTCAGTGCTAGTTACAAGAGCGTTACAAAAGCGTTACGACAGTGGC 120
consensus_3722#2      ------------------------------------------------------------
consensus_3722#0      ------------------------------------------------------------
                                                                                  

consensus_3722#1      TGCGTACGTGAATTCTTCAGCAAGACGGGCAACGAAATTGATTGAATCAAAACAGAAAGT 180
consensus_3722#2      ------------------------------------------------------------
consensus_3722#0      ------------------------------------------------------------
                                                                                  

consensus_3722#1      GCAAGCCATTTAAAGAGCGTTCATCTCGCTTCGTCAACAAAC-CATCATCACCACCACCA 239
consensus_3722#2      ----------------------------------CAACAAAC-CATCATCACCACCACCA 25
consensus_3722#0      ---------------------CCGCGCGTGCCGATAAGACGCGCGCCGCCGCTGTCGCTC 39
                                                         ** *  * *  *  * *   * *  

consensus_3722#1      CCAAAACAGACCAGTAGCACTAGAGCGTGACGTCATGGCTAGTGGGCT---GCTGAAGNG 296
consensus_3722#2      CCAAAACAGACCAGTAGCACTAGAGCGTGACGTCATGGCTAGTGGGCT---GCTGAAGG- 81
consensus_3722#0      CCACAGCGTTCGCGTAGCGC-AGATCTTTACCTTTTGGTTTGCTTTCCCGCGCGGTGGGA 98
                      *** * *   *  ***** * *** * * ** *  *** * *    *    ** *  *  

consensus_3722#1      TGG--AGCCTCCCGC-AACAATGTG--TGACTNGGGCTGGTCCCGGGACGGTTGTCC-CT 350
consensus_3722#2      TGG--AGCCTCCCGCCAACAATG-----GGACGGGGTTGGTCCCGGGACGGTTGTCC-CT 133
consensus_3722#0      CGGCGGGCTGGTTGTAACCGAGGCAAATAGACGGGCCCCGGCTTTGTGTGGATATCCTCT 158
                       **   **     *  * * * *          **    * *   *   ** * *** **

consensus_3722#1      TANCAGCTGACAACCTGGCGACTGTGGCAGC-CGGCTCGGCAATTGGCGA-ACGGGGC-- 406
consensus_3722#2      TAGCAGC-GACAACCTGGCGACGG--GCAGC-CGGCTCGGCAAT-GGCGA-ACGGGGC-- 185
consensus_3722#0      TCATATTCGGTCGGCCGGTCGGTTCGATATCATCCCCCGGTGTTTAGTGGTGCCGTGCCC 218
                      *   *   *     * **          * *    * ***   *  * *   * * **  

consensus_3722#1      GGCTCCCTCACACCAAAC---CTTCCCTCGATGG-ATCGGATCAGTGNGCCGATACTGAC 462
consensus_3722#2      GGCTCCCTCACACCAAAC---CTTCCCTCGATGG-ATCGGCTCAGTGCGCCGATACTGAC 241
consensus_3722#0      AGGTCTGCAACAGTTCGCGCGCTTCGCTCCCTAGCAACGGGTTGGGGCGC--ATGGGTGC 276
                       * **    ***     *   **** ***  * * * *** *  * * **  **     *

consensus_3722#1      AGCGCCGCAAGTTCAGCTTCC-CTGA--CAACCTGCACT-------CGACGGCACTGNAT 512
consensus_3722#2      -GCGCCGCAAGTTCAGCTTCC-CTGC--CAACCTGCACT-------CGACGGCACTGC-T 289
consensus_3722#0      CGTTTCCCGCATTCAACCCCCACCGATGCAACAGGTGTTTGGTGTGCGGCAGAGTGGCCG 336
                       *   * *   **** *  ** * *   ****  *   *       ** * *    *   

consensus_3722#1      CGGNGTNCCCGAGATCGGTCAC----GGGATGGNT-TACAGGCATG--GGCGGNTCGTAC 565
consensus_3722#2      CGGGTTCCCCGAGATCGGTCACC---GGGATGGCT-TC--GGCATG--GGCGGCTCGT-C 340
consensus_3722#0      CACGCACCATCAAATTAGTTGCGCTGGCGATGGTGATGCTGGTATATCGAAAATAAGTGT 396
                      *      *   * **  **  *    * *****   *   ** **   *       **  

consensus_3722#1      ACTGTCCGC-TCCAGT---ACCGCACTGTCCGCC-GGAGGCGG-TGAGCAACGTGAGT-G 618
consensus_3722#2      ACTGTCCGCCTCCAGT---ACCGCACTGTCCGCCCGGAGGCGGCTGAGCAACGTGAGT-G 396
consensus_3722#0      AAAGTGCTTTACCCACCCAACCACATCACTCACACGGAT-CGATTAAA-AGTGTGCGTAG 454
                      *  ** *    **      *** **     * *  ***  **  * *  *  *** ** *

consensus_3722#1      AAGTCGTGAC-------------------------------------------------- 628
consensus_3722#2      ACGTCGTGACACGCAAGCTCTCCAGCACGATCGGCTGGAAGCAACCGGTCCTACCGTC-- 454
consensus_3722#0      AGAAAAGGGCACTCTGTGCTGCCGTTGTGTGCTAACACA-GTAACGCGTTTCAGTGCTAG 513
                      *      * *                                                  

consensus_3722#1      ------------------------------------------------------------
consensus_3722#2      CCAGGACATCATCACCCAGGGCAAGTGTCTGTGCGGGCAGTACATTCGGTGCCGGTTGAA 514
consensus_3722#0      TTACAAGAGCGTTACAAGAGCGTTACGGCTGTGCCTGC-GTACGTGAATTCTTCAACAAA 572
                                                                                  

consensus_3722#1      ------------------------------------------------------------
consensus_3722#2      GCG---ATCCGGTGTGTTTAACCGGAAGCTGGGGCTGCAGCGCATCCG--GAGCATCG-- 567
consensus_3722#0      ACGGGCAACGAAATTGATTGAATCAAAACAGAAAGCGCAAGCCATTTAAAGAGCATTCAT 632
                                                                                  

consensus_3722#1      -----------------------------------------------
consensus_3722#2      -----------------------------------------------
consensus_3722#0      CTTGCATCGTCAACAAACCATCAACACCACCACCACCCAAAACAGAC 679