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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3911#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 614 fasta sequence
[CCGCAGAGTGTGTGCTTTTCCTTCCATTTATAGTGCAGACGCATACCCACCGCCCAAGAAAGAAAAACAGTGCTCATTTTCCCGACGTACACACTAGCGTGCCGCTTCCCGATTCCTTTACCCACCCGCTCGGGGGAGGGGCAGGGCTCGGATCGTTCGTGCCAAGTGTACCATCCCGCACGGCGCAACAATGTCCACCAACAGCGGCGGCGGAAGCGTTGGCAGCGGGGCACACTTCCCCGCGAGTGCAGCTGCTGCACCTATCCACGCGCGTCCGCAGCCGGGAGGAGCAGGAGCTGGAGCGGCTGCGGCAAACGCCAACGCAAACGCTCATCAACTGCTTCATGCTCGGGTGGTTCATCATCGGTTCGTTCTGGATCTACCAGATCTACGAGCCGAACTACGACCCGGCGCTCGGCAAGTACTGCAACAAATCCCTGTACCTGTTCACCTTCTGGCTGATCACCTCCGTCTACATGATGCTGTTCGTCGTCACGATCGTGCTGTGCAGCGTTAGCATCATAAGCCTTTGCTTTCACCGGCAAACCTAGCCGGTGGTGCTGCTGCCGTCGCCCCACCTGACCCACCATGCGCAACGCTAGCGGGCAGGTGCG]
[+] EMBL BM600843 [CCGCAGAGTGTGTGCTTTTCCTTCCATTTATAGTGCAGACGCATACCCACCGCCCAAGAAAGAAAAACAGTGCTCATTTTCCCGACGTACACACTAGCGTGCCGCTTCCCGATTCCTTTACCCACCCGCTCGGGGGAGGGGCAGGGCTCGGATCGTTCGTGCCAAGTGTACCATCCCGCACGGCGCAACAATGTCCACCAACAGCGGCGGCGGAAGCGTTGGCAGCGGGGCACACTTCCCCGCGAGTGCAGCTGCTGCACCTATCCACGCGCGTCCGCAGCCGGGAGGAGCAGGAGCTGGAGCGGCTGCGGCAAACGCCAACGCAAACGCTCATCAACTGCTTCATGCTCGGGTGGTTCATCATCGGTTCGTTCTGGATCTACCAGATCTACGAGCCGAACTACGACCCGGCGCTCGGCAAGTACTGCAACAAATCCCTGTACCTGTTCACCTTCTGGCTGATCACCTCCGTCTACATGATGCTGTTCGTCGTCACGATCGTGCTGTGCAGCGTTAGCATCATAAGCCTTTGCTTTCACCGGCAAACCTAGCCGGTGGTGCTGCTGCCGTCGCCCCACCTGACCCACCATGCGCAACGCTAGCGGGCAGGTGCG]
consensusID : consensus_3911#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 614 fasta sequence
[CCGCCCACGCGTCCGATCATTTTCATGTTTTGGGGAAACGAAAAGAAAAACAACAAACGAAACAACAACCGAACTGCAGAGACGAGAGAGAGTGCCACAGAGTGTGTGCTTTTCCTTCCATTTATAGTGCAGACGCATACCCACCGCCCAAGAAAGAAAAACAGTGCTCATTTTCCCGACGTACACACTAGTGTGCCGCTTCCCGATTCCTTTACCCACCCGCTCGGGGGAGGGGCAGGGCTCGGATCGTTCGTGCCAAGTGTACCATCCCGCACGGCGCAACAATGTCCACCAACAGCGGCGGCGGAAGCGTTGGCAGCGGGGCACACTTCCCCGCGAGTGCAGCCGTATCGAACTACCACGACATCTACGTTCAACAGCAACCTAGCGGCGCCGGTGGCCACGACGAGCTGGACAGCATAAACAGCATCGCCCCGGTACCACCACCACCCGTTTCGCAACCCACAGTGATAGTGGCGGGTTTACAGTCGTCACAGGCGAAGGGTGGTGGGTTGGTTGGTGGCCCTGCGAGCAGCAGTTCGCTCTACTTCCCGACCGCCCCCCCGCCCGTCCCGTACAGTGAGCTGGGCGAACCGAGCGGCAACGTGGGGCGG]
[+] EMBL BM648994 [CCGCCCACGCGTCCGATCATTTTCATGTTTTGGGGAAACGAAAAGAAAAACAACAAACGAAACAACAACCGAACTGCAGAGACGAGAGAGAGTGCCACAGAGTGTGTGCTTTTCCTTCCATTTATAGTGCAGACGCATACCCACCGCCCAAGAAAGAAAAACAGTGCTCATTTTCCCGACGTACACACTAGTGTGCCGCTTCCCGATTCCTTTACCCACCCGCTCGGGGGAGGGGCAGGGCTCGGATCGTTCGTGCCAAGTGTACCATCCCGCACGGCGCAACAATGTCCACCAACAGCGGCGGCGGAAGCGTTGGCAGCGGGGCACACTTCCCCGCGAGTGCAGCCGTATCGAACTACCACGACATCTACGTTCAACAGCAACCTAGCGGCGCCGGTGGCCACGACGAGCTGGACAGCATAAACAGCATCGCCCCGGTACCACCACCACCCGTTTCGCAACCCACAGTGATAGTGGCGGGTTTACAGTCGTCACAGGCGAAGGGTGGTGGGTTGGTTGGTGGCCCTGCGAGCAGCAGTTCGCTCTACTTCCCGACCGCCCCCCCGCCCGTCCCGTACAGTGAGCTGGGCGAACCGAGCGGCAACGTGGGGCGG]
[+] EMBL BM628377 [ ccgCAAGAAAGAAAAACAGTGCTCATTTTCCCGACGTACACACTAGTGTGCCGCTTCCCGATTCCTTTACCCACCCGCTCGGGGGAGGGGCAGGGCTCGGATCGTTCGTGCCAAGTGTACCATCCCGCACGGCGCAACAATGTCCACCAACAGCGGCGGCGGAAGCGTTGGCAGCGGGGCACACTTCCCCGCGAGTGCAGCCGTATCGAACTACCACGACATCTACGTTCAACAGCAACCTAGCGGCGCCGTTGGCCACGACGAGCTGGACAGCATAAACAGCATCGCCCCGGTACCACCACCACCCGTTTCGCAACCCACAGTGATAGTGGCGGGTCTACAGTCGTCACAGGCGA GG GGTGG TGGTGGCCCTCCGAGCACCAGTTCGCTCTACTTCCCGACCGCCCCCCCGCCCGTCCCGTACAGTGAGCTGGGCGAACCG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3911#0 ------------------------------------------------------------
consensus_3911#1 CCGCCCACGCGTCCGATCATTTTCATGTTTTGGGGAAACGAAAAGAAAAACAACAAACGA 60
consensus_3911#0 ----------------------------------CCGCAGAGTGTGTGCTTTTCCTTCCA 26
consensus_3911#1 AACAACAACCGAACTGCAGAGACGAGAGAGAGTGCCACAGAGTGTGTGCTTTTCCTTCCA 120
** ***********************
consensus_3911#0 TTTATAGTGCAGACGCATACCCACCGCCCAAGAAAGAAAAACAGTGCTCATTTTCCCGAC 86
consensus_3911#1 TTTATAGTGCAGACGCATACCCACCGCCCAAGAAAGAAAAACAGTGCTCATTTTCCCGAC 180
************************************************************
consensus_3911#0 GTACACACTAGCGTGCCGCTTCCCGATTCCTTTACCCACCCGCTCGGGGGAGGGGCAGGG 146
consensus_3911#1 GTACACACTAGTGTGCCGCTTCCCGATTCCTTTACCCACCCGCTCGGGGGAGGGGCAGGG 240
*********** ************************************************
consensus_3911#0 CTCGGATCGTTCGTGCCAAGTGTACCATCCCGCACGGCGCAACAATGTCCACCAACAGCG 206
consensus_3911#1 CTCGGATCGTTCGTGCCAAGTGTACCATCCCGCACGGCGCAACAATGTCCACCAACAGCG 300
************************************************************
consensus_3911#0 GCGGCGGAAGCGTTGGCAGCGGGGCACACTTCCCCGCGAGTGCAGCTGCTGCACCTATCC 266
consensus_3911#1 GCGGCGGAAGCGTTGGCAGCGGGGCACACTTCCCCGCGAGTGCAGCCGTATCGAACTACC 360
********************************************** * * **
consensus_3911#0 ACGCGCGTCCGCAGCCGGGAGGAGCAGGAGCTGGAGCGGCTGCGGCAAACGCCAACGCAA 326
consensus_3911#1 ACG-ACATCTACGTTCAACAGCAAC-----CTAGCGGCGCCGGTGGCCACGACGAGCTGG 414
*** * ** * * ** * * ** * * ** * * *** * *
consensus_3911#0 ACGCTCATCAACTGCTTCATGCTCGGGTGGTTCATCATCGGTTCGTTCTGGATCTACCAG 386
consensus_3911#1 ACAG-CATAAACAGCATC--GCCCCGGTA--CCACCACCA-CCCGTTTCGCAACCCACAG 468
** *** *** ** ** ** * *** ** ** * **** * * * ***
consensus_3911#0 ATCTACGAGCCGAACTACGACCCGGCGCTCGGCAAGTACTGCAACAAATCCCTGTACCTG 446
consensus_3911#1 TGATAGTGGCGGGTTTACAGTC--GTCACAGGCGA--AGGGTGGTGGGT-----TGGTTG 519
** ** * *** * * *** * * * * * **
consensus_3911#0 TTCACCTTCTGGCTGATCACCTCCGTCTACATGATGCTGTTCGTCGTCACGATCGTGCTG 506
consensus_3911#1 GTGGCCCTGCGAGCAG-CAGTTCGCTCTACTTC---CCGACCGCCCCCCCGCCCGTCCCG 575
* ** * * ** ** ***** * * * ** * * ** *** * *
consensus_3911#0 TGCAGCGTTAGCATCATAAGCCTTTGCTTTCACCGGCAAACCTAGCCGGTGGTGCTGCTG 566
consensus_3911#1 TACAGTG--AGCTGGGCGAACCG--------AGCGGCAACGTGGGGCGG----------- 614
* *** * *** * ** * ****** * ***
consensus_3911#0 CCGTCGCCCCACCTGACCCACCATGCGCAACGCTAGCGGGCAGGTGCG 614
consensus_3911#1 ------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||