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Anopheles gambiae
cluster # 5117 cluster # 5117       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5117#0 length = 1005 sequences # 4  

consensusID : consensus_5117#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1005
fasta sequence
                              [CAGAATCGNCACGAGGATCAAAGCGAAGAAAAGCAAACGAAAAGCAAGTTGAACGAACAGATGGCGCAAATGTACGGGCGGCAAGTGTGTGATCATCGACAATGTAACCATGTATAGCAACATATTTGTAGGAAAAAGGAGGGTTTCAGATTTCTGGGTTTTTTTTTTCTTCTTTTTGTTTCCCACAACAAAAGGAAAAAAAGCAAATAGCAAAAGCTCCTATTATATTCGCGCGACTCCGGCGGAAGGCACAGAGCGTCGCTGCGATACGCCCGATACATTGGCTGCAGGAAAAGGGGTTTTCTTTCCCCCATTGCTGTGTGAATGAATTTGTCGACGAGTCTCTTATGTTCTTATTAGCATTAGAAGTGCGGGGTGCACAAGCCGCCCCGCCCGC-CCCTCCCCGC-GGGGGGTGGGGGGAAACTCCCAACTCCCAGCTGGTGT-GAAAGGTGCAAAATGCGACGCAAGCATCGCTAGCGCTGCGATGTACAGAGGAGTAGGGAGACTAGATAAAGCAAATGTGTTTATATAGGGAAAAAACAAACAAACAAACGTGTAAAACACCTCTCTCCCTCTTCCCCTTAATCAACCCCTCCCCCCCCCCCCCCTTCACTCACCGAACAAAGATCTCTCCTAATCACGCCTCGCGTCGTGTTGTGGCAGCACTGTACAAGGTGCAACGAAATTCTATTACTGATGCCGACAAAAGGAGCAAAACAGAGGAAAGGAGGCGAAGAAGAAAATGTGTTATTTTGCAAAGCGGGAAAGTATAACGGACGGTTCTGAAGCAAGGGGAGAAGGGGTGAGAGAGGGGGTAGGGCAGTATATGTGACAAAAACAAACAAGGACAAAAAGAAGAGAGAACATTAAGAAAACGATGCAACAAGTCCAATTTCTAGTGATTGTTTAGGCAAATAAGAGAGAAAGAGAGAGAGGGAGAGAGTGAGAGGGGTCAACCGCAAAACAAATGGGAAATGTGAGTGATTTTGAACATGTTCGTTTAGT]

[+] EMBL BX467385             [CAGAATCGNCACGAGGATCAAAGCGAAGAAAAGCAAACGAAAAGCAAGTTGAACGAACAGATGGCGCAAATGTACGGGCGGCAAGTGTGTGATCATCGACAATGTAACCATGTATAGCAACATATTTGTAGGAAAAAGGAGGGTTTCAGATTTCTGGGTTTTTTTTTTCTTCTTTTTGTTTCCCACAACAAAAGGAAAAAAAGCAAATAGCAAAAGCTCCTATTATATTCGCGCGACTCCGGCGGAAGGCACAGAGCGTCGCTGCGATACGCCCGATACATTGGCTGCAGGAAAAGGGGTTTTCTTTCCCCCATTGCTGTGTGAATGAATTTGTCGACGAGTCTCTTATGTTCTTATTAGCATTAGAAGTGCGGGGTGCACAAGCCGCCCCGCCCGCACCCTCCCCGCAGGGGGGTGGGGGGAAACTCCCAACTCCCAGCTGGTGTCGAAAGGTGCAAAATGCGACGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX605212             [                                       AAAAGCAAGTTGAACGAACAGATGGCGCAAATGTACGGGCGGCAAGTGTGTGATCATCGACAATGTAACCATGTATAGCAACATATTTGTAGGAAAAAGGAGGGTTTCAGATTTCTGGGTTTTTTTTTTCTTCTTTTTGTTTCCCACAACAAAAGGAAAAAAAGCAAATAGCAAAAGCTCCTATTATATTCGCGCGACTCCGGCGGAAGGCACAGAGCGTCGCTGCGATACGCCCGATACATTGGCTGCAGGAAAAGGGGTTTTCTTTCCCCCATTGCTGTGTGAATGAATTTGTCGACGAGTCTCTTATGTTCTTATTAGCATTAGAAGTGCGGGGTGCACAAGCCGCCCCGCCCGC CCCTCCCCGC GGGGGGTGGGGTGAAACTCCCAACTCCCAGCTGGTGT GAAAGGTGCAAAATGCGACGCAAGCATCGCTAGCGCTGCGATGTACAGAGGAGTAGGGAGACTAGATAAAGCAAATGTGTTTATATAGGGAAAAAACAAACAAACAAACGTGTAAAACACCTCTCTCCCTCTTCCCCTTAATCAACCCCTCCCCCCCCCCCCCCTTCACTCACCGAACAAAGATCTCTCCT                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX606190             [                                                                                                                                                                                                                         TCCTATTATATTCGCGCGACTCCGGCGGAAGGCACAGAGCGTCGCTGCGATACGCCCGATACATTGGCTGCAGGAAAAGGGGTTTTCTTTCCCCCATTGCTGTGTGAATGAATTTGTCGACGAGTCTCTTATGTTCTTATTAGCATTAGAAGTGCGGGGTGCACAAGCCGCCCCGCCCGC CCCTCCCCGC GGGGGGTGGGGGGAAACTCCCAACTCCCAGCTGGTGT GAAAGGTGCAAAATGCGACGCAAGCATCGCTAGCGCTGCGATGTACAGAGGAGTAGGGAGACTAGATAAAGCAAATGTGTTTATATAGGGAAAAAACAAACAAACAAACGTGTAAAACACCTCTCTCCCTCTTCCCCTTAATCAACCCCTCCCCCCCCCCCCCCTTCACTCACCGAACAAAGATCTCTCCTAATCACGCCTCGCGTCGTGTTGTGGCAGCACTGTACAAGGTGCAACGAAATTCTATTACTGATGCCGACAAAAGGAGCAAAACAGAGGAAAGGAGGCGAAGAAGAAAATGTGTTATTTTGCAAAGCGGGAAAGTATAACGGACGGTTCTGAAGCAAGGGGAGAAGGGGTGAGAGAGGGGGTAGGGCAGTATATGTGACAAAAACAAACAAGGACAAAAAGAAGAGAGAACATTAAGAAAACGATGCAACAAGTCCAATTTCTAGTGATTGTTTAGGCAAATAA                                                                                       ]
[+] EMBL BM635788             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ccgCTCGCGTCGTGTTGTGGCAGCACTGTACAAGGTGCAACGAAATTCTATTACTGATGCCGACAAAAGGAGCAAAACAGAGGAAAGGAGGCGAAGAAGAAAATGTGTTATTTTGCAAAGCGGGAAAGTATAACGGACGGTTCTGAAGCAAGGGGAGAAGGGGTGAGAGAGGGGGTAGGGCAGTATATGTGACAAAAACAAACAAGGACAAAAAGAAGAGAGAACATTAAGAAAACGATGCAACAAGTCCAATTTCTAGTGATTGTTTAGGCAAATAAGAGAGAAAGAGAGAGAGGGAGAGAGTGAGAGGGGTCAACCGCAAAACAAATGGGAAATGTGAGTGATTTTGAACATGTTCGTTTAGT]


>consensus_5117#0 CAGAATCGNCACGAGGATCAAAGCGAAGAAAAGCAAACGAAAAGCAAGTTGAACGAACAG ATGGCGCAAATGTACGGGCGGCAAGTGTGTGATCATCGACAATGTAACCATGTATAGCAA CATATTTGTAGGAAAAAGGAGGGTTTCAGATTTCTGGGTTTTTTTTTTCTTCTTTTTGTT TCCCACAACAAAAGGAAAAAAAGCAAATAGCAAAAGCTCCTATTATATTCGCGCGACTCC GGCGGAAGGCACAGAGCGTCGCTGCGATACGCCCGATACATTGGCTGCAGGAAAAGGGGT TTTCTTTCCCCCATTGCTGTGTGAATGAATTTGTCGACGAGTCTCTTATGTTCTTATTAG CATTAGAAGTGCGGGGTGCACAAGCCGCCCCGCCCGCCCCTCCCCGCGGGGGGTGGGGGG AAACTCCCAACTCCCAGCTGGTGTGAAAGGTGCAAAATGCGACGCAAGCATCGCTAGCGC TGCGATGTACAGAGGAGTAGGGAGACTAGATAAAGCAAATGTGTTTATATAGGGAAAAAA CAAACAAACAAACGTGTAAAACACCTCTCTCCCTCTTCCCCTTAATCAACCCCTCCCCCC CCCCCCCCTTCACTCACCGAACAAAGATCTCTCCTAATCACGCCTCGCGTCGTGTTGTGG CAGCACTGTACAAGGTGCAACGAAATTCTATTACTGATGCCGACAAAAGGAGCAAAACAG AGGAAAGGAGGCGAAGAAGAAAATGTGTTATTTTGCAAAGCGGGAAAGTATAACGGACGG TTCTGAAGCAAGGGGAGAAGGGGTGAGAGAGGGGGTAGGGCAGTATATGTGACAAAAACA AACAAGGACAAAAAGAAGAGAGAACATTAAGAAAACGATGCAACAAGTCCAATTTCTAGT GATTGTTTAGGCAAATAAGAGAGAAAGAGAGAGAGGGAGAGAGTGAGAGGGGTCAACCGC AAAACAAATGGGAAATGTGAGTGATTTTGAACATGTTCGTTTAGT



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)