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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4762#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 675 fasta sequence
[CCGTACAGAATGGGTCGCTTCACCTTACTGGCAGCGCTTTTCGCTGGATTAGTGTGTTTGATCGATCTTTCTCCAGCCTTAGCCCATCCAAGTGCAATTAAACCACCTACCGATGCGTCGCAAATGCCAAACATCCCCAGTCCGGGCGATTTTCCCAGGCCACCCGGAATGCTGCACAATCGGGTATCACGTCAGGCTCCACCTGAAATTCCCGGACAAGATCAATTCCCTCCACCGCCGCCGCCACCGCCCCAGATGCCTCAGATGGTTTGATTCCTTTACCCACGGCAATGTACACGCTTTCTCGAACGCTTCATCTTACGTCCTATCCAACACACACTTTCCCACACTTCCATTTACACCACCATCCTCTTACAGAGATCCCGTCGAAACGCTAGGACATCGATCGAAATGACCAACATTCTGCCGGCACTTGAAACCATATCGTACATTTCGGTGGCACGTGACAAACGAGCCGCCAAGGGCACTGGAGGCAAGCTACCCAGTAAGGCTGGATGAAAAGCAGAAGAGCAAACCTGATTCCTTCAACGATGTTTCTTAGCTGATGAGTTCGCTTTCCCTTTGTTGCCCGTTATCCATAATATATAGGGGGTGTGACGAATAGCATATTCATATGTACTACAATCAAATAAATTACCATGCAAGCAATGAATG]
[+] EMBL BM629443 [CCGTACAGAATGGGTCGCTTCACCTTACTGGCAGCGCTTTTCGCTGGATTAGTGTGTTTGATCGATCTTTCTCCAGCCTTAGCCCATCCAAGTGCAATTAAACCACCTACCGATGCGTCGCAAATGCCAAACATCCCCAGTCCGGGCGATTTTCCCAGGCCACCCGGAATGCTGCACAATCGGGTATCACGTCAGGCTCCACCTGAAATTCCCGGACAAGATCAATTCCCTCCACCGCCGCCGCCACCGCCCCAGATGCCTCAGATGGTTTGATTCCTTTACCCACGGCAATGTACACGCTTTCTCGAACGCTTCATCTTACGTCCTATCCAACACACACTTTCCCACACTTCCATTTACACCACCATCCTCTTACAGAGATCCCGTCGAAACGCTAGGACATCGATCGAAATGACCAACATTCTGCCGGCACTTGAAACCATATCGTACATTTCGGTGGCACGTGACAAACGAGCCGCCAAGGGCACTGGAGGCAAGCTACCCAGTAAGGCTGGATGAAAAGCAGAAGAGCAAACCTGATTCCTTCAACGATGTTTCTTAGCTGATGAGTTCGCTTTCCCTTTGTTGCCCGTTATCCATAATATATAGGGGGTGTGACGAATAGCATATTCATATGTACTACAATCAAATAAATTACCATGCAAGCAATGAATG]
[+] EMBL BM654867 [ ccgatAGATCCCGTCGAAACGCTAGGACATCGATCGAAATGACCAACATTCTGCCGGCACTTGAAACCATATCGTACATTTCGGTGGCACGTGACAAACGAGCCGCCAAGGGCACTGGAGGCAAGCTACCCAGTAAGGCTGGATGAAAAGCAGAAGAGCAAACCTGATTCCTTCAACGATGTTTCTTAGCTGATGAGTTCGCTTTCCCTTTGTTGCCCGTTATCCATAATATATAGGGGGTGTGACGAATAGCATATTCATATGTACTACAATCAAATAAATTACCATGCAAGC ]
consensusID : consensus_4762#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 566 fasta sequence
[CCGCAACATTATACAGAATGGGTCGCTTCACCTTACTGGCAGCGCTTTTCGCTGGATTAGTGTGTTTGATCGATCTTTCTCCAGCCTTAGCCCATCCAAGTGCAATTAAACCGCCTACCGATGCGTCGCAAATGCCAAACATCCCCAGTCCGGGCGATTTTCCCAGGCCACCCGGAATGCTGCACAATCGGGTATCACGTCAGGCTCCACCTGAAATTCCCGGACAAGATCAATTCCCTCCACCGCCGCCGCCACCGCCCCAGATGCCTCAGATGGTTTGATTCCTTTACCCACGGCAATAGATCCCGTCGAAACGCTAGGACATCGATCGAAATGACCAACATTCTGCCGGCACTTGAAACCATATCGTACATTTCGGTGGCACGTGACAAACGAGCCGCCAAGGGCACTGGAGGCAAGCTACCCAGTAAGGCTGGATGAAAAGCAGAAGAGCAAACCTGATTCCTTCAACGATGTTTCTTAGCTGATGAGTTCGCTTTCCCTTTGTTGCCCGTTATCCATAATATATTAGGGGGTGTGACGAATAGCATATTCATATGTACTAC]
[+] EMBL BM576822 [CCGCAACATTATACAGAATGGGTCGCTTCACCTTACTGGCAGCGCTTTTCGCTGGATTAGTGTGTTTGATCGATCTTTCTCCAGCCTTAGCCCATCCAAGTGCAATTAAACCGCCTACCGATGCGTCGCAAATGCCAAACATCCCCAGTCCGGGCGATTTTCCCAGGCCACCCGGAATGCTGCACAATCGGGTATCACGTCAGGCTCCACCTGAAATTCCCGGACAAGATCAATTCCCTCCACCGCCGCCGCCACCGCCCCAGATGCCTCAGATGGTTTGATTCCTTTACCCACGGCAATAGATCCCGTCGAAACGCTAGGACATCGATCGAAATGACCAACATTCTGCCGGCACTTGAAACCATATCGTACATTTCGGTGGCACGTGACAAACGAGCCGCCAAGGGCACTGGAGGCAAGCTACCCAGTAAGGCTGGATGAAAAGCAGAAGAGCAAACCTGATTCCTTCAACGATGTTTCTTAGCTGATGAGTTCGCTTTCCCTTTGTTGCCCGTTATCCATAATATATTAGGGGGTGTGACGAATAGCATATTCATATGTACTAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4762#0 --------CCGTACAGAATGGGTCGCTTCACCTTACTGGCAGCGCTTTTCGCTGGATTAG 52
consensus_4762#1 CCGCAACATTATACAGAATGGGTCGCTTCACCTTACTGGCAGCGCTTTTCGCTGGATTAG 60
*************************************************
consensus_4762#0 TGTGTTTGATCGATCTTTCTCCAGCCTTAGCCCATCCAAGTGCAATTAAACCACCTACCG 112
consensus_4762#1 TGTGTTTGATCGATCTTTCTCCAGCCTTAGCCCATCCAAGTGCAATTAAACCGCCTACCG 120
**************************************************** *******
consensus_4762#0 ATGCGTCGCAAATGCCAAACATCCCCAGTCCGGGCGATTTTCCCAGGCCACCCGGAATGC 172
consensus_4762#1 ATGCGTCGCAAATGCCAAACATCCCCAGTCCGGGCGATTTTCCCAGGCCACCCGGAATGC 180
************************************************************
consensus_4762#0 TGCACAATCGGGTATCACGTCAGGCTCCACCTGAAATTCCCGGACAAGATCAATTCCCTC 232
consensus_4762#1 TGCACAATCGGGTATCACGTCAGGCTCCACCTGAAATTCCCGGACAAGATCAATTCCCTC 240
************************************************************
consensus_4762#0 CACCGCCGCCGCCACCGCCCCAGATGCCTCAGATGGTTTGATTCCTTTACCCACGGCAAT 292
consensus_4762#1 CACCGCCGCCGCCACCGCCCCAGATGCCTCAGATGGTTTGATTCCTTTACCCACGGCAAT 300
************************************************************
consensus_4762#0 GTACACGCTTTCTCGAACGCTTCATCTTACGTCCTATCCAACACACACTTTCCCACACTT 352
consensus_4762#1 ------------------------------------------------------------
consensus_4762#0 CCATTTACACCACCATCCTCTTACAGAGATCCCGTCGAAACGCTAGGACATCGATCGAAA 412
consensus_4762#1 --------------------------AGATCCCGTCGAAACGCTAGGACATCGATCGAAA 334
**********************************
consensus_4762#0 TGACCAACATTCTGCCGGCACTTGAAACCATATCGTACATTTCGGTGGCACGTGACAAAC 472
consensus_4762#1 TGACCAACATTCTGCCGGCACTTGAAACCATATCGTACATTTCGGTGGCACGTGACAAAC 394
************************************************************
consensus_4762#0 GAGCCGCCAAGGGCACTGGAGGCAAGCTACCCAGTAAGGCTGGATGAAAAGCAGAAGAGC 532
consensus_4762#1 GAGCCGCCAAGGGCACTGGAGGCAAGCTACCCAGTAAGGCTGGATGAAAAGCAGAAGAGC 454
************************************************************
consensus_4762#0 AAACCTGATTCCTTCAACGATGTTTCTTAGCTGATGAGTTCGCTTTCCCTTTGTTGCCCG 592
consensus_4762#1 AAACCTGATTCCTTCAACGATGTTTCTTAGCTGATGAGTTCGCTTTCCCTTTGTTGCCCG 514
************************************************************
consensus_4762#0 TTATCCATAATATAT-AGGGGGTGTGACGAATAGCATATTCATATGTACTACAATCAAAT 651
consensus_4762#1 TTATCCATAATATATTAGGGGGTGTGACGAATAGCATATTCATATGTACTAC-------- 566
*************** ************************************
consensus_4762#0 AAATTACCATGCAAGCAATGAATG 675
consensus_4762#1 ------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||