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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3790#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 695 fasta sequence
[GCAGATCGCCGAGGTTAAAGAGAGATATATAGAAAGAGCAGAATAGATCGAAAGGAATGTTCGTGTGATTCGAAGAACGGNGATTGATAGTCATAGTTTGTATATCAAAAAAACACAAACCCTCAATTCACAATTATGCTGCAGCGCATATTGCGAGCAACCGGGAGAGCCCACGGGTGCGCACACAGATGCGCGAATAGCGTGTAAACACGATATCATTAAGTATACGATATTTATCCACCATATTACCATTGAACGCTCCGGGTAGCTTCGAGGTTACTGTGTACACTGTNATCGTGTTATNTATTGTGTANCGTGTCATATTTTACTATGGTTATATNAGTTATATCGTTCATCTAGCAAGCAAAGAATGTTTTNATCATATATCNATCTATCTTATATACTGGTAGTTAACTATATCTCTCNCGATNTCAATGTTCTCTCACATCAGTNCGTAGTATACGTTCTTGGCAGTNACGTATATACACGTATCGATACTTATAGGTACGCGACCCCAATCTATTGCGAAGGTGCATATCAACTCTATATNCAATATACTTCCGGTTACTTCTCTNTATACCGNTNTGATTCGTNGCGTACGAAGCATGTGCCGCATGCGTGCAACCAGCTGTATCGTGAAGTTCACCGAGTTGNANNAAAATATAGGAGACNNAANACTTATGAAGGAACGNCTC]
[+] EMBL AL693984 [GCAGATCGCCGAGGTTAAAGAGAGATATATAGAAAGAGCAGAATAGATCGAAAGGAATGTTCGTGTGATTCGAAGAACGGNGATTGATAGTCATAGTTTGTATATCAAAAAAACACAAACCCTCAATTCACAATTATGCTGCAGCGCATATTGCGAGCAACCGGGAGAGCCCACGGGTGCGCACACAGATGCGCGAATAGCGTGTAAACACGATATCATTAAGTATACGATATTTATCCACCATATTACCATTGAACGCTCCGGGTAGCTTCGAGGTTACTGTGTACACTGTNATCGTGTTATNTATTGTGTANCGTGTCATATTTTACTATGGTTATATNAGTTATATCGTTCATCTAGCAAGCAAAGAATGTTTTNATCATATATCNATCTATCTTATATACTGGTAGTTAACTATATCTCTCNCGATNTCAATGTTCTCTCACATCAGTNCGTAGTATACGTTCTTGGCAGTNACGTATATACACGTATCGATACTTATAGGTACGCGACCCCAATCTATTGCGAAGGTGCATATCAACTCTATATNCAATATACTTCCGGTTACTTCTCTNTATACCGNTNTGATTCGTNGCGTACGAAGCATGTGCCGCATGCGTGCAACCAGCTGTATCGTGAAGTTCACCGAGTTGNANNAAAATATAGGAGACNNAANACTTATGAAGGAACGNCTC]
consensusID : consensus_3790#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 682 fasta sequence
[CCGATCAAGCACAGGCTGCAGGCTGTACCAAGTAGCGGGA--AAGCATTACTAATTCATTATACTATT-TTAAGCGATCATTACTAACAACACCTTACTTTTACTATTTGGAGAGAATCAACAGAGAGAGAGATATATATATAGAAAGAGAGAATAAGATTCGAAAGGAATGTTCGTGTGATTCGAAGAACGGCGATTGATAGTCATAGTTTTTATATCAAAAAAACACAAACCCTCAATTCACAATTTGCTGCAGCTCATATTGCGAGCAACCGGGAGAGCCCACGGGTGCGCACACAGATGCGCGAATAGCGTGTAAACACGATTCATTTGTTACGATTTTATCCACCATTTTACCATTGAACGCTCCGGGTAGCTTCGAGGTTTCTGTGTTTTCTGTTATCGTGTTAATTATTGTCTTTCGTGTCATTTTTAGTATGTTTTTTTATTGTTTTTTCAACAAGAATGTTTT-TTCTTCTTTTATGTGTTACTGTTTTTGATTTCATTGTTTTTTTCTGTTGTTGTTACGTTCTTTCGTTACGTTTTACGTTCATTTCGTT---TTTGGTT-CGCCTCCCACTCCCTGCGAAGGTGATATCAACTCTTTTTTTTAATATACTTCC-GTT-T--CTT-TC-TCTTATCC---GTTTT---TATTGGT--GCGTACGAACGTGTGCCGCATGCGTGCAAC-AGCTGT]
[+] EMBL BM623634 [CCGATCAAGCACAGGCTGCAGGCTGTACCAAGTAGCGGGA AAGCATTACTAATTCATTATACTATT TTAAGCGATCATTACTAACAACACCTTACTTTTACTATTTGGAGAGAATCAACAGAGAGAGAGATATATATATAGAAAGAGAGAATAAGATTCGAAAGGAATGTTCGTGTGATTCGAAGAACGGCGATTGATAGTCATAGTTTTTATATCAAAAAAACACAAACCCTCAATTCACAATTTGCTGCAGCTCATATTGCGAGCAACCGGGAGAGCCCACGGGTGCGCACACAGATGCGCGAATAGCGTGTAAACACGATTCATTTGTTACGATTTTATCCACCATTTTACCATTGAACGCTCCGGGTAGCTTCGAGGTTTCTGTGTTTTCTGTTATCGTGTTAATTATTGTCTTTCGTGTCATTTTTAGTATGTTTTTTTATTGTTTTTTCAACAAGAATGTTTT TTCTTCTTTTATGTGTTACTGTTTTTGATTTCATTGTTTTTTTCTGTTGTTGTTACGTTCTTTCGTTACGTTTTACGTTCATTTCGTT TTTGGTT CGCCTCCCACTCCCTGCGAAGGTGATATCAACTCTTTTTTTTAATATACTTCC GTT T CTT TC TCTTATCC GTTTT TATTGGT GCGTACGAACGTGTGCCGCATGCGTGCAAC AGCTGT]
[+] EMBL BX467953 [ gCAAGAATCGGCACGATGGA TACTAATTCATTATACTATTCTTAAGCGATCATTACTAACAACACCTTACTTTTACTATTTGGAGAGAATCAACAGAGAGAGAGATATATATATAGAAAGAGAGAATAAGATTCGAAAGGAATGTTCGTGTGATTCGAAGAACGGCGATTGATAGTCATAGTTTTTATATCAAAAAAACACAAACCCTCAATTCACAATTTGCTGCAGCGCATATTGCGAGCAACCGGGAGAGCCCACGGGTGCGCACACAGATGCGCGAATAGCGTGTAAACACGATTCATTTGTTACGATTTTATCCACCATTTTACCATTGAACGCTCCGGGTAGCTTCGAGGTTTCTGTGTTTTCTGTTATCGTGTTAATTATTGTCTTTCGTGTCATTTTTAGTATG TTTTTTATTGTTTTTTCAACAAGAATGTTTTGTTCTTCTTTTATGTGTTACTGTTTTTGATTTCATTG TTTTTCTGTTGTTGTTACGTTCTTTCGTTACGTTTTACGTTCATTTCGTTANAATAGGTTACGCCTCCCACTCCCTGCGAAGGTGATATCAACTC TTAAGATAATATACTTCCGGTTGTGCCTTNTCGTCTTATCCGGGGTGATAGACATTCGTTAGCGTACGAACGTGTGCCGCATGCGTGCAACAAGCT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3790#0 ------------------------------------------------------------
consensus_3790#1 CCGATCAAGCACAGGCTGCAGGCTGTACCAAGTAGCGGGAAAGCATTACTAATTCATTAT 60
consensus_3790#0 -------------------------------------------------GCAGATCGCCG 11
consensus_3790#1 ACTATTTTAAGCGATCATTACTAACAACACCTTACTTTTACTATTTGGAGAGAATCAACA 120
* *** *
consensus_3790#0 AGGTTAAAGAGAGATATATAGAAAGAGCAGAATAGAT-CGAAAGGAATGTTCGTGTGATT 70
consensus_3790#1 GAGAGAGAGATATATATATAGAAAGAGAGAATAAGATTCGAAAGGAATGTTCGTGTGATT 180
* * *** * ************** * **** **********************
consensus_3790#0 CGAAGAACGGNGATTGATAGTCATAGTTTGTATATCAAAAAAACACAAACCCTCAATTCA 130
consensus_3790#1 CGAAGAACGGCGATTGATAGTCATAGTTTTTATATCAAAAAAACACAAACCCTCAATTCA 240
********** ****************** ******************************
consensus_3790#0 CAATTATGCTGCAGCGCATATTGCGAGCAACCGGGAGAGCCCACGGGTGCGCACACAGAT 190
consensus_3790#1 CAATT-TGCTGCAGCTCATATTGCGAGCAACCGGGAGAGCCCACGGGTGCGCACACAGAT 299
***** ********* ********************************************
consensus_3790#0 GCGCGAATAGCGTGTAAACACGATATCATTAAGTATACGATATTTATCCACCATATTACC 250
consensus_3790#1 GCGCGAATAGCGTGTAAACACGAT-TCATTTGTTA--CGAT-TTTATCCACCATTTTACC 355
************************ ***** ** **** ************ *****
consensus_3790#0 ATTGAACGCTCCGGGTAGCTTCGAGGTTACTGTGTACACTGTNATCGTGTTATNTATTGT 310
consensus_3790#1 ATTGAACGCTCCGGGTAGCTTCGAGGTTTCTGTGTTTTCTGTTATCGTGTTAATTATTGT 415
**************************** ****** **** ********* ******
consensus_3790#0 GTANCGTGTCATATTTTACTATGGTTATATNAGTTATATCGTTCATCTAGCAAGCAAAGA 370
consensus_3790#1 CTTTCGTGTCAT-TTTTAGTATGTTT-------TTTTATTGTTTTTTCAACAA-----GA 462
* ******** ***** **** ** ** *** *** * * *** **
consensus_3790#0 ATGTTTTNATCATATATCNATCTATCTTATATACTGGTAGTTAACTATATCTCTCNCGAT 430
consensus_3790#1 ATGTTTTT--------TCT---TCTTTTATGTGTT--------ACTGT-----TTTTGAT 498
******* ** * * **** * * *** * * ***
consensus_3790#0 NTCAATGTTCTCTCACATCAGTNCGTAGTATACGTTCTTGGCAGTNACGTATATACACGT 490
consensus_3790#1 TTCATTGTTTTTTTCTGTTGTTGT------TACGTTCTT--TCGTTACGTTT-TACGTTC 549
*** **** * * * * ********* ** **** * ***
consensus_3790#0 ATCGATACTTATAGGTACGCGACCCCAATCTATTGCGAAGGTGCATATCAACTCTATATN 550
consensus_3790#1 ATT--TCGTTTTTGGTTCGC--CTCCCACTCCCTGCGAAGGTG-ATATCAACTCTTTTTT 604
** * ** * *** *** * ** * ********** *********** * *
consensus_3790#0 C-AATATACTTCCGGTTACTTCTCTNTATACCGNTNTGATTCGTNGCGTACGAAGCATGT 609
consensus_3790#1 TTAATATACTTCCGTTTCTTTCTCTT-AT-CCGTTTTTATT-GGTGCGTACGAA-CGTGT 660
************ ** ****** ** *** * * *** * ********* * ***
consensus_3790#0 GCCGCATGCGTGCAACCAGCTGTATCGTGAAGTTCACCGAGTTGNANNAAAATATAGGAG 669
consensus_3790#1 GCCGCATGCGTGCAAC-AGCTGT------------------------------------- 682
**************** ******
consensus_3790#0 ACNNAANACTTATGAAGGAACGNCTC 695
consensus_3790#1 --------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||