cluster # 5155

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Anopheles gambiae
cluster # 5155 cluster # 5155 Sequences # 4 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5155#0 length = 815 sequences # 1
consensus_5155#1 length = 566 sequences # 1

consensus_5155#2 length = 559 sequences # 1
consensus_5155#3 length = 420 sequences # 1

consensusID : consensus_5155#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 815
fasta sequence

                              [CCTGCGCGAGCATCAGCCGCGCGTGCTGGAAACCCTGTCCGGGCTGCTGAACGTGCCCAAGATGATCAAGGAGGCGCACACGAAGGGTGCGGTCGTCTATCTGCTCGATCTGTTCTGCAACTCCAACAACCCGGCGATACGGGAACAGTGTGCCGAGCTGCTGGCGAAGATGAACGCGGACAAGCTGAGCGGGCCGAAGGTGCGCATCACGCTGTGCAAGTATCTGCCGCCCGTCTTCCTGGACGCGATGATCGACTCCACCTCGGTGGCGGTGCAGATGTACGAGTCGACGCACGANCACCCGGAGCTGATCTGGAACGACGACATCCGGGCGTGCGTGTCGGACGCGGTGCGCGACGCGGCGGACAGCTTCCACGTGCAGCAGCGGCGCAACGCCAAGGCGGCCTGGCGCGATCCGGAGATACTGCCCGAGCTGCTGTCGAGCGAGGTGGTCGTGTCGGGCGTGTACTTGCGCCTGTACGTGTCCAATCCGGGCTGGACGCTGCGCAAACCGAAACAGTTCCTGGCCGACCTGCTGGACTTCATCGTGGACAGTATCAGCCGGAGCGGCATGGACAGGGACGTGCTGGATCTGGCCACGACCGCNCTGGTGCTGCTGCTGAACGCACAGCCCAACCTGGCCGACTCGATACCGGTGCTGGGGCACATACCGAAGTTTTTCCGCCAGCTTTCCGTTCAGCCAAAGAGTGCCCTCACAGTATTGCATCAGTTTTCCCTTTCGGAGATCTGTGTCAGCGCAATCTCCCAAACGGAATGTATACCGTCGTTGAAATCTTGCATGGAGCACCATCGGG]

[+] EMBL BX625653             [CCTGCGCGAGCATCAGCCGCGCGTGCTGGAAACCCTGTCCGGGCTGCTGAACGTGCCCAAGATGATCAAGGAGGCGCACACGAAGGGTGCGGTCGTCTATCTGCTCGATCTGTTCTGCAACTCCAACAACCCGGCGATACGGGAACAGTGTGCCGAGCTGCTGGCGAAGATGAACGCGGACAAGCTGAGCGGGCCGAAGGTGCGCATCACGCTGTGCAAGTATCTGCCGCCCGTCTTCCTGGACGCGATGATCGACTCCACCTCGGTGGCGGTGCAGATGTACGAGTCGACGCACGANCACCCGGAGCTGATCTGGAACGACGACATCCGGGCGTGCGTGTCGGACGCGGTGCGCGACGCGGCGGACAGCTTCCACGTGCAGCAGCGGCGCAACGCCAAGGCGGCCTGGCGCGATCCGGAGATACTGCCCGAGCTGCTGTCGAGCGAGGTGGTCGTGTCGGGCGTGTACTTGCGCCTGTACGTGTCCAATCCGGGCTGGACGCTGCGCAAACCGAAACAGTTCCTGGCCGACCTGCTGGACTTCATCGTGGACAGTATCAGCCGGAGCGGCATGGACAGGGACGTGCTGGATCTGGCCACGACCGCNCTGGTGCTGCTGCTGAACGCACAGCCCAACCTGGCCGACTCGATACCGGTGCTGGGGCACATACCGAAGTTTTTCCGCCAGCTTTCCGTTCAGCCAAAGAGTGCCCTCACAGTATTGCATCAGTTTTCCCTTTCGGAGATCTGTGTCAGCGCAATCTCCCAAACGGAATGTATACCGTCGTTGAAATCTTGCATGGAGCACCATCGGG]




>consensus_5155#0
CCTGCGCGAGCATCAGCCGCGCGTGCTGGAAACCCTGTCCGGGCTGCTGAACGTGCCCAA
GATGATCAAGGAGGCGCACACGAAGGGTGCGGTCGTCTATCTGCTCGATCTGTTCTGCAA
CTCCAACAACCCGGCGATACGGGAACAGTGTGCCGAGCTGCTGGCGAAGATGAACGCGGA
CAAGCTGAGCGGGCCGAAGGTGCGCATCACGCTGTGCAAGTATCTGCCGCCCGTCTTCCT
GGACGCGATGATCGACTCCACCTCGGTGGCGGTGCAGATGTACGAGTCGACGCACGANCA
CCCGGAGCTGATCTGGAACGACGACATCCGGGCGTGCGTGTCGGACGCGGTGCGCGACGC
GGCGGACAGCTTCCACGTGCAGCAGCGGCGCAACGCCAAGGCGGCCTGGCGCGATCCGGA
GATACTGCCCGAGCTGCTGTCGAGCGAGGTGGTCGTGTCGGGCGTGTACTTGCGCCTGTA
CGTGTCCAATCCGGGCTGGACGCTGCGCAAACCGAAACAGTTCCTGGCCGACCTGCTGGA
CTTCATCGTGGACAGTATCAGCCGGAGCGGCATGGACAGGGACGTGCTGGATCTGGCCAC
GACCGCNCTGGTGCTGCTGCTGAACGCACAGCCCAACCTGGCCGACTCGATACCGGTGCT
GGGGCACATACCGAAGTTTTTCCGCCAGCTTTCCGTTCAGCCAAAGAGTGCCCTCACAGT
ATTGCATCAGTTTTCCCTTTCGGAGATCTGTGTCAGCGCAATCTCCCAAACGGAATGTAT
ACCGTCGTTGAAATCTTGCATGGAGCACCATCGGG

consensusID : consensus_5155#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 566
fasta sequence

                              [GCCAGATCGCACGAGGTGTCAACCTCACGTACGGCGATCGGGCTCACGCATCTGCTCAACCAGTACCCGATCTGGGCGGAGTACCGTGACCAGAAGCACGATCTCTTCATAACCGATACGGACGTGCGCGGATATCTAATGGGCGCACCGAACACGACCGCTGGCTATTTGACGCAAGGGCCGGCAAAGAACGTCGAAGTGCTCACTTCGCCACCGGNCCATCGATCGGGATGATCCACTGTTTGCGCGCAGCAACAGCAGCGGTGGGAGTGTGTAGTAGTACGCACACGTGCTACTGTACCCTACCGTGCACCCCGCGGGAGTAGTCCCATTATTTGTTATATATGGGGTGTACGCGTATTGTTTCGTTTTTTCTGTTCGGTTGGANATCGTTTCCCGTGGTGGACCAGTGCGTGTACATTTGGTAAGGGTAGGTGTGGTGGCATTTACAGNATGNTGGATGGAAAAGACAGGTGGAGGCCCAATACGTTTGCGTTAGCCAACNTTCNCNGCGTAGCCACACGNGAAGCGGCATGNGGAGGCCAACAATTGGGGTCCGGCTTAAT]

[+] EMBL BX469181             [GCCAGATCGCACGAGGTGTCAACCTCACGTACGGCGATCGGGCTCACGCATCTGCTCAACCAGTACCCGATCTGGGCGGAGTACCGTGACCAGAAGCACGATCTCTTCATAACCGATACGGACGTGCGCGGATATCTAATGGGCGCACCGAACACGACCGCTGGCTATTTGACGCAAGGGCCGGCAAAGAACGTCGAAGTGCTCACTTCGCCACCGGNCCATCGATCGGGATGATCCACTGTTTGCGCGCAGCAACAGCAGCGGTGGGAGTGTGTAGTAGTACGCACACGTGCTACTGTACCCTACCGTGCACCCCGCGGGAGTAGTCCCATTATTTGTTATATATGGGGTGTACGCGTATTGTTTCGTTTTTTCTGTTCGGTTGGANATCGTTTCCCGTGGTGGACCAGTGCGTGTACATTTGGTAAGGGTAGGTGTGGTGGCATTTACAGNATGNTGGATGGAAAAGACAGGTGGAGGCCCAATACGTTTGCGTTAGCCAACNTTCNCNGCGTAGCCACACGNGAAGCGGCATGNGGAGGCCAACAATTGGGGTCCGGCTTAAT]




>consensus_5155#1
GCCAGATCGCACGAGGTGTCAACCTCACGTACGGCGATCGGGCTCACGCATCTGCTCAAC
CAGTACCCGATCTGGGCGGAGTACCGTGACCAGAAGCACGATCTCTTCATAACCGATACG
GACGTGCGCGGATATCTAATGGGCGCACCGAACACGACCGCTGGCTATTTGACGCAAGGG
CCGGCAAAGAACGTCGAAGTGCTCACTTCGCCACCGGNCCATCGATCGGGATGATCCACT
GTTTGCGCGCAGCAACAGCAGCGGTGGGAGTGTGTAGTAGTACGCACACGTGCTACTGTA
CCCTACCGTGCACCCCGCGGGAGTAGTCCCATTATTTGTTATATATGGGGTGTACGCGTA
TTGTTTCGTTTTTTCTGTTCGGTTGGANATCGTTTCCCGTGGTGGACCAGTGCGTGTACA
TTTGGTAAGGGTAGGTGTGGTGGCATTTACAGNATGNTGGATGGAAAAGACAGGTGGAGG
CCCAATACGTTTGCGTTAGCCAACNTTCNCNGCGTAGCCACACGNGAAGCGGCATGNGGA
GGCCAACAATTGGGGTCCGGCTTAAT

consensusID : consensus_5155#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 559
fasta sequence

                              [AATCCCCGAGGTTATCTAGTAGCTGGTTCCTCCGAAGTCCTTTCGGAGATCTGTGTCAGCGCAATCTCCCAAACGGAATGTATACCGTCGTTGAAATCTTGCATGGAGCACCATCGGGATCTGACGTCGACGGCGTGCGAAACGTTGAGTCGATTATTCAAATGTCAGCATGATTCACTGATACGTCAATCACTCGAGTGTCAATTAATTCCCTACCTGGTCGCGCTGCTCGACAGCCGGCTCGTGCTGGCGAACAATCCGGCCATGGTGAAGGCGCAGATTGTTGCCACGCTGAAAGCGATGAGCGCCAAACTCACGTACGGCGATCGGGTCACGCATCTGTCAACCAGTACCCGATCTGGGCGGAGTACCGTGACCAGAAGCACGATCTCTTCATAACCGATACGGACGTGCGCGGATATCTAATGGGCGCACCGAATACGACCGCTGGCTATTTGACGCAAGGGCCGGCAAAGAACGTCGAAGTGCTCACTTCGCACCGCCATCGATCGCGATGATCCACTATTTGCGCGCAGCAACAGCAGCGGTGGGAGTGTGT]

[+] EMBL AL694372             [AATCCCCGAGGTTATCTAGTAGCTGGTTCCTCCGAAGTCCTTTCGGAGATCTGTGTCAGCGCAATCTCCCAAACGGAATGTATACCGTCGTTGAAATCTTGCATGGAGCACCATCGGGATCTGACGTCGACGGCGTGCGAAACGTTGAGTCGATTATTCAAATGTCAGCATGATTCACTGATACGTCAATCACTCGAGTGTCAATTAATTCCCTACCTGGTCGCGCTGCTCGACAGCCGGCTCGTGCTGGCGAACAATCCGGCCATGGTGAAGGCGCAGATTGTTGCCACGCTGAAAGCGATGAGCGCCAAACTCACGTACGGCGATCGGGTCACGCATCTGTCAACCAGTACCCGATCTGGGCGGAGTACCGTGACCAGAAGCACGATCTCTTCATAACCGATACGGACGTGCGCGGATATCTAATGGGCGCACCGAATACGACCGCTGGCTATTTGACGCAAGGGCCGGCAAAGAACGTCGAAGTGCTCACTTCGCACCGCCATCGATCGCGATGATCCACTATTTGCGCGCAGCAACAGCAGCGGTGGGAGTGTGT]




>consensus_5155#2
AATCCCCGAGGTTATCTAGTAGCTGGTTCCTCCGAAGTCCTTTCGGAGATCTGTGTCAGC
GCAATCTCCCAAACGGAATGTATACCGTCGTTGAAATCTTGCATGGAGCACCATCGGGAT
CTGACGTCGACGGCGTGCGAAACGTTGAGTCGATTATTCAAATGTCAGCATGATTCACTG
ATACGTCAATCACTCGAGTGTCAATTAATTCCCTACCTGGTCGCGCTGCTCGACAGCCGG
CTCGTGCTGGCGAACAATCCGGCCATGGTGAAGGCGCAGATTGTTGCCACGCTGAAAGCG
ATGAGCGCCAAACTCACGTACGGCGATCGGGTCACGCATCTGTCAACCAGTACCCGATCT
GGGCGGAGTACCGTGACCAGAAGCACGATCTCTTCATAACCGATACGGACGTGCGCGGAT
ATCTAATGGGCGCACCGAATACGACCGCTGGCTATTTGACGCAAGGGCCGGCAAAGAACG
TCGAAGTGCTCACTTCGCACCGCCATCGATCGCGATGATCCACTATTTGCGCGCAGCAAC
AGCAGCGGTGGGAGTGTGT

consensusID : consensus_5155#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 420
fasta sequence

                              [CAGATCGCACGAGGTGTACATGGAGCACATCGGGATCTCGACGTCGACGGCGTGCGAAACGTTGAGTCGATTATTCAAATGTCAGCATGATTCACTGATACGTCAATCACTCGAGTGTCAATTAATTCCCTACCTGGTCGCGCTGCTCGACAGCCGGCTCGTGCTGGCGAACAATCCGGCCATGGGTGAAGGCGCAGATTGTTGCCACGCTGAAAGCGATGAGCGCCAACCTCACGGTACGGCGATCGGGTCACGCATCTGCCTCAACCAGTACCCGATCTGGGCGGAGTACCGTGACCAGAAGCACGATACTCTTCATAACCGATACGGACGTGCGCGGATATCTAATGGGCGCACCGACAGTACGACCGCCTGGACTATTTGACGCAAGGGCCGGCAAAGAACGTCGAAGTGCTCACT]

[+] EMBL BX469491             [CAGATCGCACGAGGTGTACATGGAGCACATCGGGATCTCGACGTCGACGGCGTGCGAAACGTTGAGTCGATTATTCAAATGTCAGCATGATTCACTGATACGTCAATCACTCGAGTGTCAATTAATTCCCTACCTGGTCGCGCTGCTCGACAGCCGGCTCGTGCTGGCGAACAATCCGGCCATGGGTGAAGGCGCAGATTGTTGCCACGCTGAAAGCGATGAGCGCCAACCTCACGGTACGGCGATCGGGTCACGCATCTGCCTCAACCAGTACCCGATCTGGGCGGAGTACCGTGACCAGAAGCACGATACTCTTCATAACCGATACGGACGTGCGCGGATATCTAATGGGCGCACCGACAGTACGACCGCCTGGACTATTTGACGCAAGGGCCGGCAAAGAACGTCGAAGTGCTCACT]




>consensus_5155#3
CAGATCGCACGAGGTGTACATGGAGCACATCGGGATCTCGACGTCGACGGCGTGCGAAAC
GTTGAGTCGATTATTCAAATGTCAGCATGATTCACTGATACGTCAATCACTCGAGTGTCA
ATTAATTCCCTACCTGGTCGCGCTGCTCGACAGCCGGCTCGTGCTGGCGAACAATCCGGC
CATGGGTGAAGGCGCAGATTGTTGCCACGCTGAAAGCGATGAGCGCCAACCTCACGGTAC
GGCGATCGGGTCACGCATCTGCCTCAACCAGTACCCGATCTGGGCGGAGTACCGTGACCA
GAAGCACGATACTCTTCATAACCGATACGGACGTGCGCGGATATCTAATGGGCGCACCGA
CAGTACGACCGCCTGGACTATTTGACGCAAGGGCCGGCAAAGAACGTCGAAGTGCTCACT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5155#2      ------------------------------------------------------------
consensus_5155#3      ------------------------------------------------------------
consensus_5155#1      ------------------------------------------------------------
consensus_5155#0      CCTGCGCGAGCATCAGCCGCGCGTGCTGGAAACCCTGTCCGGGCTGCTGAACGTGCCCAA 60
                                                                                  

consensus_5155#2      -------------AATCCCCGAGGTTATCTAGTAGCTGGTTCCTCCGAAGTCCTTTCGGA 47
consensus_5155#3      ------------------------------------------------------------
consensus_5155#1      --------------------------GCCAGATCGCACGAGGTGTCAACCTCACGTACGG 34
consensus_5155#0      GATGATCAAGGAGGCGCACACGAAGGGTGCGGTCGTCTATCTGCTCGATCTGTTCTGCAA 120
                                                                                  

consensus_5155#2      GATCTGTGTCAGCGCAATCTCCCAAACGGAATGT-ATACCGTCGTTGAAATCTTGCATGG 106
consensus_5155#3      -------------------------------------CAGATCGCACGAGGTGTACATGG 23
consensus_5155#1      CGATCGGGCTCACGCATCTGCTCAACCAGTACCCGATCTGGGCGGAGTACCGTGACCAGA 94
consensus_5155#0      CTCCAACAACCCGGCGAT-ACGGGAACAGTGTGCCGAGCTGCTGGCGAAGATGAACGCGG 179
                                                                 *    *      *  * 

consensus_5155#2      AGCA--CCATCGGGATCT-GACGTCGACGGCG-TGCG-AAACGTTGAGTCGATTATTCAA 161
consensus_5155#3      AGCA--C-ATCGGGATCTCGACGTCGACGGCG-TGCG-AAACGTTGAGTCGATTATTCAA 78
consensus_5155#1      AGCA--CGATCTCTTCATAACCGATACGGACG-TGCGCGGATATCTAATGGGCGCACCGA 151
consensus_5155#0      ACAAGCTGAGCGGGCCGAAGGTGCGCATCACGCTGTGCAAGTATCT-GCCGCCCGTCTTC 238
                      *  *    * *           *       ** ** *      *      *         

consensus_5155#2      ATGTCAGCA-TGATTCACT--GATACGTCAATCACTCGAG--TGTCAATTAATTCCCTAC 216
consensus_5155#3      ATGTCAGCA-TGATTCACT--GATACGTCAATCACTCGAG--TGTCAATTAATTCCCTAC 133
consensus_5155#1      ACACGACCGCTGGCTATTT--GACGCAAGGGCCGGCAAAGAACGTCGAAGTGCTCACTTC 209
consensus_5155#0      CTGGACGCGATGATCGACTCCACCTCGGTGGCGGTGCAGATGTACGAGTCGACGCACGAN 298
                             *  **      *      *                            * *   

consensus_5155#2      CTGGTCGCGCTGCTCGACAGCCGGCTCG--TGCTGGCGAACAATCCGGCCATGG-TGAAG 273
consensus_5155#3      CTGGTCGCGCTGCTCGACAGCCGGCTCG--TGCTGGCGAACAATCCGGCCATGGGTGAAG 191
consensus_5155#1      GCCACCGGNCCATCGATCGGGATGATCCACTGTTTGCGCGCAGCAACAGCAGCGGTGGGA 269
consensus_5155#0      CACCCGGAGCTGATCTGGAACGACGACA--TCCGGGCGTGCGTGTCGGACGCGGTGCGCG 356
                            *  *                *   *    ***  *        *   *      

consensus_5155#2      GCGCAGATTGTTGC-CACGCTGAAAGCGATG----AGCGCCAAACTCACG-TACGGCGAT 327
consensus_5155#3      GCGCAGATTGTTGC-CACGCTGAAAGCGATG----AGCGCCAACCTCACGGTACGGCGAT 246
consensus_5155#1      GTGTGTAGTAGTACGCACACGTGCTACTGTACCCTACCGTGCACCCCGCG--GGAGTAGT 327
consensus_5155#0      ACGCGGCGGACAGCTTCCACGTGCAGCAGCGGCGCAACGCCAAGGCGGCC-TGGCGCGAT 415
                        *          *   * *      *        * **   *     *      *   *

consensus_5155#2      CGGGTCACGCATCTG--TCAACCAGTACCCGATCTGGGCG-GAGTACCGTGACCAGAAGC 384
consensus_5155#3      CGGGTCACGCATCTGCCTCAACCAGTACCCGATCTGGGCG-GAGTACCGTGACCAGAAGC 305
consensus_5155#1      CCCATTATTTGTTATATATGGGGTGTACGCGTATTGTTTC-GTTTTTTCTGTTCGGTTGG 386
consensus_5155#0      CCGGAGATACTGCCCGAGCTGCTGTCGAGCGAGGTGGTCGTGTCGGGCGTGTACTTGCGC 475
                      *     *                      **   **     *       **  *    * 

consensus_5155#2      ACGAT-CTCTTCATAACCGATACGGACG-TGCGCGGATATCTAA------TGGGCGCACC 436
consensus_5155#3      ACGATACTCTTCATAACCGATACGGACG-TGCGCGGATATCTAA------TGGGCGCACC 358
consensus_5155#1      ANATCGTTTCCCGTGGTGGACCAGTGCG-TGTACATTTGGTAAGGG----TAGGTGTGGT 441
consensus_5155#0      CTGTACGTGTCCA-ATCCGGGCTGGACGCTGCGCAAACCGAAACAGTTCCTGGCCGACCT 534
                             *   *      *    *  ** **  *        *       * *  *    

consensus_5155#2      GA---ATACGACCGCT--GGCTATTTGACGCAAGGGCC-GGCAAAGAACGTCGAAGTGCT 490
consensus_5155#3      GACA-GTACGACCGCCTGGACTATTTGACGCAAGGGCC-GGCAAAGAACGTCGAAGTGCT 416
consensus_5155#1      GGCA-TTTACAGNATGNTGGATGGAAAAGACAGGTGGA-GGCCCAATACGTT--TGCGTT 497
consensus_5155#0      GCTGGACTTCATCGTGGACAGTATCAGCCGGAGCGGCATGGACAGGGACGTGCTGGATCT 594
                      *         *          *         *   *   **      ****    *   *

consensus_5155#2      CACTTCG--CACCGCCATCGATCGCGATGATCCACTATTTGCGCGCAGCAAC--AGCAGC 546
consensus_5155#3      CACT-------------------------------------------------------- 420
consensus_5155#1      AGCCAAC--NTTCNCNGCGTAGCCACACGNGAAGCGGCATGNGGAGGCCAAC--AATTGG 553
consensus_5155#0      GGCCACGACCGCNCTGGTGCTGCTGCTGAACGCACAGCCCAACCTGGCCGACTCGATACC 654
                        *                                                         

consensus_5155#2      GGTGGGAGTGTGT----------------------------------------------- 559
consensus_5155#3      ------------------------------------------------------------
consensus_5155#1      GGTCCGGCTTAAT----------------------------------------------- 566
consensus_5155#0      GGTGCTGGGGCACATACCGAAGTTTTTCCGCCAGCTTTCCGTTCAGCCAAAGAGTGCCCT 714
                                                                                  

consensus_5155#2      ------------------------------------------------------------
consensus_5155#3      ------------------------------------------------------------
consensus_5155#1      ------------------------------------------------------------
consensus_5155#0      CACAGTATTGCATCAGTTTTCCCTTTCGGAGATCTGTGTCAGCGCAATCTCCCAAACGGA 774
                                                                                  

consensus_5155#2      -----------------------------------------
consensus_5155#3      -----------------------------------------
consensus_5155#1      -----------------------------------------
consensus_5155#0      ATGTATACCGTCGTTGAAATCTTGCATGGAGCACCATCGGG 815