cluster # 4632

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Anopheles gambiae
cluster # 4632 cluster # 4632 Sequences # 3 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4632#0 length = 769 sequences # 2

consensus_4632#1 length = 692 sequences # 1

consensusID : consensus_4632#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 769
fasta sequence

                              [TGAACACGGAAAGCTCTGTGTGTGTGAGTGTGGGGGAGATTTCTCTTCAAATGTTCAATCACACCTTCACCGCAAACGAAGCGTTGTGTAATTACAATAGTGTTTCCGCACGGCCATCTCATCGTTGTGGCCCTATTAGACTAGCGTCCCATCGTTTTAACATCTTTCTCATGCCAAAGAATTACGGAACGGAGCGTTTGAATGTGGACCGTAGAGCGGTGGAGATTGAAATTGCTAAACCATAAAAAAGTATCACACGCTGCAGGGAAGTTTTTTGGAAACGGAAGTGCTTATTGTAGCGGCTGCTCGATTGATGTTCTGACTGTGTGCCAATTGTCAACGAAACAAACAGAATCACATATACTTAAGATGGGATAGGAGGAGTGCGTGTAGGAAATTTATACATATACTCTTAGTGGCAAACATAGGCATGCATGTATATGCAACACACTTTAGGCGAAATTGCACAACAAATTACAATGCCAAACTCAAGCAGCTTCGCGCGGGTGCGGTTGTGGAGAGCACCATTACAGTAGAAGCGCTGCAGTGCACTTATAGTAGTAGCTAGTAGTAGTGGTGAGCAGTATTAGCCCGCTGGTGTAGTGCTGGAGTAGTGCTGGGAAATCAATCAAACGCTGGCTTATTTCATTGAGCCCGGGAAATTAGCCTCGATAAACTAGCAGGATCAGCAGCAGCAGCTCGCTTGTAACACCATGTTAAATGGGGCATGTGTGCGATGTTGGGTACTACTAGACGCAGACTAAGATAT]

[+] EMBL BX624665             [TGAACACGGAAAGCTCTGTGTGTGTGAGTGTGGGGGAGATTTCTCTTCAAATGTTCAATCACACCTTCACCGCAAACGAAGCGTTGTGTAATTACAATAGTGTTTCCGCACGGCCATCTCATCGTTGTGGCCCTATTAGACTAGCGTCCCATCGTTTTAACATCTTTCTCATGCCAAAGAATTACGGAACGGAGCGTTTGAATGTGGACCGTAGAGCGGTGGAGATTGAAATTGCTAAACCATAAAAAAGTATCACACGCTGCAGGGAAGTTTTTTGGAAACGGAAGTGCTTATTGTAGCGGCTGCTCGATTGATGTTCTGACTGTGTGCCAATTGTCAACGAAACAAACAGAATCACATATACTTAAGATGGGATAGGAGGAGTGCGTGTAGGAAATTTATACATATACTCTTAGTGGCAAACATAGGCATGCATGTATATGCAACACACTTTAGGCGAAATTGCACAACAAATTACAATGCCAAACTCAAGCAGCTTCGCGCGGGTGCGGTTGTGGAGAGCACCATTACAGTAGAAGCGCTGCAGTGCACTTATAGTAGTAGCTAGTAGTAGTGGTGAGCAGTATTAGCCCGCTGGTGTAGTGCTGGAGTAGTGCTGGGAAATCAATCAAACGCTGGCTTATTTCATTGAGCCCGGGAAATTAGCCTCGATAAACTAGCAGGATCAGCAGCAGCAGCTCGCTTGTAACACCATGTTAAATGGGGCATGTGTGCGATGTTGGGTACTACTAGACGCAGACTAAGATAT]
[+] EMBL BX608990             [                                                                                                                                                                                                                                                                                             AGTGCTTATTGTAGCGGCTGCTCGATTGATGTTCTGACTGTGTGCCAATTGTCAACGAAACAAACAGAATCACATATACTTAAGATGGGATAGGAGGAGTGCGTGTAGGAAATTTATACATATACTCTTAGTGGCAAACATAGGCATGCATGTATATGCAACACACTTTAGGCGAAATTGCACAACAAATTACAATGCCAAACTCAAGCAGCTTCGCGCGGGTGCGGTTGTGGAGAGCACCATTACAGTAGAAGCGCTGCAGTGCACTTATAGTAGTAGCTAGTAGTAGTGGTGAGCAGTATTAGCCCGCTGGTGTAGTGCTGGAGTAGTGCTGGGAAATCAATCAAACGCTGGCTTATTTCATTGAGCCCGGGAAATTAGCCT                                                                                                    ]




>consensus_4632#0
TGAACACGGAAAGCTCTGTGTGTGTGAGTGTGGGGGAGATTTCTCTTCAAATGTTCAATC
ACACCTTCACCGCAAACGAAGCGTTGTGTAATTACAATAGTGTTTCCGCACGGCCATCTC
ATCGTTGTGGCCCTATTAGACTAGCGTCCCATCGTTTTAACATCTTTCTCATGCCAAAGA
ATTACGGAACGGAGCGTTTGAATGTGGACCGTAGAGCGGTGGAGATTGAAATTGCTAAAC
CATAAAAAAGTATCACACGCTGCAGGGAAGTTTTTTGGAAACGGAAGTGCTTATTGTAGC
GGCTGCTCGATTGATGTTCTGACTGTGTGCCAATTGTCAACGAAACAAACAGAATCACAT
ATACTTAAGATGGGATAGGAGGAGTGCGTGTAGGAAATTTATACATATACTCTTAGTGGC
AAACATAGGCATGCATGTATATGCAACACACTTTAGGCGAAATTGCACAACAAATTACAA
TGCCAAACTCAAGCAGCTTCGCGCGGGTGCGGTTGTGGAGAGCACCATTACAGTAGAAGC
GCTGCAGTGCACTTATAGTAGTAGCTAGTAGTAGTGGTGAGCAGTATTAGCCCGCTGGTG
TAGTGCTGGAGTAGTGCTGGGAAATCAATCAAACGCTGGCTTATTTCATTGAGCCCGGGA
AATTAGCCTCGATAAACTAGCAGGATCAGCAGCAGCAGCTCGCTTGTAACACCATGTTAA
ATGGGGCATGTGTGCGATGTTGGGTACTACTAGACGCAGACTAAGATAT

consensusID : consensus_4632#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 692
fasta sequence

                              [GCGCTGCAGTGCACTTATAGTAGTAGCTAGTAGTAGTGAGCAGTATTAGCCCGCTGGTGTAGTGCTGGGAAATCAATCAAACGCTGGCTTATTTCATTGAGCCCGGGAAATTAGCCTCGATAAACTAGCAGGATCAGCAGCAGCAGCTCGCTTGTAACACCATGTTAAATGGGGCATGTGTGCGATGTTGGGTACTACTAGACGCGTACTAAGATATCCTACAAACAAAAAAGCAGTGCCAAAACCCGTGCCGTTTCGTGCAGAGCGTGACACATTCCAATCACTTTATTGTTGGCCAAACAGTGCGTAGAAAAAAAAGGTAGATAAAAAAGGAAATATCAAAAACGACGATCGGTAAAAGTGTTCCAAATATCAATCAAACCCTTGGGCATAACTACTCAATAGTGCCACAATCACATCACATGTAGCCTCCCCGGAGTCACCAGTCACCAGAACGCTTCGTATTACTCCCCACGGATCAGGTAGCGGTGGTTTGTAGTCCCTCTTTGTACTCAACGGCGTCAAGTGTGTCTGAGTGTGTGTGTGAGTGTGTTGGTGTGTGTGTGTGGTTGTCTGCATGTGCCCACGTCGGTAATGTTTAGTGCCATTTGATGCAAATCATTGTCAAAAAAAAGCCAAACAGTATCCTATACACACATTAACATGAATAAAGTCGAAAAGATAATCTATAT]

[+] EMBL BX613148             [GCGCTGCAGTGCACTTATAGTAGTAGCTAGTAGTAGTGAGCAGTATTAGCCCGCTGGTGTAGTGCTGGGAAATCAATCAAACGCTGGCTTATTTCATTGAGCCCGGGAAATTAGCCTCGATAAACTAGCAGGATCAGCAGCAGCAGCTCGCTTGTAACACCATGTTAAATGGGGCATGTGTGCGATGTTGGGTACTACTAGACGCGTACTAAGATATCCTACAAACAAAAAAGCAGTGCCAAAACCCGTGCCGTTTCGTGCAGAGCGTGACACATTCCAATCACTTTATTGTTGGCCAAACAGTGCGTAGAAAAAAAAGGTAGATAAAAAAGGAAATATCAAAAACGACGATCGGTAAAAGTGTTCCAAATATCAATCAAACCCTTGGGCATAACTACTCAATAGTGCCACAATCACATCACATGTAGCCTCCCCGGAGTCACCAGTCACCAGAACGCTTCGTATTACTCCCCACGGATCAGGTAGCGGTGGTTTGTAGTCCCTCTTTGTACTCAACGGCGTCAAGTGTGTCTGAGTGTGTGTGTGAGTGTGTTGGTGTGTGTGTGTGGTTGTCTGCATGTGCCCACGTCGGTAATGTTTAGTGCCATTTGATGCAAATCATTGTCAAAAAAAAGCCAAACAGTATCCTATACACACATTAACATGAATAAAGTCGAAAAGATAATCTATAT]




>consensus_4632#1
GCGCTGCAGTGCACTTATAGTAGTAGCTAGTAGTAGTGAGCAGTATTAGCCCGCTGGTGT
AGTGCTGGGAAATCAATCAAACGCTGGCTTATTTCATTGAGCCCGGGAAATTAGCCTCGA
TAAACTAGCAGGATCAGCAGCAGCAGCTCGCTTGTAACACCATGTTAAATGGGGCATGTG
TGCGATGTTGGGTACTACTAGACGCGTACTAAGATATCCTACAAACAAAAAAGCAGTGCC
AAAACCCGTGCCGTTTCGTGCAGAGCGTGACACATTCCAATCACTTTATTGTTGGCCAAA
CAGTGCGTAGAAAAAAAAGGTAGATAAAAAAGGAAATATCAAAAACGACGATCGGTAAAA
GTGTTCCAAATATCAATCAAACCCTTGGGCATAACTACTCAATAGTGCCACAATCACATC
ACATGTAGCCTCCCCGGAGTCACCAGTCACCAGAACGCTTCGTATTACTCCCCACGGATC
AGGTAGCGGTGGTTTGTAGTCCCTCTTTGTACTCAACGGCGTCAAGTGTGTCTGAGTGTG
TGTGTGAGTGTGTTGGTGTGTGTGTGTGGTTGTCTGCATGTGCCCACGTCGGTAATGTTT
AGTGCCATTTGATGCAAATCATTGTCAAAAAAAAGCCAAACAGTATCCTATACACACATT
AACATGAATAAAGTCGAAAAGATAATCTATAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4632#0      TGAACACGGAAAGCTCTGTGTGTGTGAGTGTGGGGGAGATTTCTCTTCAAATGTTCAATC 60
consensus_4632#1      ------------GCGCTGCA-GTGCACTTATAGTAGTAGCTAGTAGT--AGTGAGCAGTA 45
                                  ** ***   ***    * * *  *    *  *  *  * **  ** * 

consensus_4632#0      ACACCTTCACCGCAAACGAAGCGTTGTGTAATTAC---AATAGTGTTTCCGCACGGCCAT 117
consensus_4632#1      TTAGC----CCGCTGGTGTAGTGCTGGGAAATCAATCAAACGCTGGCTTATTTCATTGAG 101
                        * *    ****    * ** * ** * *** *    **   **  *     *    * 

consensus_4632#0      CTCATCGTTGTGGCCCTATTAGACTAGCGTCCCATCGTTTTAACATCTTTCTCATGCCAA 177
consensus_4632#1      CCCGGGAAATTAGCCTCGATAAACTAGCAGGAT-CAGCAGCAGCAGCTCGCTTGTAACAC 160
                      * *       * ***    ** ******        *    * ** **  **  *  ** 

consensus_4632#0      AGAATTACGGAACGGAGCGTTTG---AATGTGGACCGTAGAGCGGTGGAGATTGAAATTG 234
consensus_4632#1      CATGTTA---AATGGGGCATGTGTGCGATGTTGGGTACTACTAGACGCGTACTAAGATAT 217
                          ***   ** ** ** * **    **** *          *  *   * * * **  

consensus_4632#0      CTAAACCATAAAAAAGTATCACACGCTGCAGGGAAGTTTTTTGGAAACGGAAGTGCTTAT 294
consensus_4632#1      CCTACAAACAAAAAAGCAGTGCCAAAACCCGTGCCGTTTCGTGCAGAGCGTGACACATTC 277
                      *  *   * ******* *   *      * * *  ****  ** * *  *     * *  

consensus_4632#0      TGTAGCGGCTGCTCGATTGATGTTCTGACTGTGTGCCAATTGTCAACGAAACAAACAGAA 354
consensus_4632#1      -----CAATCACTTTATTGTTGGCCAAACAGTGCGTAGA---AAAAAAAGGTAGATAAAA 329
                           *     **  **** **  *  ** *** *   *     **  *   * * * **

consensus_4632#0      TCACATATACTTAAGATGGGATAGGAGGAGTGCGTGTAGGAAATTTATACATATACTCTT 414
consensus_4632#1      AAGGAAATATCAAAAACGACGATCGGTAAAAGTGTTCCAAATATCAAT---CAAACCCTT 386
                          * ***   ** * *      *   *  * **     * **  **    * ** ***

consensus_4632#0      AGTGGCAA--ACATAGGCATGCATGTATATGCAACACACTTTAGGCGAAATTGCACAACA 472
consensus_4632#1      GGGCATAACTACTCAATAGTGC-CACAATCACATCACA-TGTAGCCTCCCCGGAGTCACC 444
                       *    **  **  *    ***    *    ** **** * *** *      *    ** 

consensus_4632#0      AATTACAATGCCAAACTCAAGCAGCTTCGCGCGGGTGCGGTTGTGGAGAGCACCATTACA 532
consensus_4632#1      AGTCACCAGAACGC-TTCGTATTACTCCCCACGGATCAGGTAGCGGTGGT---------- 493
                      * * ** *   *    **      ** * * *** *  *** * ** *            

consensus_4632#0      GTAGAAGCGCTGCAGTGCACTTATAGTAGTAGCTAGTA-GTAGTGGTGAGCAGTATTAGC 591
consensus_4632#1      -TTGTAGTCCCTCTTTGTACTCA--ACGGCGTCAAGTGTGTCTGAGTGTGT-GTGTGAGT 549
                       * * **  *  *  ** *** *     *   * ***  **    *** *  ** * ** 

consensus_4632#0      CCGCTGGTGTAGTGCTGGAGTAGTGC-TGGGAAATCAATCAAACGCTGGCTTATTTCATT 650
consensus_4632#1      GTGTTGGTGTGTGTGTGTGGTTGTCTGCATGTGCCCACGTCGGTAATGTTTAGTGCCATT 609
                        * ******     **  ** **      *    **         **  *  *  ****

consensus_4632#0      GAGCCCGGGAAATTAGCCTCGATAAACTAGCAGGATCAGCAGCAGCAGCTCGCTTGTAAC 710
consensus_4632#1      TGAT---GCAAATCATTGTCAAAAAAAAGCCAAA--CAGTATCCTATACACACAT-TAAC 663
                             * **** *   ** * ***    **    *** * *     * * * * ****

consensus_4632#0      ACCATGTTAAATGGGGCATGTGTGCGATGTTGGGTACTACTAGACGCAGACTAAGATAT 769
consensus_4632#1      ATGA-ATAAAGTCGAAAAGATAATCTATAT----------------------------- 692
                      *  *  * ** * *   *  *   * ** *