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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4525#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 971 fasta sequence
[CCGATCTTTACAGATTGTGCTAAAAGGTGTGTTTTTCTTCTTCTCGTGTGCTCCCCACGAAAACAGATCCAAGACAAACTCGAGGAAGCACCAGCGCCACTGCATCCAGTGCGAGTGGACAACGCGCCCCTACTGAAGGAGGTGATCGATCGCTGTAGCCTGTCGAGGAATCCGCACGCCCGTGAGCTCGCTCGCATCTTCCGCTATCCACACTTTCGCGCCCTGCTCGAAGCGCACGACGAGATCGGTGAGACGCAGCTCGAAAAGCTAAAGCATCCCCCCACGTCCGCCACGTCCAGCCCGGGTGGCAACAGTCAGTACCACCAGGCCAGCCCATCCAGCGAGACAGTCGACGGGTCCGGTGTGGAGCTGCTCACCATCAACGATATGCCCGGGGAAACGATCAAGATGGTCGGGATCCGGAGAAATCCGGACGAACCGCTCGGCCTGACGGTGGAGGTCGACGAGCACAATCAGCTGGTGGTGGCCCGAATCATCGCGGGCGGCATGATCGATCGGCAGGGGCTGCTCCATCCGGGCGACGTCATACTGGAGGTGAACGGGGTGCCCGTGACCACGCCCGAGGAGCTGCAGGGCGAGATCTCGGTCGCGAAGGAGTCGGTAACGTTGAAGATTGGGCCGAGCGTCGAGGAGGAGATGAAATCTGCCCGCATCACCATGGCCGGTGGACAGGTAAAGAATGGAAGAAATTTAGACTCGGGCAAGAAGCTGACGTGTTATATGCGGGCCTTGTTCGATTACGATCCAAATGAGGACAATCTGTTACCGTGCAAGGAGATTGGGCTGTCGTTTTTGCGCGGTGACATACTGCAGATTATCAACGTGAAGGATCCAAACTGGTGGCAGGCGAAGCATGCGGGACGAGGATGGACCAACGGGGCTCATACCGTCCCAGGAGCTGGAGGAACGCCGACAGGCGTACGTACCTCCGGAGGCAGATTTCGTGCATA]
[+] EMBL BM653952 [CCGATCTTTACAGATTGTGCTAAAAGGTGTGTTTTTCTTCTTCTCGTGTGCTCCCCACGAAAACAGATCCAAGACAAACTCGAGGAAGCACCAGCGCCACTGCATCCAGTGCGAGTGGACAACGCGCCCCTACTGAAGGAGGTGATCGATCGCTGTAGCCTGTCGAGGAATCCGCACGCCCGTGAGCTCGCTCGCATCTTCCGCTATCCACACTTTCGCGCCCTGCTCGAAGCGCACGACGAGATCGGTGAGACGCAGCTCGAAAAGCTAAAGCATCCCCCCACGTCCGCCACGTCCAGCCCGGGTGGCAACAGTCAGTACCACCAGGCCAGCCCATCCAGCGAGACAGTCGACGGGTCCGGTGTGGAGCTGCTCACCATCAACGATATGCCCGGGGAAACGATCAAGATGGTCGGGATCCGGAGAAATCCGGACGAACCGCTCGGCCTGACGGTGGAGGTCGACGAGCACAATCAGCTGGTGGTGGCCCGAATCATCGCGGGCGGCATGATCGATCGGCAGGGGCTGCTCCATCCGGGCGACGTCATACTGGAGGTGAACGGGGTGCCCGTGACCACGCCCGAGGAGCTGCAGGGCGAGATCTCGGTCGCGAAGGAGTCGGTAACGTTGAAGATTGGGCCGAGCGTCGAGGAGGAGATGAAATCTGCCCGCATCACCATGGCCG ]
[+] EMBL BM629917 [ ccgGCATCCCCTCACGTCCGCCACGTCCAGCCCGGGTGGCAACAGTCAGTACCACCAGGCCAGCCCATCCAGCGAGACAGTCGACGGGTCCGGTGTAGAGCTGCTCACCATCAACGATATGCCCGGGGAAACGATCAAGATGGTCGGGATCCGGAGAAATCCGGACGAACCGCTCGGCCTGACGGTGGAGGTCGACGAGCACAATCAGCTGGTGGTGGCCCGAATCATCGCGGGCGGCATGATCGATCGGCAGGGGCTGCTCCATCCGGGCGACGTCATACTGGAGGTGAACGGGGTGCCTGTGACCACGCCCGAGGAGCTGCAGGGCGAGATCTCGGTCGCGAAGGAGTCGGTAACGTTGAAGATTGGGCCGAGCGTCGAGGAGGAGATGAAATCTGCCCGCATCACCATGGCCGGTGGACAGGTAAAGAATGGAAGAAATTTAGACTCGGGCAAGAAGCTGACGTGTTATATGCGGGCCTTGTTCGATTACGATCCAAATGAGGACAATCTGTTACCGTGCAAGGAGATTGGGCTGTCGTTTTTGCGCGGTGACATACTGCAGATTATCAACGTGAAGGATCCAAACTGGTGGCAGGCGAAGCATGCGGGACGAGGATGGACCAACGGGGCTCATACCGTCCCAGGAGCTGGAGGAACGCCGACAGGCGTACGTACCTCCGGAGGCAGATTTCGTGCATA]
consensusID : consensus_4525#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 674 fasta sequence
[CCGGCTTGGAAGAGGTTTAGCAGCTTTGGAGTTATCCGGTTTCACTGTGTTCAAGACCATCGGGGGTTGATCCAAGACAAACTCGAGGAAGCACCAGCGCCACTGCATCCAGTGCGAGTGGACAACGCGCCCCTACTGAAGGAGGTGATCGATCGCTGTAGCCTGTCGAGGAATCCGCACGCCCGTGAGCTCGCTCGCATCTTCCGCTATCCACACTTTCGCGCCCTGCTCGAAGCGCACGACGAGATCGGTGAGACGCAGCTCGAAAAGCTAAAGCATCCCCCCACGTCCGCCACGTCCAGCCCGGGTGGCAACAGTCAGTACCACCAGGCCAGCCCATCCAGCGAGACAGTCGACGGGTCCGGTGTGGAGCTGCTCACCATCAACGATATGCCCGGGGAAACGATCAAGATGGTCGGGATCCGGAGAAATCCGGACGAACCGCTCGGCCTGACGGTGGAGGTCGACGAGCACAATCAGCTGGTGGTGGCCCGAATCATCGCGGGCGGCATGATCGATCGGCAGGGGCTGCTCCATCCGGGCGACGTCATACTGGAGGTGAACGGGGTGCCCGTGACCACGCCCGAGGAGCTGCAGGGCGAGATCTCGGTCGCGAAGGAGTCGGTAACGTTGAAGATTGGGCCGAGCGTCGAGGAGGAGATGAAATCTGCCCG]
[+] EMBL BM596350 [CCGGCTTGGAAGAGGTTTAGCAGCTTTGGAGTTATCCGGTTTCACTGTGTTCAAGACCATCGGGGGTTGATCCAAGACAAACTCGAGGAAGCACCAGCGCCACTGCATCCAGTGCGAGTGGACAACGCGCCCCTACTGAAGGAGGTGATCGATCGCTGTAGCCTGTCGAGGAATCCGCACGCCCGTGAGCTCGCTCGCATCTTCCGCTATCCACACTTTCGCGCCCTGCTCGAAGCGCACGACGAGATCGGTGAGACGCAGCTCGAAAAGCTAAAGCATCCCCCCACGTCCGCCACGTCCAGCCCGGGTGGCAACAGTCAGTACCACCAGGCCAGCCCATCCAGCGAGACAGTCGACGGGTCCGGTGTGGAGCTGCTCACCATCAACGATATGCCCGGGGAAACGATCAAGATGGTCGGGATCCGGAGAAATCCGGACGAACCGCTCGGCCTGACGGTGGAGGTCGACGAGCACAATCAGCTGGTGGTGGCCCGAATCATCGCGGGCGGCATGATCGATCGGCAGGGGCTGCTCCATCCGGGCGACGTCATACTGGAGGTGAACGGGGTGCCCGTGACCACGCCCGAGGAGCTGCAGGGCGAGATCTCGGTCGCGAAGGAGTCGGTAACGTTGAAGATTGGGCCGAGCGTCGAGGAGGAGATGAAATCTGCCCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4525#0 CCGATCTTTACAGATTGTGCTAAAAGGTGTGTTTTTCTTCTTCTCGTGTGCTC----CCC 56
consensus_4525#1 CCGGCTTGGAAGAGGTTTAGCAGCTTTGGAGTTATCCGGTTTCAC-TGTGTTCAAGACCA 59
*** * * * * * * *** * * *** * **** ** **
consensus_4525#0 ACGAAAACAGATCCAAGACAAACTCGAGGAAGCACCAGCGCCACTGCATCCAGTGCGAGT 116
consensus_4525#1 TCGGGGGTTGATCCAAGACAAACTCGAGGAAGCACCAGCGCCACTGCATCCAGTGCGAGT 119
** ***************************************************
consensus_4525#0 GGACAACGCGCCCCTACTGAAGGAGGTGATCGATCGCTGTAGCCTGTCGAGGAATCCGCA 176
consensus_4525#1 GGACAACGCGCCCCTACTGAAGGAGGTGATCGATCGCTGTAGCCTGTCGAGGAATCCGCA 179
************************************************************
consensus_4525#0 CGCCCGTGAGCTCGCTCGCATCTTCCGCTATCCACACTTTCGCGCCCTGCTCGAAGCGCA 236
consensus_4525#1 CGCCCGTGAGCTCGCTCGCATCTTCCGCTATCCACACTTTCGCGCCCTGCTCGAAGCGCA 239
************************************************************
consensus_4525#0 CGACGAGATCGGTGAGACGCAGCTCGAAAAGCTAAAGCATCCCCCCACGTCCGCCACGTC 296
consensus_4525#1 CGACGAGATCGGTGAGACGCAGCTCGAAAAGCTAAAGCATCCCCCCACGTCCGCCACGTC 299
************************************************************
consensus_4525#0 CAGCCCGGGTGGCAACAGTCAGTACCACCAGGCCAGCCCATCCAGCGAGACAGTCGACGG 356
consensus_4525#1 CAGCCCGGGTGGCAACAGTCAGTACCACCAGGCCAGCCCATCCAGCGAGACAGTCGACGG 359
************************************************************
consensus_4525#0 GTCCGGTGTGGAGCTGCTCACCATCAACGATATGCCCGGGGAAACGATCAAGATGGTCGG 416
consensus_4525#1 GTCCGGTGTGGAGCTGCTCACCATCAACGATATGCCCGGGGAAACGATCAAGATGGTCGG 419
************************************************************
consensus_4525#0 GATCCGGAGAAATCCGGACGAACCGCTCGGCCTGACGGTGGAGGTCGACGAGCACAATCA 476
consensus_4525#1 GATCCGGAGAAATCCGGACGAACCGCTCGGCCTGACGGTGGAGGTCGACGAGCACAATCA 479
************************************************************
consensus_4525#0 GCTGGTGGTGGCCCGAATCATCGCGGGCGGCATGATCGATCGGCAGGGGCTGCTCCATCC 536
consensus_4525#1 GCTGGTGGTGGCCCGAATCATCGCGGGCGGCATGATCGATCGGCAGGGGCTGCTCCATCC 539
************************************************************
consensus_4525#0 GGGCGACGTCATACTGGAGGTGAACGGGGTGCCCGTGACCACGCCCGAGGAGCTGCAGGG 596
consensus_4525#1 GGGCGACGTCATACTGGAGGTGAACGGGGTGCCCGTGACCACGCCCGAGGAGCTGCAGGG 599
************************************************************
consensus_4525#0 CGAGATCTCGGTCGCGAAGGAGTCGGTAACGTTGAAGATTGGGCCGAGCGTCGAGGAGGA 656
consensus_4525#1 CGAGATCTCGGTCGCGAAGGAGTCGGTAACGTTGAAGATTGGGCCGAGCGTCGAGGAGGA 659
************************************************************
consensus_4525#0 GATGAAATCTGCCCGCATCACCATGGCCGGTGGACAGGTAAAGAATGGAAGAAATTTAGA 716
consensus_4525#1 GATGAAATCTGCCCG--------------------------------------------- 674
***************
consensus_4525#0 CTCGGGCAAGAAGCTGACGTGTTATATGCGGGCCTTGTTCGATTACGATCCAAATGAGGA 776
consensus_4525#1 ------------------------------------------------------------
consensus_4525#0 CAATCTGTTACCGTGCAAGGAGATTGGGCTGTCGTTTTTGCGCGGTGACATACTGCAGAT 836
consensus_4525#1 ------------------------------------------------------------
consensus_4525#0 TATCAACGTGAAGGATCCAAACTGGTGGCAGGCGAAGCATGCGGGACGAGGATGGACCAA 896
consensus_4525#1 ------------------------------------------------------------
consensus_4525#0 CGGGGCTCATACCGTCCCAGGAGCTGGAGGAACGCCGACAGGCGTACGTACCTCCGGAGG 956
consensus_4525#1 ------------------------------------------------------------
consensus_4525#0 CAGATTTCGTGCATA 971
consensus_4525#1 ---------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||