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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4903#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 812 fasta sequence
[CGAGCAGAACCGGCTCGAGTTTGCGGTGTAGATACTCGAGCAGGGCTTCTACACGGTGCCGGTGTACAAGCAGCGCGAACCGACGCCCCCGCCCGACTACCTCGCCGCGGAGCGGGCGATGATGCCGGGCCCGATGGACATCGGGGACGACGCGCTCCGGCCGATCACGAGCAGCGAGTGCCGGTTTCTGGTGCGCTTCCTCTACCAGCTCAGCAGCAAGCTGAACGTGATGTTCGGCGACGACCTGCAGCGGCTGTGGCACCGGGACGGGCTCGTCGGCCGGCTGGCGCGCCGCACGCTCGAGCCGCCCACCACCATCTCGGAGTTTACCCGCATGCCGATCTGCACGCACGGCTCGAAAACGCTCGTTCGGACGAAGGTGGGCCCGCGCATCAGCCTGCGCTTTCTTGCCTCCTACACCTCGATCGTCACCGTCAGCTGCTCGTTCCTGGCCGGCTACCTTTTGTTCGGCACGCCGAGCTACGGCTTTATCGCCCTGCTGCTGGTGGCGTTCCTGTACATACTGGTCAAACCGGAAGGCAAGGCAAAGCACCGCACGCCCTAGCGCACTTCGAGTGAGGCGGGGGGTCTGGGCGATTTCCTGTATATTTACTTTTTATAAGTACCAAATGCCAATGGTACCAACGCGTGCATGGAAGGAATTGGCATAGATTATATTTAGACCATATGCTAAGCGAGGTAGAACGAGCGCAGTAAACCAATCGAATGCTCTGTGTGTACGCGTGTGTGTTGCCATCGTTGTCCGTGCGTCAGATGCGTGGAAGCTCACCTGTGTGCAGTTCTTCTGCACC]
[+] EMBL BX606162 [CGAGCAGAACCGGCTCGAGTTTGCGGTGTAGATACTCGAGCAGGGCTTCTACACGGTGCCGGTGTACAAGCAGCGCGAACCGACGCCCCCGCCCGACTACCTCGCCGCGGAGCGGGCGATGATGCCGGGCCCGATGGACATCGGGGACGACGCGCTCCGGCCGATCACGAGCAGCGAGTGCCGGTTTCTGGTGCGCTTCCTCTACCAGCTCAGCAGCAAGCTGAACGTGATGTTCGGCGACGACCTGCAGCGGCTGTGGCACCGGGACGGGCTCGTCGGCCGGCTGGCGCGCCGCACGCTCGAGCCGCCCACCACCATCTCGGAGTTTACCCGCATGCCGATCTGCACGCACGGCTCGAAAACGCTCGTTCGGACGAAGGTGGGCCCGCGCATCAGCCTGCGCTTTCTTGCCTCCTACACCTCGATCGTCACCGTCAGCTGCTCGTTCCTGGCCGGCTACCTTTTGTTCGGCACGCCGAGCTACGGCTTTATCGCCCTGCTGCTGGTGGCGTTCCTGTACATACTGGTCAAACCGGAAGGCAAGGCAAAGCACCGCACGCCCTAGCGCACTTCGAGTGAGGCGGGGGGTCTGGGCGATTTCCTGTATATTTACTTTTTATAAGTACCAAATGCCAATGGTACCAACGCGTGCATGGAAGGAATTGGCATAGATTATATTTAGACCATATGCTAAGCGAGGTAGAACGAGCGCAGTAAACCAATCGAATGCTCTGTGTGTACGCGTGTGTGTTGCCATCGTTGTCCGTGCGTCAGATGCGTGGAAGCTCACCTGTGTGCAGTTCTTCTGCACC]
consensusID : consensus_4903#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 762 fasta sequence
[GGCACCGGGACGGGCTCGTCGGCCGGCTGGCGCGCCGCACGCTCGAGCCGCCCACCACCATCTCGGAGTTTACCCGCATGCCGATCTGCACGCACGGCTCGAAAACGCTCGTACGGACGAAGGTGGGCCCGCGCATCAGCCTGCGCTTTCTTGCCTCCTACACCTCGATCGTCACCGTCAGCTGCTCGTTCCTGGCCGGCTACCTTTTGTTCGGCACGCCGAGCTACGGCTTTATCGCCCTGCTGCTGGTGGCGTTCCTGTACATACTGGTCAAACCGGAAGGCAAGGCAAAGCACCGCACGCCCTAGCGCACTTCGGGTGAGGCGGGGGGTTTGGGCGATTTCCTGTATATTTACTTTTTATAAGTACCAAATGCCAATGGTACCAACGCGTGCATGGAAGGAATTGGCATAGATTATATTTAGACCATATGCTAAGCTAGGTAGAACGAGCGCAGTAAACCAATCGAATGCTCTGTGTGTACGCGTGTGTGTTGCCATCGTTGTCCGTGCGTCAGATGCGTGGAAGCTCACCTAACGCCGCGCCACAAAGCAAATCACAAGCTGTGTGCAGTTCTTCTGCACCTTAGGATAGAAAGGGAAAATTATAGTATATTTACTTCGTTAGTAAAATATTCAAACAAAACCTTTGAGCCTGTTTACGTTGAATTTAATTTTCACGAACTGAATTATTCACCATTGTACAATAGTTCACTGAGCAATAGTTTCTTCAGGTTAAATAAAAATAAACCCTGAAAAAAAA]
[+] EMBL BX614657 [GGCACCGGGACGGGCTCGTCGGCCGGCTGGCGCGCCGCACGCTCGAGCCGCCCACCACCATCTCGGAGTTTACCCGCATGCCGATCTGCACGCACGGCTCGAAAACGCTCGTACGGACGAAGGTGGGCCCGCGCATCAGCCTGCGCTTTCTTGCCTCCTACACCTCGATCGTCACCGTCAGCTGCTCGTTCCTGGCCGGCTACCTTTTGTTCGGCACGCCGAGCTACGGCTTTATCGCCCTGCTGCTGGTGGCGTTCCTGTACATACTGGTCAAACCGGAAGGCAAGGCAAAGCACCGCACGCCCTAGCGCACTTCGGGTGAGGCGGGGGGTTTGGGCGATTTCCTGTATATTTACTTTTTATAAGTACCAAATGCCAATGGTACCAACGCGTGCATGGAAGGAATTGGCATAGATTATATTTAGACCATATGCTAAGCTAGGTAGAACGAGCGCAGTAAACCAATCGAATGCTCTGTGTGTACGCGTGTGTGTTGCCATCGTTGTCCGTGCGTCAGATGCGTGGAAGCTCACCTAACGCCGCGCCACAAAGCAAATCACAAGCTGTGT ]
[+] EMBL BX614352 [ GACGGGCTCGTCGGCCGGCTGGCGCGCCGCACGCTCGAGCCGCCCACCACCATCTCGGAGTTTACCCGCATGCCGATCTGCACGCACGGCTCGAAAACGCTCGTACGGACGAAGGTGGGCCCGCGCATCAGCCTGCGCTTTCTTGCCTCCTACACCTCGATCGTCACCGTCAGCTGCTCGTTCCTGGCCGGCTACCTTTTGTTCGGCACGCCGAGCTACGGCTTTATCGCCCTGCTGCTGGTGGCGTTCCTGTACATACTGGTCAAACCGGAAGGCAAGGCAAAGCACCGCACGCCCTAGCGCACTTCGGGTGAGGCGGGGGGTTTGGGCGATTTCCTGTATATTTACTTTTTATAAGTACCAAATGCCAATGGTACCAACGCGTGCATGGAAGGAATTGGCATAGATTATATTTAGACCATATGCTAAGCTAGGTAGAACGAGCGCAGTAAACCAATCGAATGCTCTGTGTGTACGCGTGTGTGTTGCCATCGTTGTCCGTGCGTCAGATGCGTGGAAGCTCACCTAACGCCGCGCCA ]
[-] EMBL AGA280274 [ AGGAATTGGCATAGATTATATTTGGCCCATATGCTAAGCGAGGTAGAACGAGCGCAGTAAACCAATCGAATGCTCTGTGTGTACGCGTGTGTGTTGCCATCGTTGTCCGTGCGTCAGATGCGTGGAAGCTCACCTAACGCCGCGCCACAAAGCAAATCACAAGCTGTGTGCAGTTCTTCTGCACCTTAGGATAGAAAGGGAAAATTATAGTATATTTACTTCGTTAGTAAAATATTCAAACAAAACCTTTGAGCCTGTTTACGTTGAATTTAATTTTCACGAACTGAATTATTCACCATTGTACAATAGTTCACTGAGCAATAGTTTCTTCAGGTTAAATAAAAATAAACCCTGAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4903#0 CGAGCAGAACCGGCTCGAGTTTGCGGTGTAGATACTCGAGCAGGGCTTCTACACGGTGCC 60
consensus_4903#1 ------------------------------------------------------------
consensus_4903#0 GGTGTACAAGCAGCGCGAACCGACGCCCCCGCCCGACTACCTCGCCGCGGAGCGGGCGAT 120
consensus_4903#1 ------------------------------------------------------------
consensus_4903#0 GATGCCGGGCCCGATGGACATCGGGGACGACGCGCTCCGGCCGATCACGAGCAGCGAGTG 180
consensus_4903#1 ------------------------------------------------------------
consensus_4903#0 CCGGTTTCTGGTGCGCTTCCTCTACCAGCTCAGCAGCAAGCTGAACGTGATGTTCGGCGA 240
consensus_4903#1 ------------------------------------------------------------
consensus_4903#0 CGACCTGCAGCGGCTGTGGCACCGGGACGGGCTCGTCGGCCGGCTGGCGCGCCGCACGCT 300
consensus_4903#1 -----------------GGCACCGGGACGGGCTCGTCGGCCGGCTGGCGCGCCGCACGCT 43
*******************************************
consensus_4903#0 CGAGCCGCCCACCACCATCTCGGAGTTTACCCGCATGCCGATCTGCACGCACGGCTCGAA 360
consensus_4903#1 CGAGCCGCCCACCACCATCTCGGAGTTTACCCGCATGCCGATCTGCACGCACGGCTCGAA 103
************************************************************
consensus_4903#0 AACGCTCGTTCGGACGAAGGTGGGCCCGCGCATCAGCCTGCGCTTTCTTGCCTCCTACAC 420
consensus_4903#1 AACGCTCGTACGGACGAAGGTGGGCCCGCGCATCAGCCTGCGCTTTCTTGCCTCCTACAC 163
********* **************************************************
consensus_4903#0 CTCGATCGTCACCGTCAGCTGCTCGTTCCTGGCCGGCTACCTTTTGTTCGGCACGCCGAG 480
consensus_4903#1 CTCGATCGTCACCGTCAGCTGCTCGTTCCTGGCCGGCTACCTTTTGTTCGGCACGCCGAG 223
************************************************************
consensus_4903#0 CTACGGCTTTATCGCCCTGCTGCTGGTGGCGTTCCTGTACATACTGGTCAAACCGGAAGG 540
consensus_4903#1 CTACGGCTTTATCGCCCTGCTGCTGGTGGCGTTCCTGTACATACTGGTCAAACCGGAAGG 283
************************************************************
consensus_4903#0 CAAGGCAAAGCACCGCACGCCCTAGCGCACTTCGAGTGAGGCGGGGGGTCTGGGCGATTT 600
consensus_4903#1 CAAGGCAAAGCACCGCACGCCCTAGCGCACTTCGGGTGAGGCGGGGGGTTTGGGCGATTT 343
********************************** ************** **********
consensus_4903#0 CCTGTATATTTACTTTTTATAAGTACCAAATGCCAATGGTACCAACGCGTGCATGGAAGG 660
consensus_4903#1 CCTGTATATTTACTTTTTATAAGTACCAAATGCCAATGGTACCAACGCGTGCATGGAAGG 403
************************************************************
consensus_4903#0 AATTGGCATAGATTATATTTAGACCATATGCTAAGCGAGGTAGAACGAGCGCAGTAAACC 720
consensus_4903#1 AATTGGCATAGATTATATTTAGACCATATGCTAAGCTAGGTAGAACGAGCGCAGTAAACC 463
************************************ ***********************
consensus_4903#0 AATCGAATGCTCTGTGTGTACGCGTGTGTGTTGCCATCGTTGTCCGTGCGTCAGATGCGT 780
consensus_4903#1 AATCGAATGCTCTGTGTGTACGCGTGTGTGTTGCCATCGTTGTCCGTGCGTCAGATGCGT 523
************************************************************
consensus_4903#0 GGAAGCTCACCT------------------------------GTGTGCAGTTCTTCTGCA 810
consensus_4903#1 GGAAGCTCACCTAACGCCGCGCCACAAAGCAAATCACAAGCTGTGTGCAGTTCTTCTGCA 583
************ ******************
consensus_4903#0 CC---------------------------------------------------------- 812
consensus_4903#1 CCTTAGGATAGAAAGGGAAAATTATAGTATATTTACTTCGTTAGTAAAATATTCAAACAA 643
**
consensus_4903#0 ------------------------------------------------------------
consensus_4903#1 AACCTTTGAGCCTGTTTACGTTGAATTTAATTTTCACGAACTGAATTATTCACCATTGTA 703
consensus_4903#0 -----------------------------------------------------------
consensus_4903#1 CAATAGTTCACTGAGCAATAGTTTCTTCAGGTTAAATAAAAATAAACCCTGAAAAAAAA 762
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||