cluster # 4769

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Anopheles gambiae
cluster # 4769 cluster # 4769 Sequences # 3 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4769#0 length = 1159 sequences # 2

consensus_4769#1 length = 613 sequences # 1

consensusID : consensus_4769#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1159
fasta sequence

                              [CCGAAGCGTCATCGTCAGCAGCAGCAGCAGCATCGGTGTAAAAGTGGATGCATCGTGCTGAGCTGACAAGAGAAGCAGTACTTTACATTAACGCTAACACGCCCTAATCGCGGCCGTTGTAGTTCATCACGAAGAGCGGGCGCAGATACGTTGTGACGACAGCAGACGACGACGACGTGGTCGCTTCCGGTCGCGAGCAGCAAAGACGCGAGCGTGTGTGTGTGCGTGTGTGTACCGGGGGGGAGGGTATTGTGCTTGCGGTGTAATTGCGTTGGGTGAGGAACAAGCGTAACGAGTCGCCAGCTGGGTATAAAGGGGGAAAGCAACCGCATCCAAGATGGCACCGGTACGTGGGGATGGAATGCGCGGACTGGCCGTGTTCATATCGGACATCAGGAACTGCAAAAGCAAAGAGGCGGAAATCAAGCGCATCAACAAGGAGCTGGCCAACATTCGGAGCAAATTCAAAGGGGACAAAACGCTGGACGGCTACCAAGAAGAAGAAGTACGTGTGCAAGCTGCTGTTCATCTTTCTGCTCGGCCATGACATCGATTTCGGCCACCATGGAGGCGGTCAATCTGCTGTCCTCCAACAAATACTCGGAGAAACAAATCGGCTATCTGTTCATCTCCGGTGCTGGTGAACACGAACAGCGATCTGATCAAGCTGATCATCCAAAGCATCAAGAACGATCTGCAGTCGCGCAATCCGATCCACGTCAATCTGGCGCTGCAGTGCATCGCCAACATCGGCAGCCAGGATATGGCGGAAGCGTTCTCGAACGAAATCCCGAAGCTGCTCGTGTCGGGCGACACGATGGACGTGGTGAAGCAGTCGGCCGCGCTGTGCCTGCTGCGGCTGTTCCGCACCTGCCCGGACATCATCCCGGGCGGCGAGTGGACCAGCCGGATCATCCATCTGCTGAACGATCAGCATATGGGCGTGGTGACGGCGGCGACCAGCCTGATCGATGCGCTGGTCAAGAAAAACCCGGAAGAGTACAAGGGCTGCGTCAGCTTGGCCGTGTCGCGCCTGTCCCGCATCGTGACCGCTTCGTACACGGATCTGCAGGACTACACGTACTACTTTGTGCCGGCGCCGTGGCTGTCGGTGAAGCTGCTGCGCCTGCTGCAGAACTACAACCCGCCGACGGAGGAT]

[+] EMBL BM576846             [CCGAAGCGTCATCGTCAGCAGCAGCAGCAGCATCGGTGTAAAAGTGGATGCATCGTGCTGAGCTGACAAGAGAAGCAGTACTTTACATTAACGCTAACACGCCCTAATCGCGGCCGTTGTAGTTCATCACGAAGAGCGGGCGCAGATACGTTGTGACGACAGCAGACGACGACGACGTGGTCGCTTCCGGTCGCGAGCAGCAAAGACGCGAGCGTGTGTGTGTGCGTGTGTGTACCGGGGGGGAGGGTATTGTGCTTGCGGTGTAATTGCGTTGGGTGAGGAACAAGCGTAACGAGTCGCCAGCTGGGTATAAAGGGGGAAAGCAACCGCATCCAAGATGGCACCGGTACGTGGGGATGGAATGCGCGGACTGGCCGTGTTCATATCGGACATCAGGAACTGCAAAAGCAAAGAGGCGGAAATCAAGCGCATCAACAAGGAGCTGGCCAACATTCGGAGCAAATTCAAAGGGGACAAAACGCTGGACGGCTACCAAGAAGAAGAAGTACGTGTGCAAGCTGCTGTTCATCTTTCTGCTCGGCCATGACATCGATTTCGGCCACCATGGAGGCGGTCAATCTGCTGTCCTCCAACAAATACTCGGAGAAACAAATCGGCTATCTGTTCATCTCCGGTGCTGGTGAACACGAACAGCGATCTGATCAAGCTGATCATCCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM599520             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ccGCTGCTGTTCATCTTTCTGCTCGGCCATGACATCGATTTCGGCCA CATGGAGGCGGTCAATCTGCTGTCCTCCAACAAATACTCGGAGAAACAAATCGGCTATCTGTTCATCT CGGTGCTGGTGAACACGAACAGCGATCTGATCAAGCTGATCATCCAAAGCATCAAGAACGATCTGCAGTCGCGCAATCCGATCCACGTCAATCTGGCGCTGCAGTGCATCGCCAACATCGGCAGCCAGGATATGGCGGAAGCGTTCTCGAACGAAATCCCGAAGCTGCTCGTGTCGGGCGACACGATGGACGTGGTGAAGCAGTCGGCCGCGCTGTGCCTGCTGCGGCTGTTCCGCACCTGCCCGGACATCATCCCGGGCGGCGAGTGGACCAGCCGGATCATCCATCTGCTGAACGATCAGCATATGGGCGTGGTGACGGCGGCGACCAGCCTGATCGATGCGCTGGTCAAGAAAAACCCGGAAGAGTACAAGGGCTGCGTCAGCTTGGCCGTGTCGCGCCTGTCCCGCATCGTGACCGCTTCGTACACGGATCTGCAGGACTACACGTACTACTTTGTGCCGGCGCCGTGGCTGTCGGTGAAGCTGCTGCGCCTGCTGCAGAACTACAACCCGCCGACGGAGGAT]




>consensus_4769#0
CCGAAGCGTCATCGTCAGCAGCAGCAGCAGCATCGGTGTAAAAGTGGATGCATCGTGCTG
AGCTGACAAGAGAAGCAGTACTTTACATTAACGCTAACACGCCCTAATCGCGGCCGTTGT
AGTTCATCACGAAGAGCGGGCGCAGATACGTTGTGACGACAGCAGACGACGACGACGTGG
TCGCTTCCGGTCGCGAGCAGCAAAGACGCGAGCGTGTGTGTGTGCGTGTGTGTACCGGGG
GGGAGGGTATTGTGCTTGCGGTGTAATTGCGTTGGGTGAGGAACAAGCGTAACGAGTCGC
CAGCTGGGTATAAAGGGGGAAAGCAACCGCATCCAAGATGGCACCGGTACGTGGGGATGG
AATGCGCGGACTGGCCGTGTTCATATCGGACATCAGGAACTGCAAAAGCAAAGAGGCGGA
AATCAAGCGCATCAACAAGGAGCTGGCCAACATTCGGAGCAAATTCAAAGGGGACAAAAC
GCTGGACGGCTACCAAGAAGAAGAAGTACGTGTGCAAGCTGCTGTTCATCTTTCTGCTCG
GCCATGACATCGATTTCGGCCACCATGGAGGCGGTCAATCTGCTGTCCTCCAACAAATAC
TCGGAGAAACAAATCGGCTATCTGTTCATCTCCGGTGCTGGTGAACACGAACAGCGATCT
GATCAAGCTGATCATCCAAAGCATCAAGAACGATCTGCAGTCGCGCAATCCGATCCACGT
CAATCTGGCGCTGCAGTGCATCGCCAACATCGGCAGCCAGGATATGGCGGAAGCGTTCTC
GAACGAAATCCCGAAGCTGCTCGTGTCGGGCGACACGATGGACGTGGTGAAGCAGTCGGC
CGCGCTGTGCCTGCTGCGGCTGTTCCGCACCTGCCCGGACATCATCCCGGGCGGCGAGTG
GACCAGCCGGATCATCCATCTGCTGAACGATCAGCATATGGGCGTGGTGACGGCGGCGAC
CAGCCTGATCGATGCGCTGGTCAAGAAAAACCCGGAAGAGTACAAGGGCTGCGTCAGCTT
GGCCGTGTCGCGCCTGTCCCGCATCGTGACCGCTTCGTACACGGATCTGCAGGACTACAC
GTACTACTTTGTGCCGGCGCCGTGGCTGTCGGTGAAGCTGCTGCGCCTGCTGCAGAACTA
CAACCCGCCGACGGAGGAT

consensusID : consensus_4769#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 613
fasta sequence

                              [CCGCCCACGCGTCCGATCGGCTATCTGTTCATCTCGGTGCTGGTGAACACGAACAGCGATCTGATCAAGCTGATCATCCAAAGCATCAAGAACGATCTGCAGTCGCGCAATCCGATCCACGTCAATCTGGCGCTGCAGTGCATCGCCAACATCGGCAGCCAGGATATGGCGGAAGCGTTCTCGAACGAAATCCCGAAGCTGCTCGTGTCGGGCGACACGATGGACGTGGTGAAGCAGTCGGCCGCGCTGTGCCTGCTGCGGCTGTTCCGCACCTGCCCGGACATCATCCCGGGCGGCGAGTGGACCAGCCGGATCATCCATCTGCTGAACGATCAGCATATGGGCGTGGTGACGGCGGCGACCAGCCTGATCGATGCGCTGGTCAAGAAAAACCCGGAAGAGTACAAGGGCTGCGTCAGCTTGGCCGTGTCGCGCCTGTCCCGCATCGTGACCGCTTCGTACACGGATCTGCAGGACTACACGTACTACTTTGTGCCGGCGCCGTGGCTGTCGGTGAAGCTGCTGCGCCTGCTGCAGAACTACAACCCGCCGACGGAGGATCCGGGCGTGCGCGGTCGGCTGAACGAGTGTCTGGAGACGATACTGAACAAGG]

[+] EMBL BM614811             [CCGCCCACGCGTCCGATCGGCTATCTGTTCATCTCGGTGCTGGTGAACACGAACAGCGATCTGATCAAGCTGATCATCCAAAGCATCAAGAACGATCTGCAGTCGCGCAATCCGATCCACGTCAATCTGGCGCTGCAGTGCATCGCCAACATCGGCAGCCAGGATATGGCGGAAGCGTTCTCGAACGAAATCCCGAAGCTGCTCGTGTCGGGCGACACGATGGACGTGGTGAAGCAGTCGGCCGCGCTGTGCCTGCTGCGGCTGTTCCGCACCTGCCCGGACATCATCCCGGGCGGCGAGTGGACCAGCCGGATCATCCATCTGCTGAACGATCAGCATATGGGCGTGGTGACGGCGGCGACCAGCCTGATCGATGCGCTGGTCAAGAAAAACCCGGAAGAGTACAAGGGCTGCGTCAGCTTGGCCGTGTCGCGCCTGTCCCGCATCGTGACCGCTTCGTACACGGATCTGCAGGACTACACGTACTACTTTGTGCCGGCGCCGTGGCTGTCGGTGAAGCTGCTGCGCCTGCTGCAGAACTACAACCCGCCGACGGAGGATCCGGGCGTGCGCGGTCGGCTGAACGAGTGTCTGGAGACGATACTGAACAAGG]




>consensus_4769#1
CCGCCCACGCGTCCGATCGGCTATCTGTTCATCTCGGTGCTGGTGAACACGAACAGCGAT
CTGATCAAGCTGATCATCCAAAGCATCAAGAACGATCTGCAGTCGCGCAATCCGATCCAC
GTCAATCTGGCGCTGCAGTGCATCGCCAACATCGGCAGCCAGGATATGGCGGAAGCGTTC
TCGAACGAAATCCCGAAGCTGCTCGTGTCGGGCGACACGATGGACGTGGTGAAGCAGTCG
GCCGCGCTGTGCCTGCTGCGGCTGTTCCGCACCTGCCCGGACATCATCCCGGGCGGCGAG
TGGACCAGCCGGATCATCCATCTGCTGAACGATCAGCATATGGGCGTGGTGACGGCGGCG
ACCAGCCTGATCGATGCGCTGGTCAAGAAAAACCCGGAAGAGTACAAGGGCTGCGTCAGC
TTGGCCGTGTCGCGCCTGTCCCGCATCGTGACCGCTTCGTACACGGATCTGCAGGACTAC
ACGTACTACTTTGTGCCGGCGCCGTGGCTGTCGGTGAAGCTGCTGCGCCTGCTGCAGAAC
TACAACCCGCCGACGGAGGATCCGGGCGTGCGCGGTCGGCTGAACGAGTGTCTGGAGACG
ATACTGAACAAGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4769#0      CCGAAGCGTCATCGTCAGCAGCAGCAGCAGCATCGGTGTAAAAGTGGATGCATCGTGCTG 60
consensus_4769#1      ------------------------------------------------------------
                                                                                  

consensus_4769#0      AGCTGACAAGAGAAGCAGTACTTTACATTAACGCTAACACGCCCTAATCGCGGCCGTTGT 120
consensus_4769#1      ------------------------------------------------------------
                                                                                  

consensus_4769#0      AGTTCATCACGAAGAGCGGGCGCAGATACGTTGTGACGACAGCAGACGACGACGACGTGG 180
consensus_4769#1      ------------------------------------------------------------
                                                                                  

consensus_4769#0      TCGCTTCCGGTCGCGAGCAGCAAAGACGCGAGCGTGTGTGTGTGCGTGTGTGTACCGGGG 240
consensus_4769#1      ------------------------------------------------------------
                                                                                  

consensus_4769#0      GGGAGGGTATTGTGCTTGCGGTGTAATTGCGTTGGGTGAGGAACAAGCGTAACGAGTCGC 300
consensus_4769#1      ------------------------------------------------------------
                                                                                  

consensus_4769#0      CAGCTGGGTATAAAGGGGGAAAGCAACCGCATCCAAGATGGCACCGGTACGTGGGGATGG 360
consensus_4769#1      ------------------------------------------------------------
                                                                                  

consensus_4769#0      AATGCGCGGACTGGCCGTGTTCATATCGGACATCAGGAACTGCAAAAGCAAAGAGGCGGA 420
consensus_4769#1      ------------------------------------------------------------
                                                                                  

consensus_4769#0      AATCAAGCGCATCAACAAGGAGCTGGCCAACATTCGGAGCAAATTCAAAGGGGACAAAAC 480
consensus_4769#1      ------------------------------------------------------------
                                                                                  

consensus_4769#0      GCTGGACGGCTACCAAGAAGAAGAAGTACGTGTGCAAGCTGCTGTTCATCTTTCTGCTCG 540
consensus_4769#1      ------------------------------------------------------------
                                                                                  

consensus_4769#0      GCCATGACATCGATTTCGGCCACCATGGAGGCGGTCAATCTGCTGTCCTCCAACAAATAC 600
consensus_4769#1      ---------------------------------------------------------CCG 3
                                                                                  

consensus_4769#0      TCGGAGAAACAAATCGGCTATCTGTTCATCTCCGGTGCTGGTGAACACGAACAGCGATCT 660
consensus_4769#1      CCCACGCGTCCGATCGGCTATCTGTTCATCTC-GGTGCTGGTGAACACGAACAGCGATCT 62
                       *   *   *  ******************** ***************************

consensus_4769#0      GATCAAGCTGATCATCCAAAGCATCAAGAACGATCTGCAGTCGCGCAATCCGATCCACGT 720
consensus_4769#1      GATCAAGCTGATCATCCAAAGCATCAAGAACGATCTGCAGTCGCGCAATCCGATCCACGT 122
                      ************************************************************

consensus_4769#0      CAATCTGGCGCTGCAGTGCATCGCCAACATCGGCAGCCAGGATATGGCGGAAGCGTTCTC 780
consensus_4769#1      CAATCTGGCGCTGCAGTGCATCGCCAACATCGGCAGCCAGGATATGGCGGAAGCGTTCTC 182
                      ************************************************************

consensus_4769#0      GAACGAAATCCCGAAGCTGCTCGTGTCGGGCGACACGATGGACGTGGTGAAGCAGTCGGC 840
consensus_4769#1      GAACGAAATCCCGAAGCTGCTCGTGTCGGGCGACACGATGGACGTGGTGAAGCAGTCGGC 242
                      ************************************************************

consensus_4769#0      CGCGCTGTGCCTGCTGCGGCTGTTCCGCACCTGCCCGGACATCATCCCGGGCGGCGAGTG 900
consensus_4769#1      CGCGCTGTGCCTGCTGCGGCTGTTCCGCACCTGCCCGGACATCATCCCGGGCGGCGAGTG 302
                      ************************************************************

consensus_4769#0      GACCAGCCGGATCATCCATCTGCTGAACGATCAGCATATGGGCGTGGTGACGGCGGCGAC 960
consensus_4769#1      GACCAGCCGGATCATCCATCTGCTGAACGATCAGCATATGGGCGTGGTGACGGCGGCGAC 362
                      ************************************************************

consensus_4769#0      CAGCCTGATCGATGCGCTGGTCAAGAAAAACCCGGAAGAGTACAAGGGCTGCGTCAGCTT 1020
consensus_4769#1      CAGCCTGATCGATGCGCTGGTCAAGAAAAACCCGGAAGAGTACAAGGGCTGCGTCAGCTT 422
                      ************************************************************

consensus_4769#0      GGCCGTGTCGCGCCTGTCCCGCATCGTGACCGCTTCGTACACGGATCTGCAGGACTACAC 1080
consensus_4769#1      GGCCGTGTCGCGCCTGTCCCGCATCGTGACCGCTTCGTACACGGATCTGCAGGACTACAC 482
                      ************************************************************

consensus_4769#0      GTACTACTTTGTGCCGGCGCCGTGGCTGTCGGTGAAGCTGCTGCGCCTGCTGCAGAACTA 1140
consensus_4769#1      GTACTACTTTGTGCCGGCGCCGTGGCTGTCGGTGAAGCTGCTGCGCCTGCTGCAGAACTA 542
                      ************************************************************

consensus_4769#0      CAACCCGCCGACGGAGGAT----------------------------------------- 1159
consensus_4769#1      CAACCCGCCGACGGAGGATCCGGGCGTGCGCGGTCGGCTGAACGAGTGTCTGGAGACGAT 602
                      *******************                                         

consensus_4769#0      -----------
consensus_4769#1      ACTGAACAAGG 613