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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4722#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1048 fasta sequence
[ACGCCTGGGGTGCCAACAGCCATGCCCAGCTGGGACTGGGCTACGCGACGGAACTATGTGAATCCCCGCAACCATTGACCGGTGTGCCGTTTCGTGCCGGCGATATAGAATGTGTCGCTGCCGGTGGTGGCCATACGCTTGTAGCGACGGTCGATGGAAGATTGTATGCTTGCGGATGGAACAACCGAGGCCAGCTTGGTTTGGGACACGTGAATCACTGTGTCCGGTTCGAGCCCGTCGGTGAGTTCGGGTTCAAGCGGCTGTACGCAGGATGGGACTCATCGGCAGGGATAAGCGCATCCGGAGACCTGTACGTATGGGGATCGAATGTGTGGCAGCAGATAGGAGAAGCAGGGGTTAAAAGTATCCCAACACCCACACGGATTGAGCTACCGGAAGGTGGACCTGTAGCGAAAGTCACCTTCGGTTTACAGTACATGGCGGTGCTGATGGAGAGCGGAAAGGTTTGGGTGTTGGGAAAATAAGCTCCGTTCGTGATGTGGTTAGTGGAGATAATCATTTGGTGCTGCTAACTGGCGACCGTCGGATCGAATGCCTTGGCGACAATAAACACGGCCAATGGCTAGCTGACAATAGCATATTGGAAGACGTTACAAAGCTTGAATCTGGATGGACCCACTCGGGATGTCTGACCGTGAATGGGACCGTGCATCTGTGGGGAAGAAAAAATTACGGACAGCTTGGACGACCGGCCCCGACTGCTAGTTCCTCAGCTCCACAAAAGCTTCAACTAGAAACAGAACAAATGGAGCTGAACGATTTTAGTTTGGGATCCCAGCACGGTGTAGCACTGACACGCGATGGACGTGTGTACTGTTGGGGCTGGAACGAGCATGGCAACTGTGGCACGGGAAGCACAGCGAATGTATTGGTTCCTACCCCGATAGACATCCCCGTGCCGGTGAGGAAGGTGATCTGCGGTGCTGGTTATACGATGGCATTCACCTTAAACACACATCATTCTTCTCGCAATGCAATCGTTTCCATCACCCACCAGTGCCATCGACCCATTTATTAACGGGCTGAA]
[+] EMBL CNS08O9I [ACGCCTGGGGTGCCAACAGCCATGCCCAGCTGGGACTGGGCTACGCGACGGAACTATGTGAATCCCCGCAACCATTGACCGGTGTGCCGTTTCGTGCCGGCGATATAGAATGTGTCGCTGCCGGTGGTGGCCATACGCTTGTAGCGACGGTCGATGGAAGATTGTATGCTTGCGGATGGAACAACCGAGGCCAGCTTGGTTTGGGACACGTGAATCACTGTGTCCGGTTCGAGCCCGTCGGTGAGTTCGGGTTCAAGCGGCTGTACGCAGGATGGGACTCATCGGCAGGGATAAGCGCATCCGGAGACCTGTACGTATGGGGATCGAATGTGTGGCAGCAGATAGGAGAAGCAGGGGTTAAAAGTATCCCAACACCCACACGGATTGAGCTACCGGAAGGTGGACCTGTAGCGAAAGTCACCTTCGGTTTACAGTACATGGCGGTGCTGATGGAGAGCGGAAAGGTTTGGGTGTTGGGAAAATAAGCTCCGTTCGTGATGTGGTTAGTGGAGATAATCATTTGGTGCTGCTAACTGGCGACCGTCGGATCGAATGCCTTGGCGACAATAAACACGGCCAATGGCTAGCTGACAATAGCATATTGGAAGACGTTACAAAGCTTGAATCTGGATGGACCCACTCGGGATGTCTGACCGTGAATGGGACCGTGCATCTGTGGGGAAGAAAAAATTACGGACAGCTTGGACGACCGGCCCCGACTGCTAGTTCCTCAGCTCCACAAAAGCTTCAACTAGAAACAGAACAAATGGAGCTGAACGATTTTAGTTTGGGATCCCAGCACGGTGTAGCACTGACACGCGATGGACGTGTGTACTGT ]
[-] EMBL CNS08O9J [ GCAGGGATAAGCGCATCCGGAGACCTGTACGTATGGGGATCGAATGTGTGGCAGCAGATAGGAGAAGCAGGGGTTAAAAGTATCCCAACACCCACACGGATTGAGCTACCGGTTTGTGGACCTGTAGCGAAAGTTTACTTCGGTTTACAGTACATGGCGGTGCTGATGGAGAGCGGAAAGGTTTGGGTGTTGGGAAAATAAGCTCCGTTCGTGATGTGGTTAGTGGAGATAATCATTTGGTGCTGCTTACTGGCGACCGTCGGATCGAATGCCTTGGCGACAATAAACACGGCCAATGGCTAGCTGACAATAGCATATTGGAAGACGTTACAAAGCTTGAATCTGGATGGACCCACTCGGGATGTCTGACCGTGAATGGGACCGTGCATCTGTGGGGAAGAAACAATTACGGACAGCTTGGACGACCGGCCCCGACTGCTAGTTCCTCAGCTCCACAAAAGCTTCAACTAGAAACAGAACAAATGGAGCTGAACGATTTTAGTTTGGGATCCCAGCACGGTGTAGCACTGACACGCGATGGACGTGTGTACTGTTGGGGCTGGAACGAGCATGGCAACTGTGGCACGGGAAGCACAGCGAATGTATTGGTTCCTACCCCGATAGACATCCCCGTGCCGGTGAGGAAGGTGATCTGCGGTGCTGGTTATACGATGGCATTCACCTTAAACACACATCATTCTTCTCGCAATGCAATCGTTTCCATCACCCACCAGTGCCATCGACCCATTTATTAACGGGCTGAA]
consensusID : consensus_4722#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 650 fasta sequence
[CCGCAGCCATGCCCAGCTGGGACTGGGCTACGCGACGGAGCAATGTGAATCCCCGCAACCATTGACCGATGTGCCGTTTCGTGCCGGCGATATAGAATGTGTCGCTGCCGGTGGTGGCCATACGCTTGTAGCGACGGTCGACGGGAGATTGTATGCTTGCGGATGGAACAACCGAGGCCAGCTTGGTTTGGGACACGCGAATGACTGTGTTCGGTTCGAGTCCGTCGGTGAGTTCGGGTTCAAGCGGCTGTACGCAGGATGGGACACATCGGCAGGGATAAGCGCATCCGGAGACCTGTACGTATGGGGATCGAATGTGTGGCAGCAGATAGGACAAGCAGGGGTTAAAAGTATCCCAACACCCACACGGATTGAGCTACCGGAAGGTGGACCTGTAGCGAAAGTAACTTTCGGTTTACAGATACATGGCGGTGCTGATGGAGAAGCGGAGAAGGTTTGGGTGTTGGGAAAATGTAAATTCCTAGCCGATTACCCGCTGGAAGTTGCATCGAAGCTAGCGATTCGATGTCTCTGGGATAGAAGCTCGGTCCGGGATGTGGTCAGTGGAGATAATCATTTGGTGCTGCTAGCCGGCGACCGTCGAATCGAATGCCTTGGCGACAACAAACATGGCCAATGGTTGGCGGGCA]
[+] EMBL BM579822 [CCGCAGCCATGCCCAGCTGGGACTGGGCTACGCGACGGAGCAATGTGAATCCCCGCAACCATTGACCGATGTGCCGTTTCGTGCCGGCGATATAGAATGTGTCGCTGCCGGTGGTGGCCATACGCTTGTAGCGACGGTCGACGGGAGATTGTATGCTTGCGGATGGAACAACCGAGGCCAGCTTGGTTTGGGACACGCGAATGACTGTGTTCGGTTCGAGTCCGTCGGTGAGTTCGGGTTCAAGCGGCTGTACGCAGGATGGGACACATCGGCAGGGATAAGCGCATCCGGAGACCTGTACGTATGGGGATCGAATGTGTGGCAGCAGATAGGACAAGCAGGGGTTAAAAGTATCCCAACACCCACACGGATTGAGCTACCGGAAGGTGGACCTGTAGCGAAAGTAACTTTCGGTTTACAGATACATGGCGGTGCTGATGGAGAAGCGGAGAAGGTTTGGGTGTTGGGAAAATGTAAATTCCTAGCCGATTACCCGCTGGAAGTTGCATCGAAGCTAGCGATTCGATGTCTCTGGGATAGAAGCTCGGTCCGGGATGTGGTCAGTGGAGATAATCATTTGGTGCTGCTAGCCGGCGACCGTCGAATCGAATGCCTTGGCGACAACAAACATGGCCAATGGTTGGCGGGCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4722#0 ACGCCTGGGGTGCCAACAGCCATGCCCAGCTGGGACTGGGCTACGCGACGGAACTATGTG 60
consensus_4722#1 -------------CCGCAGCCATGCCCAGCTGGGACTGGGCTACGCGACGGAGCAATGTG 47
* ************************************ * *****
consensus_4722#0 AATCCCCGCAACCATTGACCGGTGTGCCGTTTCGTGCCGGCGATATAGAATGTGTCGCTG 120
consensus_4722#1 AATCCCCGCAACCATTGACCGATGTGCCGTTTCGTGCCGGCGATATAGAATGTGTCGCTG 107
********************* **************************************
consensus_4722#0 CCGGTGGTGGCCATACGCTTGTAGCGACGGTCGATGGAAGATTGTATGCTTGCGGATGGA 180
consensus_4722#1 CCGGTGGTGGCCATACGCTTGTAGCGACGGTCGACGGGAGATTGTATGCTTGCGGATGGA 167
********************************** ** **********************
consensus_4722#0 ACAACCGAGGCCAGCTTGGTTTGGGACACGTGAATCACTGTGTCCGGTTCGAGCCCGTCG 240
consensus_4722#1 ACAACCGAGGCCAGCTTGGTTTGGGACACGCGAATGACTGTGTTCGGTTCGAGTCCGTCG 227
****************************** **** ******* ********* ******
consensus_4722#0 GTGAGTTCGGGTTCAAGCGGCTGTACGCAGGATGGGACTCATCGGCAGGGATAAGCGCAT 300
consensus_4722#1 GTGAGTTCGGGTTCAAGCGGCTGTACGCAGGATGGGACACATCGGCAGGGATAAGCGCAT 287
************************************** *********************
consensus_4722#0 CCGGAGACCTGTACGTATGGGGATCGAATGTGTGGCAGCAGATAGGAGAAGCAGGGGTTA 360
consensus_4722#1 CCGGAGACCTGTACGTATGGGGATCGAATGTGTGGCAGCAGATAGGACAAGCAGGGGTTA 347
*********************************************** ************
consensus_4722#0 AAAGTATCCCAACACCCACACGGATTGAGCTACCGGAAGGTGGACCTGTAGCGAAAGTCA 420
consensus_4722#1 AAAGTATCCCAACACCCACACGGATTGAGCTACCGGAAGGTGGACCTGTAGCGAAAGTAA 407
********************************************************** *
consensus_4722#0 CCTTCGGTTTACAG-TACATGGCGGTGCTGATGGAGA-GCGGA-AAGGTTTGGGTGTTGG 477
consensus_4722#1 CTTTCGGTTTACAGATACATGGCGGTGCTGATGGAGAAGCGGAGAAGGTTTGGGTGTTGG 467
* ************ ********************** ***** ****************
consensus_4722#0 GAAAATAAGCTCCGTTCGTGATGTGGTTAGTGGAGATAATCATTTGGTGCTGCTAACTGG 537
consensus_4722#1 GAAAATGTAAATTCCTAGCCGATTACCCGCTGGAAGTTG-CATCGAAGCTAGCGATTCGA 526
****** * * * **** * *** ** * *
consensus_4722#0 CGACCGTCGGATCGAATGCCTTGGCGACAATAAACACGGCCAATGGCTAGCTGACAATAG 597
consensus_4722#1 TGTCTCTGGGATAGAA-GCTCGGTCCGGGAT----GTGGTCAGTGG--AGATAATCATTT 579
* * * **** *** ** * * ** ** ** *** ** * * **
consensus_4722#0 CATATTGGAAGACGTTACAAAGCTTGAATCTGGATGGACCCACTCGGGATGTCTGACCGT 657
consensus_4722#1 GGTGCTGCTAGCCG--GCGACCGTCGAATC-GAATG-----CCTTGG------CGACAAC 625
* ** ** ** * * * ***** * *** ** ** ***
consensus_4722#0 GAATGGGACCGTGCATCTGTGGGGAAGAAAAAATTACGGACAGCTTGGACGACCGGCCCC 717
consensus_4722#1 AAACATGGCCAATGGTTGGCGGGCA----------------------------------- 650
** * ** * * *** *
consensus_4722#0 GACTGCTAGTTCCTCAGCTCCACAAAAGCTTCAACTAGAAACAGAACAAATGGAGCTGAA 777
consensus_4722#1 ------------------------------------------------------------
consensus_4722#0 CGATTTTAGTTTGGGATCCCAGCACGGTGTAGCACTGACACGCGATGGACGTGTGTACTG 837
consensus_4722#1 ------------------------------------------------------------
consensus_4722#0 TTGGGGCTGGAACGAGCATGGCAACTGTGGCACGGGAAGCACAGCGAATGTATTGGTTCC 897
consensus_4722#1 ------------------------------------------------------------
consensus_4722#0 TACCCCGATAGACATCCCCGTGCCGGTGAGGAAGGTGATCTGCGGTGCTGGTTATACGAT 957
consensus_4722#1 ------------------------------------------------------------
consensus_4722#0 GGCATTCACCTTAAACACACATCATTCTTCTCGCAATGCAATCGTTTCCATCACCCACCA 1017
consensus_4722#1 ------------------------------------------------------------
consensus_4722#0 GTGCCATCGACCCATTTATTAACGGGCTGAA 1048
consensus_4722#1 -------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||