These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4391#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 783 fasta sequence [AAGCTGCGGCACTGGCTACACGCTCAACGCGGAAACGGGCCACTGTGATGATGACGATGAGTGCGCGCTGGGACGTCACAACTGTCGGCCGCCGTTCGAATGCTTCAACACCAAGGGCTCGTTCCGTTGCCGTCAGCTGTCGAGATATCACACGCTGACCAGTACGTCCACATCGACCACGACCAGCACTACCACCGTGCGGCCCTCGTACAATCCTGCTGGGTACGGGCACTATCCGGCTTCGCGATACTCTTCCTACCAGCCGCAGCTGCCACCGTGCGGCATAGGATTCGAGCGGAACAGTGCGGGAGCGTGTGTCGATATTGACGAATGTGCCCGTGGAGCTAGCTGTCATCGCCATCAGCAGTGCATTAATACGAATGGATCGTACCGCTGCCGGGACCTGTTGACCTGTCCCGTGGGATATCGCGTGAACGATGACATTACGGAGTGTCTAGACATCGACGAGTGTGCTACCGGCGAGGCACTGTGCGGGCCGGATCAGACGTGCAAAAACAAGAAGGGAGGCTATGTGTGCGTCTGTCCGCCGGGGCATATGATTGGGCGGAACAAGCGGTGCGAGGATATAGATGAGTGTGCGATGCACGGCTCGAAGGTGTGCCAGCAGAACTCGAACTGCGTCAATACGATCGGCTCGTACCGGTGCGACTGCAAGGANGGCTTTAAGAATGGGCCGAACGAGATGATCTGCACGGATGTGGACGAGTGCAAGGAGATCCCGGGGCTGTGCCATCAGCGCTGCCTGAACTATTGGGGATCGTA] [+] EMBL BX625433 [AAGCTGCGGCACTGGCTACACGCTCAACGCGGAAACGGGCCACTGTGATGATGACGATGAGTGCGCGCTGGGACGTCACAACTGTCGGCCGCCGTTCGAATGCTTCAACACCAAGGGCTCGTTCCGTTGCCGTCAGCTGTCGAGATATCACACGCTGACCAGTACGTCCACATCGACCACGACCAGCACTACCACCGTGCGGCCCTCGTACAATCCTGCTGGGTACGGGCACTATCCGGCTTCGCGATACTCTTCCTACCAGCCGCAGCTGCCACCGTGCGGCATAGGATTCGAGCGGAACAGTGCGGGAGCGTGTGTCGATATTGACGAATGTGCCCGTGGAGCTAGCTGTCATCGCCATCAGCAGTGCATTAATACGAATGGATCGTACCGCTGCCGGGACCTGTTGACCTGTCCCGTGGGATATCGCGTGAACGATGACATTACGGAGTGTCTAGACATCGACGAGTGTGCTACCGGCGAGGCACTGTGCGGGCCGGATCAGACGTGCAAAAACAAGAAGGGAGGCTATGTGTGCGTCTGTCCGCCGGGGCATATGATTGGGCGGAACAAGCGGTGCGAGGATATAGATGAGTGTGCGATGCACGGCTCGAAGGTGTGCCAGCAGAACTCGAACTGCGTCAATACGATCGGCTCGTACCGGTGCGACTGCAAGGANGGCTTTAAGAATGGGCCGAACGAGATGATCTGCACGGATGTGGACGAGTGCAAGGAGATCCCGGGGCTGTGCCATCAGCGCTGCCTGAACTATTGGGGATCGTA] consensusID : consensus_4391#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 644 fasta sequence [CCGCGGCTGGGCTGCACGGGCTGTGCCTGTCGACCATCGAAATCTGCTGCTCGAAGCAGCACAAAATCTACCAATGCACAGCTGGCCAGATAGCGGCCCGCCAGGGTCTCAGCTGCTCGCTCAAGGGTGACCATTCCGGGTCGGAGTTTTACACGGATTGCTGCGAAGCGTGCAAAATTGGGCTGGTGGTTGGCTCGAGCGCTAACAAGTGCTCGGTGGAACCGTTCGCCTTCGGAAGCCCCTGGGACGAGATCTATGACGCTTGCTGCAACGACATCAAGAAAGAAGGTGAAATCATACTCCTCAGTGGCAACGATGAGCAGAGCTTATGTGAGCAGTTTCCGTCGATCTGCTCGCAGGTGTGCGAGAACGTCGAGGGCGGTTCGTATGTGTGCAAGTGCCATCCCGGGTACGAGCTGCTGGACGACAGGAAAACCTGTGCCCTGGTTTCGGACGAGGATAATGAAACGGTTGAGCGTAAAGGCTGTGATGCCGGCTTCAAGCACAATAAGCGCACGGACAAATGTGAGGATGTGAACGAGTGCGAAACGGGCGAGGCCACCTGTAACCCGGACAGTCAGGTTTGTCGAAACACACGCGGCAGCTTCCTGTGCGTTGATGTCGTCCTTCCGGACATTGCTTGC] [+] EMBL BM589113 [CCGCGGCTGGGCTGCACGGGCTGTGCCTGTCGACCATCGAAATCTGCTGCTCGAAGCAGCACAAAATCTACCAATGCACAGCTGGCCAGATAGCGGCCCGCCAGGGTCTCAGCTGCTCGCTCAAGGGTGACCATTCCGGGTCGGAGTTTTACACGGATTGCTGCGAAGCGTGCAAAATTGGGCTGGTGGTTGGCTCGAGCGCTAACAAGTGCTCGGTGGAACCGTTCGCCTTCGGAAGCCCCTGGGACGAGATCTATGACGCTTGCTGCAACGACATCAAGAAAGAAGGTGAAATCATACTCCTCAGTGGCAACGATGAGCAGAGCTTATGTGAGCAGTTTCCGTCGATCTGCTCGCAGGTGTGCGAGAACGTCGAGGGCGGTTCGTATGTGTGCAAGTGCCATCCCGGGTACGAGCTGCTGGACGACAGGAAAACCTGTGCCCTGGTTTCGGACGAGGATAATGAAACGGTTGAGCGTAAAGGCTGTGATGCCGGCTTCAAGCACAATAAGCGCACGGACAAATGTGAGGATGTGAACGAGTGCGAAACGGGCGAGGCCACCTGTAACCCGGACAGTCAGGTTTGTCGAAACACACGCGGCAGCTTCCTGTGCGTTGATGTCGTCCTTCCGGACATTGCTTGC] consensusID : consensus_4391#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 567 fasta sequence [CCGCCCACGCGTCCGGCCAGGTTTGTCGAAACACACTCGGCAGCTTCCTGTGCGTTGATGTCGTCCTTCCGGACATTGCTTGCGACCCGGGCTACACACCGAAGAATGGCAAATGTGAAGACGTCAACGAGTGCGAGGAGGACGGTGCCTGCGACGAAGGATACCGTTGCGTCAACATCGAGGGCTCGTACGAGTGTATCGCGGAGGTGAAGAATTATCCAACCCCGGCAAGAAAGAAGGTTGAAACGTGTACGCCCGGTTTCCGGCGTCATAATGATCAGTGCGTGGATATTGATGAGTGTGCGATGCACGGCTCGAAGGTGTGCCAGTAGAACTCGAACTGCGTCAATACGATCGGCTCGTACCGGTGCGACTGCAAGGAGGGCTTCAAGAATGGGCCGAACGAGATGATCTGCACGGATGTGGACAAGTGCAAGGAGATCCCGGGGCTGTGCCATCAGCGCTGCCTGAACTATTGGGGATCGTACCGGTGCGGGTGCCATCCGGGCTACAGGATAAGCTACAACAATCGCACCTGCGACTATGTGGACGACTGTGAGGAGTACA] [+] EMBL BM599848 [CCGCCCACGCGTCCGGCCAGGTTTGTCGAAACACACTCGGCAGCTTCCTGTGCGTTGATGTCGTCCTTCCGGACATTGCTTGCGACCCGGGCTACACACCGAAGAATGGCAAATGTGAAGACGTCAACGAGTGCGAGGAGGACGGTGCCTGCGACGAAGGATACCGTTGCGTCAACATCGAGGGCTCGTACGAGTGTATCGCGGAGGTGAAGAATTATCCAACCCCGGCAAGAAAGAAGGTTGAAACGTGTACGCCCGGTTTCCGGCGTCATAATGATCAGTGCGTGGATATTGATGAGTGTGCGATGCACGGCTCGAAGGTGTGCCAGTAGAACTCGAACTGCGTCAATACGATCGGCTCGTACCGGTGCGACTGCAAGGAGGGCTTCAAGAATGGGCCGAACGAGATGATCTGCACGGATGTGGACAAGTGCAAGGAGATCCCGGGGCTGTGCCATCAGCGCTGCCTGAACTATTGGGGATCGTACCGGTGCGGGTGCCATCCGGGCTACAGGATAAGCTACAACAATCGCACCTGCGACTATGTGGACGACTGTGAGGAGTACA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_4391#0 AAGCTGCGGCACTGGCTACACGCTCAACGCGGAAACGGGCCACTGTGATGATGACGATGA 60 consensus_4391#2 ------------------------------------------------------------ consensus_4391#1 ------------------------------------------------------------ consensus_4391#0 GTGCGCGCTGGGACGTCACAACTGTCGGCCGCCGTTCGAATGCTTCAACACCAAGGGCTC 120 consensus_4391#2 ------------------------------------------------------------ consensus_4391#1 ------------------------------------------------------------ consensus_4391#0 GTTCCGTTGCCGTCAGCTGTCGAGATATCACACGCTGACCAGTACGTCCACATCGACCAC 180 consensus_4391#2 ------------------------------------------------------------ consensus_4391#1 ----------------------------------------------------CCGCGGCT 8 consensus_4391#0 GACCAGCACTACCACCGTGCGGCCCTCGTACAATCCTGCTGGGTACGGGCACTATCCGGC 240 consensus_4391#2 ------------------------------------------------------------ consensus_4391#1 GGGCTGCACGGGCTGTGCCTGTCGACCATCGAAATCTGCTGCTCG-AAGCAGCACAAAAT 67 consensus_4391#0 TTCGCGATACTCTTCCTACCAGCCGCAGCTGCCACCGTGCGGCATAGGATTCGAGCGGAA 300 consensus_4391#2 --------------------------------------CCGCCCACGCGTCCGGCCAGGT 22 consensus_4391#1 CTACCAATGCACAGCTGGCCAGATAGCGGC-CCGCCAGGGTCTCAGCTGCTCGCTCAAGG 126 ** * consensus_4391#0 CAGTGCGGGAGCGTGTGTCGATATTGACGAATGTGCCCGTGGAGCTAGCTGTCATCGCCA 360 consensus_4391#2 TTGTCGAAACACACTCGGCAGC-TTCCTGTGCGTTGATGTCGTCCTTCCGGACATTGCTT 81 consensus_4391#1 GTGACCATTCCGGGTCGG-AGT-TTTACACGGATTGCTGCGAAGCGTGCAAAATTGGGCT 184 * * ** * * * * * * consensus_4391#0 TCAGCAGTGCATTAATACGAATGGATCGTACCGCTGCCGGGACCTGTTGACCTGTCCCGT 420 consensus_4391#2 GCGACCCGGGCTACACACCGAAGAATGGCA--AATGTGAAGAC--GTCAACGAGTGC-GA 136 consensus_4391#1 GGTGGTTGGCTCGAGCGCTAACAAGTGCTC--GGTGGAACCGTTCGCCTTCGGAAGC-CC 241 * * * * ** * * * consensus_4391#0 GGGATATCGCGTGAACGATGACATTACGGAGTGTCTAGACATCGACGAGTGTGCTACCGG 480 consensus_4391#2 GGAGGACGGTGCCTGCGACGAAGGATACCGTTGCGTCAACATCGA-GGGCTCG-TACGAG 194 consensus_4391#1 CTGGGACGAGATCTATGACG------CTTGCTGCAACGACATCAAGAAAGAAGGTGAAAT 295 * ** * ** ***** * * * consensus_4391#0 CGAGGCACTGTGCGGGCCGGATCAGACGTGCAAAAACAAGAAGGGAGGCT---ATGTGTG 537 consensus_4391#2 TGTATCGCGGAG-GTGAAGAATTATCCA-ACCCCGGCAAGAAAGAAGGTTGAAACGTGTA 252 consensus_4391#1 CATACTCCTCAGTGGCAACGATGAGCAGAGCTTATGTGAGCAGTTTCCGTCG-ATCTGCT 354 * * * ** * * ** * * * ** consensus_4391#0 CGTCTGTCCGCCGGGGCATATGATTGGGCGGAACA-AGCGGTGCGAGGATATAGATGAGT 596 consensus_4391#2 CGCCCGGTTTCCGGCGT-----------CATAATG-ATCAGTGCGTGGATATTGATGAGT 300 consensus_4391#1 CGCAGGTGTGCGAGAACGTCGA---GGGCGGTTCGTATGTGTGCAAGTGCCATCCCGGGT 411 ** * * * * * **** * * ** consensus_4391#0 GTGCGATGC---ACGGCTCGAAGGTGTGCCAGCAGAACTCGAACTGCGTCAATACGATCG 653 consensus_4391#2 GTGCGATGC---ACGGCTCGAAGGTGTGCCAGTAGAACTCGAACTGCGTCAATACGATCG 357 consensus_4391#1 ACGAGCTGCTGGACGACAGGAAAACCTGTGCCCTGGTTTCGGACGAGGATAATG-AAACG 470 * * *** *** * *** ** * *** ** * *** * ** consensus_4391#0 GCTCGTACCGGTGCGACTGCAAGGANGGCTTTAAGAATGGGCCGAACGAGATGATCTGCA 713 consensus_4391#2 GCTCGTACCGGTGCGACTGCAAGGAGGGCTTCAAGAATGGGCCGAACGAGATGATCTGCA 417 consensus_4391#1 GTTG--AGCGTAAAGGCTGTGATGCCGGCTTCAAGCACAATAAGCGCACGGACAAATGTG 528 * * * ** * *** * * ***** *** * * * * * ** consensus_4391#0 CGGATGTGGACGAGTGCAAGGAGATCCCGGGGCTGTGCCATCAGCGCTGCCTGAACTATT 773 consensus_4391#2 CGGATGTGGACAAGTGCAAGGAGATCCCGGGGCTGTGCCATCAGCGCTGCCTGAACTATT 477 consensus_4391#1 AGGATGTGAACGAGTGCGAAACGGGCGAGGCCACCTGTAACCCGGACAGTCAGGTTTGTC 588 ******* ** ***** * * * ** ** * * * * * * * * * consensus_4391#0 GGGGATCGTA-------------------------------------------------- 783 consensus_4391#2 GGGGATCGTACCGGTGCGGGTGCCATCCGGGCTACAGGATAAGCTACAACAATCGCACCT 537 consensus_4391#1 GAAACACACGCGGCAGCTTCCTGTGCGTTGATGTCGTCCTTCCGGACATTGCTTGC---- 644 * * consensus_4391#0 ------------------------------ consensus_4391#2 GCGACTATGTGGACGACTGTGAGGAGTACA 567 consensus_4391#1 ------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||