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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4075#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 937 fasta sequence
[ACCAAAACAAAAAATCACAACAAACTGGTGGTAAATGATTCCACACGCAATATTTCTTTTATTTTTTGTTGAGTTCAACACAACACAAAACATCACATAATGGTAATCCGGAAGTACCTTTGTTCGGCCTTCTCCTCACTCATCTCTGCCCGTTGTCTTTCTAGCGTAAAAGCCTCGTGCCACAGCGATGCACACCGTCGAATGCCGTTCACTCGCCGTTCAAAAGCCCGCTTTCGGCACAAAAGCGCCAGCGCGGAATGCCGCAAGCGATGGCACGGGTGTGGCGCGATGGGCAGAAGAAACCGTGCTTTATCTACCGGCTGCTAGCGACCGGCACGATCGAGGAGAAGATTTTCCAGCGCCAAACGCACAAAAAAGCCCTCTCGACGACGGTGGTGGACAATGCGGAGGACGGCGAGCGGCACTTCACGCAGGACGATCTGAAGGACCTGTTCAAGTTGGACGAGCAGACGCGCTCCGACACGCACGACATCTTCCGCTGCAAGCTG-GCACCAATGGGGTGCAGATGAAGCTGCCGCCGGACGACAGTTACTGCATGTCCGATCTGGCCCACTGGTATCACTGCGCGAACAATAAGGGCATCCCGGACGATATACTGTCCAAATCGTGGGACATTACGCGGTGCGTGTCGTTCGTGTTTCACCACCGGTCGAACTCGGCCGTCGTGGAGCAGCAGCTGGCGGA-CAGCGGCGCCA-CAGGGCTCTGGCCAAGGAGCGGGAGGAAAAGGAGGAGGAAGAAGAGGAGGAGGAGGATAAGGAAAACAAAGGGTACAACACGGAAGGGGAAGAGGAGGAGGAGGAGCCGGAAGATGATGAAAAGGATAAAGATTTTGTGTTGTAGTGTGTAACACGGCGCCGCACATTCGCCGCTAATTGGGCACGATGTAAATTTTTATTAAAAACGAAAAAAACGAAAA]
[+] EMBL CNS09P7K [ACCAAAACAAAAAATCACAACAAACTGGTGGTAAATGATTCCACACGCAATATTTCTTTTATTTTTTGTTGAGTTCAACACAACACAAAACATCACATAATGGTAATCCGGAAGTACCTTTGTTCGGCCTTCTCCTCACTCATCTCTGCCCGTTGTCTTTCTAGCGTAAAAGCCTCGTGCCACAGCGATGCACACCGTCGAATGCCGTTCACTCGCCGTTCAAAAGCCCGCTTTCGGCACAAAAGCGCCAGCGCGGAATGCCGCAAGCGATGGCACGGGTGTGGCGCGATGGGCAGAAGAAACCGTGCTTTATCTACCGGCTGCTAGCGACCGGCACGATCGAGGAGAAGATTTTCCAGCGCCAAACGCACAAAAAAGCCCTCTCGACGACGGTGGTGGACAATGCGGAGGACGGCGAGCGGCACTTCACGCAGGACGATCTGAAGGACCTGTTCAAGTTGGACGAGCAGACGCGCTCCGACACGCACGACATCTTCCGCTGCAAGCTG GCACCAATGGGGTGCAGATGAAGCTGCCGCCGGACGACAGTTACTGCATGTCCGATCTGGCCCACTGGTATCACTGCGCGAACAATAAGGGCATCCCGGACGATATACTGTCCAAATCGTGGGACATTACGCGGTGCGTGTCGTTCGTGTTTCACCACCGGTCGAACTCGGCCGTCGTGGAGCAGCAGCTGGCGGA CAGCGGCGCCA CAGGGCTCTGGCCAAGGAGCGGGAGGAAAAGGAGGAGGAAGAAGAGGAGGAGGAGGATAAGGAAAACAAAGGGTACAACACGGAAGGGGAAGAGGAGGAGGAGGAGCCGGAAGATGATGAAAAGGATAAAGATTTTGTGTTGTAGTGTGTAACACGGCGCCGC ]
[-] EMBL CNS09P7L [ ACTTCACGCAGGACGATCTGAAGGACCTGTTCAAGTTGGACGAGAAAACGCGCTCCCAAACGCACCACATCTTCCGCTGCAAGCGGTGCACCAATGGGGTGCAGATGAAGCTGCCCCCGGACCACAGTAACTGCATGTCCGGTCTGGCCCACTGGTATCACTGCGCGAACAATAAGGGCATCCCGGACGATATACTGTCCAAATCGTGGGACATTACGCGGTGCGTGTCGTTCGTGTTTCACCACCGGTCGAACTCGGCCGTCGTGGAGCAGCCGCTGGCGGAGCAGCGGCGCCAGCA GGCTCTGGCCAAGGAGCGGGAGGAAAAGGAGGAGGAAGAAGAGGAGGAGGAGGATAAGGAAAACAAAGGGTACAACACGGAAGGGGAAGAGGAGGAGGAGGAGCCGGAAGATGATGAAAAGGATAAAGATTTTGTGTTGTAGTGTGTAACACGGCGCCGCACATTCGCCGCTAATTGGGCACGATGTAAATTTTTATTAAAAACGAAAAAAACGAAAA]
consensusID : consensus_4075#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 608 fasta sequence
[GCAAGAATTCCCGCACGAGGATCTTCATGCTCAGCTCGAAGGCGGGCGGCTGCGGGTTGAATCTGATCGGTGCCAACCGGCTGGTCATAGTTCGATCCCGACTGGAACCCGGCGAACGATGAGCAAGCGATGGCACGGGTGTGGCGCGATGGGCAGAAGAAACCGTGCTTTATCTACCGGCTGCTAGCGACCGGCACGATCGAGGAGAAGATTTTCCAGCGCCAAACGCACAAAAAAGCCCTCTCGACGACGGTGGTGGACAATGCGGAGGACGGCGAGCGGCACTTCACGCAGGACGATCTGAAGGACCTGTTCAAGTTGGACGAGCAGACGCGCTCCGACACGCACGACATCTTCCGCTGCAAGCGGTGCACCAATGGGGTGCAGATGAAGCTGCCGCCGGACGACAGTGACTGCATGTCCGATCTGGCCCACTGGTATCACTGCGCGAACAAGTAAGGGCATCCCGGACGATATACTGTCCAAATCGTGGGACATTACGCGGTGCGTGTCGTTACGTGTTTCACCACCGGTCGAACTCGGCCGTCGTGGAGCAGCAGCTGGCGGAGCAGCGGCGCCAGCAGGCTCTGGCCAAGGAGCGGGAGGAA]
[+] EMBL BX468269 [GCAAGAATTCCCGCACGAGGATCTTCATGCTCAGCTCGAAGGCGGGCGGCTGCGGGTTGAATCTGATCGGTGCCAACCGGCTGGTCATAGTTCGATCCCGACTGGAACCCGGCGAACGATGAGCAAGCGATGGCACGGGTGTGGCGCGATGGGCAGAAGAAACCGTGCTTTATCTACCGGCTGCTAGCGACCGGCACGATCGAGGAGAAGATTTTCCAGCGCCAAACGCACAAAAAAGCCCTCTCGACGACGGTGGTGGACAATGCGGAGGACGGCGAGCGGCACTTCACGCAGGACGATCTGAAGGACCTGTTCAAGTTGGACGAGCAGACGCGCTCCGACACGCACGACATCTTCCGCTGCAAGCGGTGCACCAATGGGGTGCAGATGAAGCTGCCGCCGGACGACAGTGACTGCATGTCCGATCTGGCCCACTGGTATCACTGCGCGAACAAGTAAGGGCATCCCGGACGATATACTGTCCAAATCGTGGGACATTACGCGGTGCGTGTCGTTACGTGTTTCACCACCGGTCGAACTCGGCCGTCGTGGAGCAGCAGCTGGCGGAGCAGCGGCGCCAGCAGGCTCTGGCCAAGGAGCGGGAGGAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4075#0 ACCAAAACAAAAAATCACAACAAACTGGTGGTAAATGATTCCACACGCAATATTTCTTTT 60
consensus_4075#1 ------------------------------------------------------------
consensus_4075#0 ATTTTTTGTTGAGTTCAACACAACACAAAACATCACATAATGGTAATCCGGAAGTACCTT 120
consensus_4075#1 ------------------------------------------------------------
consensus_4075#0 TGTTCGGCCTTCTCCTCACTCATCTCTGCCCGTTGTCTTTCTAGCGTAAA--AGCCTCGT 178
consensus_4075#1 ---------------GCAAGAATTCCCGCACGAGGATCTTCATGCTCAGCTCGAAGGCGG 45
** ** * ** ** * *** ** * **
consensus_4075#0 GCCACAGCGATGCACACCGTCGAATGCCGTTCACTCGCCGTTCAAAAGCCCGCTTTCGGC 238
consensus_4075#1 GCGGCTGCGGGTTGAATC--TGATCGGTGCCAACCGGCTGGTCATA-GTTCGATCCCGAC 102
** * *** * * ** * * ** ** * *** * * ** * ** *
consensus_4075#0 ACAAAAGCGCCAGCGCGGAATGCCGCAAGCGATGGCACGGGTGTGGCGCGATGGGCAGAA 298
consensus_4075#1 TGGAAC---CCGGCGAACGATGA-GCAAGCGATGGCACGGGTGTGGCGCGATGGGCAGAA 158
** ** *** *** ************************************
consensus_4075#0 GAAACCGTGCTTTATCTACCGGCTGCTAGCGACCGGCACGATCGAGGAGAAGATTTTCCA 358
consensus_4075#1 GAAACCGTGCTTTATCTACCGGCTGCTAGCGACCGGCACGATCGAGGAGAAGATTTTCCA 218
************************************************************
consensus_4075#0 GCGCCAAACGCACAAAAAAGCCCTCTCGACGACGGTGGTGGACAATGCGGAGGACGGCGA 418
consensus_4075#1 GCGCCAAACGCACAAAAAAGCCCTCTCGACGACGGTGGTGGACAATGCGGAGGACGGCGA 278
************************************************************
consensus_4075#0 GCGGCACTTCACGCAGGACGATCTGAAGGACCTGTTCAAGTTGGACGAGCAGACGCGCTC 478
consensus_4075#1 GCGGCACTTCACGCAGGACGATCTGAAGGACCTGTTCAAGTTGGACGAGCAGACGCGCTC 338
************************************************************
consensus_4075#0 CGACACGCACGACATCTTCCGCTGCAAGCTG-GCACCAATGGGGTGCAGATGAAGCTGCC 537
consensus_4075#1 CGACACGCACGACATCTTCCGCTGCAAGCGGTGCACCAATGGGGTGCAGATGAAGCTGCC 398
***************************** * ****************************
consensus_4075#0 GCCGGACGACAGTTACTGCATGTCCGATCTGGCCCACTGGTATCACTGCGCGAACAA-TA 596
consensus_4075#1 GCCGGACGACAGTGACTGCATGTCCGATCTGGCCCACTGGTATCACTGCGCGAACAAGTA 458
************* ******************************************* **
consensus_4075#0 AGGGCATCCCGGACGATATACTGTCCAAATCGTGGGACATTACGCGGTGCGTGTCGTT-C 655
consensus_4075#1 AGGGCATCCCGGACGATATACTGTCCAAATCGTGGGACATTACGCGGTGCGTGTCGTTAC 518
********************************************************** *
consensus_4075#0 GTGTTTCACCACCGGTCGAACTCGGCCGTCGTGGAGCAGCAGCTGGCGGA-CAGCGGCGC 714
consensus_4075#1 GTGTTTCACCACCGGTCGAACTCGGCCGTCGTGGAGCAGCAGCTGGCGGAGCAGCGGCGC 578
************************************************** *********
consensus_4075#0 CACAGGGCTCTGGCCAAGGAGCGGGAGGAAAAGGAGGAGGAAGAAGAGGAGGAGGAGGAT 774
consensus_4075#1 CAGCAGGCTCTGGCCAAGGAGCGGGAGGAA------------------------------ 608
** *************************
consensus_4075#0 AAGGAAAACAAAGGGTACAACACGGAAGGGGAAGAGGAGGAGGAGGAGCCGGAAGATGAT 834
consensus_4075#1 ------------------------------------------------------------
consensus_4075#0 GAAAAGGATAAAGATTTTGTGTTGTAGTGTGTAACACGGCGCCGCACATTCGCCGCTAAT 894
consensus_4075#1 ------------------------------------------------------------
consensus_4075#0 TGGGCACGATGTAAATTTTTATTAAAAACGAAAAAAACGAAAA 937
consensus_4075#1 -------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||